RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
NPHP1-201ENST00000316534 IGLV9-49A0A0B4J1Y8 123 aa4.15□□□□□ -1.75
NPHP1-201ENST00000316534 CYP4F30PQ9H0H9 118 aa4.14□□□□□ -1.75
NPHP1-201ENST00000316534 ANAPC11Q9NYG5 84 aa4.14□□□□□ -1.75
NPHP1-201ENST00000316534 C5orf47Q569G3 176 aa4.14□□□□□ -1.75
NPHP1-201ENST00000316534 CDK2AP2O75956 126 aa4.13□□□□□ -1.75
NPHP1-201ENST00000316534 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
NPHP1-201ENST00000316534 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
NPHP1-201ENST00000316534 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
NPHP1-201ENST00000316534 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
NPHP1-201ENST00000316534 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
NPHP1-201ENST00000316534 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
NPHP1-201ENST00000316534 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
NPHP1-201ENST00000316534 H3BPC8 53 aa4.1□□□□□ -1.75
NPHP1-201ENST00000316534 C1orf195Q5TG92 126 aa4.09□□□□□ -1.75
NPHP1-201ENST00000316534 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
NPHP1-201ENST00000316534 SPINK1P00995 79 aa4.09□□□□□ -1.75
NPHP1-201ENST00000316534 hDV103S1A0JD37 113 aa4.09□□□□□ -1.76
NPHP1-201ENST00000316534 Q1T7F1 81 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 KRTAP17-1Q9BYP8 105 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 FAM229AH3BQW9 127 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 SPAG11AQ6PDA7 123 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
NPHP1-201ENST00000316534 Q8N9P0 234 aaPredicted RBP4.07□□□□□ -1.76
NPHP1-201ENST00000316534 LIMD2Q9BT23 127 aa4.07□□□□□ -1.76
NPHP1-201ENST00000316534 TP53AIP1Q9HCN2 124 aa4.07□□□□□ -1.76
NPHP1-201ENST00000316534 C20orf197Q8N268 126 aa4.06□□□□□ -1.76
NPHP1-201ENST00000316534 NDUFB1O75438 58 aa4.06□□□□□ -1.76
NPHP1-201ENST00000316534 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
NPHP1-201ENST00000316534 PLA2G1BP04054 148 aaKnown RBP4.06□□□□□ -1.76
NPHP1-201ENST00000316534 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
NPHP1-201ENST00000316534 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
NPHP1-201ENST00000316534 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
NPHP1-201ENST00000316534 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
NPHP1-201ENST00000316534 MRPL34Q9BQ48 92 aaKnown RBP4.05□□□□□ -1.76
NPHP1-201ENST00000316534 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
NPHP1-201ENST00000316534 TYMSOSQ8TAI1 123 aa4.04□□□□□ -1.76
NPHP1-201ENST00000316534 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
NPHP1-201ENST00000316534 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
NPHP1-201ENST00000316534 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
NPHP1-201ENST00000316534 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
NPHP1-201ENST00000316534 SNURFQ9Y675 71 aa4□□□□□ -1.77
NPHP1-201ENST00000316534 SMR3BP02814 79 aaPredicted RBP4□□□□□ -1.77
NPHP1-201ENST00000316534 PRO0628Q9UI54 55 aa4□□□□□ -1.77
NPHP1-201ENST00000316534 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
NPHP1-201ENST00000316534 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
NPHP1-201ENST00000316534 H0Y9P7 68 aa3.98□□□□□ -1.77
NPHP1-201ENST00000316534 LINC00313P59037 77 aa3.98□□□□□ -1.77
NPHP1-201ENST00000316534 Q5VSD8 79 aa3.98□□□□□ -1.77
NPHP1-201ENST00000316534 Q8N1X5 172 aa3.98□□□□□ -1.77
NPHP1-201ENST00000316534 LCE2BO14633 110 aa3.97□□□□□ -1.77
NPHP1-201ENST00000316534 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
NPHP1-201ENST00000316534 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
NPHP1-201ENST00000316534 Q5W150 140 aa3.97□□□□□ -1.77
NPHP1-201ENST00000316534 A8MUU9 505 aa3.96□□□□□ -1.78
NPHP1-201ENST00000316534 MP68P56378 58 aa3.96□□□□□ -1.78
NPHP1-201ENST00000316534 C1orf64Q8NEQ6 169 aa3.96□□□□□ -1.78
NPHP1-201ENST00000316534 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
NPHP1-201ENST00000316534 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
NPHP1-201ENST00000316534 KIAA1109Q2LD37 5005 aa3.95□□□□□ -1.78
NPHP1-201ENST00000316534 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
NPHP1-201ENST00000316534 HERC2O95714 4834 aa3.94□□□□□ -1.78
NPHP1-201ENST00000316534 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
NPHP1-201ENST00000316534 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
NPHP1-201ENST00000316534 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
NPHP1-201ENST00000316534 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
NPHP1-201ENST00000316534 Q5VV11 94 aa3.91□□□□□ -1.78
NPHP1-201ENST00000316534 Q75L30 129 aa3.9□□□□□ -1.79
NPHP1-201ENST00000316534 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.79
NPHP1-201ENST00000316534 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
NPHP1-201ENST00000316534 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
NPHP1-201ENST00000316534 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
NPHP1-201ENST00000316534 NDUFS5O43920 106 aa3.84□□□□□ -1.79
NPHP1-201ENST00000316534 XP32Q5T750 250 aa3.83□□□□□ -1.8
NPHP1-201ENST00000316534 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
NPHP1-201ENST00000316534 HRES1P13985 223 aa3.82□□□□□ -1.8
NPHP1-201ENST00000316534 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
NPHP1-201ENST00000316534 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
NPHP1-201ENST00000316534 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
NPHP1-201ENST00000316534 V9GYY9 64 aa3.81□□□□□ -1.8
NPHP1-201ENST00000316534 A6NN06 94 aa3.8□□□□□ -1.8
NPHP1-201ENST00000316534 C7orf65Q6ZTY9 151 aa3.8□□□□□ -1.8
NPHP1-201ENST00000316534 LCA10Q71F78 164 aa3.79□□□□□ -1.8
NPHP1-201ENST00000316534 A8MUN3 132 aa3.79□□□□□ -1.8
NPHP1-201ENST00000316534 COA5Q86WW8 74 aa3.79□□□□□ -1.8
NPHP1-201ENST00000316534 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
NPHP1-201ENST00000316534 RETNLBQ9BQ08 111 aa3.78□□□□□ -1.8
NPHP1-201ENST00000316534 A8MU10 97 aa3.77□□□□□ -1.81
NPHP1-201ENST00000316534 KRTAP3-1Q9BYR8 98 aa3.77□□□□□ -1.81
NPHP1-201ENST00000316534 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
NPHP1-201ENST00000316534 MPLKIPQ8TAP9 179 aa3.76□□□□□ -1.81
NPHP1-201ENST00000316534 ACYP2P14621 99 aa3.76□□□□□ -1.81
NPHP1-201ENST00000316534 LCE2CQ5TA81 110 aa3.74□□□□□ -1.81
NPHP1-201ENST00000316534 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
NPHP1-201ENST00000316534 LPAP08519 4548 aa3.73□□□□□ -1.81
NPHP1-201ENST00000316534 PRR4Q16378 134 aa3.73□□□□□ -1.81
NPHP1-201ENST00000316534 SPINK7P58062 85 aa3.72□□□□□ -1.81
NPHP1-201ENST00000316534 ATP11AUNQ6ZP68 121 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms