RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 IGHV6-1A0A0B4J1U7 121 aa11.18□□□□□ -0.62
YBX1-202ENST00000332220 F8W1H4 67 aa11.18□□□□□ -0.62
YBX1-202ENST00000332220 LINC00313P59037 77 aa11.18□□□□□ -0.62
YBX1-202ENST00000332220 A0A1B0GVX0 72 aa11.17□□□□□ -0.62
YBX1-202ENST00000332220 NREPQ16612 68 aa11.17□□□□□ -0.62
YBX1-202ENST00000332220 Q75L30 129 aa11.17□□□□□ -0.62
YBX1-202ENST00000332220 KRTAP16-1A8MUX0 517 aa11.15□□□□□ -0.62
YBX1-202ENST00000332220 C20orf166-AS1Q96NR2 134 aa11.15□□□□□ -0.62
YBX1-202ENST00000332220 A8MUU9 505 aa11.13□□□□□ -0.63
YBX1-202ENST00000332220 ETDBQ3ZM63 59 aa11.13□□□□□ -0.63
YBX1-202ENST00000332220 C8orf87E5RJ46 101 aa11.1□□□□□ -0.63
YBX1-202ENST00000332220 A8MWP4 228 aa11.09□□□□□ -0.63
YBX1-202ENST00000332220 IGKV3D-7A0A0C4DH55 119 aa11.08□□□□□ -0.64
YBX1-202ENST00000332220 NDUFB1O75438 58 aa11.08□□□□□ -0.64
YBX1-202ENST00000332220 Q6ZVQ6 151 aa11.07□□□□□ -0.64
YBX1-202ENST00000332220 A0A1B0GV90 55 aa11.06□□□□□ -0.64
YBX1-202ENST00000332220 ATP11AUNQ6ZP68 121 aa11.06□□□□□ -0.64
YBX1-202ENST00000332220 FAT4Q6V0I7 4981 aa11.05□□□□□ -0.64
YBX1-202ENST00000332220 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
YBX1-202ENST00000332220 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
YBX1-202ENST00000332220 PRR15Q8IV56 129 aa11.02□□□□□ -0.65
YBX1-202ENST00000332220 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
YBX1-202ENST00000332220 BPY2O14599 106 aa11.01□□□□□ -0.65
YBX1-202ENST00000332220 K7EQZ3 153 aa10.99□□□□□ -0.65
YBX1-202ENST00000332220 UBL5Q9BZL1 73 aa10.96□□□□□ -0.65
YBX1-202ENST00000332220 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
YBX1-202ENST00000332220 Q8N9L7 120 aa10.93□□□□□ -0.66
YBX1-202ENST00000332220 KRTAP19-2Q3LHN2 52 aa10.92□□□□□ -0.66
YBX1-202ENST00000332220 Q8N9P0 234 aaPredicted RBP10.91□□□□□ -0.66
YBX1-202ENST00000332220 TMEM254Q8TBM7 123 aa10.87□□□□□ -0.67
YBX1-202ENST00000332220 LCE2AQ5TA79 106 aaPredicted RBP10.86□□□□□ -0.67
YBX1-202ENST00000332220 LCE2CQ5TA81 110 aa10.86□□□□□ -0.67
YBX1-202ENST00000332220 MRPL34Q9BQ48 92 aaKnown RBP10.85□□□□□ -0.67
YBX1-202ENST00000332220 hDV103S1A0JD37 113 aa10.84□□□□□ -0.67
YBX1-202ENST00000332220 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
YBX1-202ENST00000332220 WFDC13Q8IUB5 93 aa10.8□□□□□ -0.68
YBX1-202ENST00000332220 FAM240AA0A1B0GVK7 77 aa10.79□□□□□ -0.68
YBX1-202ENST00000332220 ACYP1P07311 99 aa10.79□□□□□ -0.68
YBX1-202ENST00000332220 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
YBX1-202ENST00000332220 CXCL6P80162 114 aa10.76□□□□□ -0.69
YBX1-202ENST00000332220 NDUFS5O43920 106 aa10.74□□□□□ -0.69
YBX1-202ENST00000332220 HCG22E2RYF7 251 aa10.71□□□□□ -0.69
YBX1-202ENST00000332220 COX6B2Q6YFQ2 88 aa10.71□□□□□ -0.69
YBX1-202ENST00000332220 HRES1P13985 223 aa10.68□□□□□ -0.7
YBX1-202ENST00000332220 MT1HP80294 61 aa10.68□□□□□ -0.7
YBX1-202ENST00000332220 FLGP20930 4061 aaPredicted RBP10.66□□□□□ -0.7
YBX1-202ENST00000332220 SPINK7P58062 85 aa10.65□□□□□ -0.7
YBX1-202ENST00000332220 MPLKIPQ8TAP9 179 aa10.63□□□□□ -0.71
YBX1-202ENST00000332220 ATP5EP2Q5VTU8 51 aa10.62□□□□□ -0.71
YBX1-202ENST00000332220 Q5W150 140 aa10.62□□□□□ -0.71
YBX1-202ENST00000332220 LINC00643Q86TS7 51 aa10.58□□□□□ -0.72
YBX1-202ENST00000332220 J3QR89 54 aa10.55□□□□□ -0.72
YBX1-202ENST00000332220 RBM12B-AS1Q9P1G2 102 aa10.54□□□□□ -0.72
YBX1-202ENST00000332220 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
YBX1-202ENST00000332220 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
YBX1-202ENST00000332220 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
YBX1-202ENST00000332220 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
YBX1-202ENST00000332220 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
YBX1-202ENST00000332220 A0A087WVE0 104 aa10.47□□□□□ -0.73
YBX1-202ENST00000332220 M0R2T5 61 aa10.47□□□□□ -0.73
YBX1-202ENST00000332220 TP53AIP1Q9HCN2 124 aa10.47□□□□□ -0.73
YBX1-202ENST00000332220 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.73
YBX1-202ENST00000332220 KRTAP10-6P60371 365 aaPredicted RBP10.41□□□□□ -0.74
YBX1-202ENST00000332220 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
YBX1-202ENST00000332220 K7ERU9 68 aa10.35□□□□□ -0.75
YBX1-202ENST00000332220 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
YBX1-202ENST00000332220 UQCRQO14949 82 aa10.28□□□□□ -0.76
YBX1-202ENST00000332220 C4orf26Q17RF5 130 aa10.28□□□□□ -0.76
YBX1-202ENST00000332220 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
YBX1-202ENST00000332220 H0Y9P7 68 aa10.22□□□□□ -0.77
YBX1-202ENST00000332220 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
YBX1-202ENST00000332220 OCR1Q9BZK8 76 aa10.22□□□□□ -0.77
YBX1-202ENST00000332220 CYP4F30PQ9H0H9 118 aa10.22□□□□□ -0.77
YBX1-202ENST00000332220 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.77
YBX1-202ENST00000332220 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
YBX1-202ENST00000332220 KRTAP9-8Q9BYQ0 159 aa10.17□□□□□ -0.78
YBX1-202ENST00000332220 IMUPQ9GZP8 106 aa10.17□□□□□ -0.78
YBX1-202ENST00000332220 ATOX1O00244 68 aa10.16□□□□□ -0.78
YBX1-202ENST00000332220 KRTAP3-1Q9BYR8 98 aa10.16□□□□□ -0.78
YBX1-202ENST00000332220 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
YBX1-202ENST00000332220 C1orf64Q8NEQ6 169 aa10.13□□□□□ -0.79
YBX1-202ENST00000332220 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
YBX1-202ENST00000332220 LINC00208Q96KT6 92 aa10.09□□□□□ -0.79
YBX1-202ENST00000332220 MT2AP02795 61 aa10.08□□□□□ -0.8
YBX1-202ENST00000332220 MP68P56378 58 aa10.06□□□□□ -0.8
YBX1-202ENST00000332220 C5orf47Q569G3 176 aa10.05□□□□□ -0.8
YBX1-202ENST00000332220 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
YBX1-202ENST00000332220 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
YBX1-202ENST00000332220 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
YBX1-202ENST00000332220 MT1FP04733 61 aa10□□□□□ -0.81
YBX1-202ENST00000332220 S4R3F8 94 aa9.97□□□□□ -0.81
YBX1-202ENST00000332220 H3BPC8 53 aa9.96□□□□□ -0.82
YBX1-202ENST00000332220 KRTAP10-10P60014 251 aa9.93□□□□□ -0.82
YBX1-202ENST00000332220 LCA10Q71F78 164 aa9.93□□□□□ -0.82
YBX1-202ENST00000332220 TRAV7A0A075B6U4 112 aa9.92□□□□□ -0.82
YBX1-202ENST00000332220 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
YBX1-202ENST00000332220 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
YBX1-202ENST00000332220 KRTAP9-3Q9BYQ3 159 aa9.84□□□□□ -0.83
YBX1-202ENST00000332220 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
YBX1-202ENST00000332220 A8MUN3 132 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms