RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 WFDC2Q14508 124 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 FAM27BQ5VT28 67 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 Q8IZM0 81 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 ACACBO00763 2458 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 ITPR1Q14643 2758 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 IGIPA6NJ69 53 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 GNG5P63218 68 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 REG3GQ6UW15 175 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 CLPSL2Q6UWE3 100 aa0.54□□□□□ -2.32
CEP290-201ENST00000309041 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 C4orf26Q17RF5 130 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 NOTCH1P46531 2555 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 TNP1P09430 55 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 KAAG1Q9UBP8 84 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
CEP290-201ENST00000309041 CRYBG3Q68DQ2 2970 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 C5orf56Q8N8D9 126 aa0.53□□□□□ -2.32
CEP290-201ENST00000309041 NIPBLQ6KC79 2804 aaeCLIP0.53□□□□□ -2.323e-6■■■■■ 30.3
CEP290-201ENST00000309041 C1orf134Q5TEV5 83 aa0.53□□□□□ -2.33
CEP290-201ENST00000309041 COX14Q96I36 57 aa0.53□□□□□ -2.33
CEP290-201ENST00000309041 NDUFA12Q9UI09 145 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 CFAP46Q8IYW2 2715 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 A0A087WTM6 91 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 SMIM27A0A1W2PRY6 76 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 KRTAP10-10P60014 251 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 KRTAP8-1Q8IUC2 63 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 F8WEM9 126 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 HINT1P49773 126 aaPredicted RBP0.52□□□□□ -2.33
CEP290-201ENST00000309041 KRTAP10-7P60409 375 aaPredicted RBP0.52□□□□□ -2.33
CEP290-201ENST00000309041 CDC26Q8NHZ8 85 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 GCN1Q92616 2671 aaKnown RBP0.52□□□□□ -2.33
CEP290-201ENST00000309041 ZANQ9Y493 2812 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 K7EIM0 57 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 IGLC6P0CF74 106 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 COX6A2Q02221 97 aa0.52□□□□□ -2.33
CEP290-201ENST00000309041 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 SNHG12Q9BXW3 62 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 KALRNO60229 2985 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 NDUFA4O00483 81 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 FAM223AQ8IWN6 122 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 SPTY2D1-AS1A0A0U1RR47 76 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 I3L3M4 83 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 CYSRT1A8MQ03 144 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 CELSR2Q9HCU4 2923 aa0.51□□□□□ -2.33
CEP290-201ENST00000309041 C7orf77A4D0Y5 90 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 C10orf128Q5T292 105 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 R4GN34 69 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 DEFB103AP81534 67 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 MMP24-AS1A0A0U1RRL7 71 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 KRTAP10-4P60372 401 aaPredicted RBP0.5□□□□□ -2.33
CEP290-201ENST00000309041 DEFB134Q4QY38 66 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 MINOS1Q5TGZ0 78 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 MINOS1-NBL1R4GNA1 71 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 PRB3Q04118 309 aaPredicted RBP0.5□□□□□ -2.33
CEP290-201ENST00000309041 PIEZO2Q9H5I5 2752 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 A0A1B0GV90 55 aa0.5□□□□□ -2.33
CEP290-201ENST00000309041 I3L2K1 104 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 MT1AP04731 61 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 SNRPD3P62318 126 aaKnown RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 C5orf67F2Z3F1 127 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 SPINK7P58062 85 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 KRTAP10-3P60369 221 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 DSPP15924 2871 aaKnown RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 PRB4P10163 310 aaPredicted RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 POLR2KP53803 58 aaKnown RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 SYNE2Q8WXH0 6885 aaKnown RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 IGKV4-1P06312 121 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 Q8TAT8 98 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 RBM3P98179 157 aaKnown RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 TTTY12Q9BZ98 90 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 PRRC2CQ9Y520 2896 aaKnown RBP0.49□□□□□ -2.33
CEP290-201ENST00000309041 SPAG11BQ08648 103 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 RHPN1-AS1Q9BWJ2 59 aa0.49□□□□□ -2.33
CEP290-201ENST00000309041 MUSTN1Q8IVN3 82 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 CEP295Q9C0D2 2601 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 MGST3O14880 152 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 D6R8Y8 96 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 GNG10P50151 68 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 DEFB136Q30KP8 78 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 KRTAP13-4Q3LI77 160 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 M0QY20 66 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 UBE2DNLQ8IWF7 75 aa0.48□□□□□ -2.33
CEP290-201ENST00000309041 NBDYA0A0U1RRE5 68 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 GIG44P09565 113 aaPredicted RBP0.47□□□□□ -2.33
CEP290-201ENST00000309041 LINC00694P0DN24 101 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 NREPQ16612 68 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 DCHS2Q6V1P9 2916 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 HELZ2Q9BYK8 2649 aaKnown RBP0.47□□□□□ -2.33
CEP290-201ENST00000309041 FAM223BA6NKX1 122 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 FXYD3Q14802 87 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 TMEM167AQ8TBQ9 72 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 HECTD1Q9ULT8 2610 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 MUC19Q7Z5P9 8384 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 FLNAP21333 2647 aaKnown RBP0.47□□□□□ -2.33
CEP290-201ENST00000309041 WFDC10AQ9H1F0 79 aa0.47□□□□□ -2.33
CEP290-201ENST00000309041 ATRQ13535 2644 aa0.46□□□□□ -2.34
CEP290-201ENST00000309041 MXRA5Q9NR99 2828 aa0.46□□□□□ -2.34
CEP290-201ENST00000309041 Q96NJ1 140 aa0.46□□□□□ -2.34
CEP290-201ENST00000309041 SETXQ7Z333 2677 aaKnown RBP0.46□□□□□ -2.34
CEP290-201ENST00000309041 GNG11P61952 73 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms