RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
TM4SF1-201ENST00000305366 PHF5AQ7RTV0 110 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-201ENST00000305366 C20orf197Q8N268 126 aa4.89□□□□□ -1.63
TM4SF1-201ENST00000305366 DEFB105AQ8NG35 78 aa4.89□□□□□ -1.63
TM4SF1-201ENST00000305366 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 CNBPP62633 177 aaKnown RBP4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 DNAH8Q96JB1 4490 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 BPY2O14599 106 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 ERC2-IT1O76042 136 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 LINC00313P59037 77 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 SPRR4Q96PI1 79 aa4.88□□□□□ -1.63
TM4SF1-201ENST00000305366 A0A1W2PNM2 257 aa4.87□□□□□ -1.63
TM4SF1-201ENST00000305366 H7BZZ5 65 aa4.87□□□□□ -1.63
TM4SF1-201ENST00000305366 RPL37AP61513 92 aaKnown RBP4.87□□□□□ -1.63
TM4SF1-201ENST00000305366 C1orf137Q5JT78 98 aa4.87□□□□□ -1.63
TM4SF1-201ENST00000305366 Q8NBF4 154 aa4.87□□□□□ -1.63
TM4SF1-201ENST00000305366 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
TM4SF1-201ENST00000305366 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
TM4SF1-201ENST00000305366 ST20-AS1Q8NBB2 130 aa4.86□□□□□ -1.63
TM4SF1-201ENST00000305366 NDUFC1O43677 76 aa4.86□□□□□ -1.63
TM4SF1-201ENST00000305366 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
TM4SF1-201ENST00000305366 UBE2BP63146 152 aa4.85□□□□□ -1.63
TM4SF1-201ENST00000305366 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
TM4SF1-201ENST00000305366 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
TM4SF1-201ENST00000305366 A0A096LNI7 61 aa4.84□□□□□ -1.63
TM4SF1-201ENST00000305366 PANO1I0J062 215 aa4.84□□□□□ -1.63
TM4SF1-201ENST00000305366 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
TM4SF1-201ENST00000305366 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.84□□□□□ -1.63
TM4SF1-201ENST00000305366 IGLV8-61A0A075B6I0 122 aa4.83□□□□□ -1.64
TM4SF1-201ENST00000305366 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
TM4SF1-201ENST00000305366 Q8N9L7 120 aa4.83□□□□□ -1.64
TM4SF1-201ENST00000305366 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
TM4SF1-201ENST00000305366 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
TM4SF1-201ENST00000305366 C9orf163Q8N9P6 203 aa4.82□□□□□ -1.64
TM4SF1-201ENST00000305366 F8WEM9 126 aa4.81□□□□□ -1.64
TM4SF1-201ENST00000305366 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
TM4SF1-201ENST00000305366 FP248Q71RG6 208 aaPredicted RBP4.81□□□□□ -1.64
TM4SF1-201ENST00000305366 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
TM4SF1-201ENST00000305366 SNURFQ9Y675 71 aa4.81□□□□□ -1.64
TM4SF1-201ENST00000305366 IGKV2-24A0A0C4DH68 120 aa4.8□□□□□ -1.64
TM4SF1-201ENST00000305366 SPRR1BP22528 89 aa4.8□□□□□ -1.64
TM4SF1-201ENST00000305366 DSCR10P59022 87 aa4.8□□□□□ -1.64
TM4SF1-201ENST00000305366 IGFL1Q6UW32 110 aa4.8□□□□□ -1.64
TM4SF1-201ENST00000305366 ZNF706Q9Y5V0 76 aaPredicted RBP4.8□□□□□ -1.64
TM4SF1-201ENST00000305366 FAT3Q8TDW7 4589 aa4.78□□□□□ -1.64
TM4SF1-201ENST00000305366 PRLHP81277 87 aa4.78□□□□□ -1.64
TM4SF1-201ENST00000305366 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
TM4SF1-201ENST00000305366 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
TM4SF1-201ENST00000305366 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
TM4SF1-201ENST00000305366 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
TM4SF1-201ENST00000305366 K7EQZ3 153 aa4.76□□□□□ -1.65
TM4SF1-201ENST00000305366 HIGD2AQ9BW72 106 aa4.76□□□□□ -1.65
TM4SF1-201ENST00000305366 UBE2AP49459 152 aa4.76□□□□□ -1.65
TM4SF1-201ENST00000305366 HCG22E2RYF7 251 aa4.75□□□□□ -1.65
TM4SF1-201ENST00000305366 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
TM4SF1-201ENST00000305366 SPACA4Q8TDM5 124 aa4.75□□□□□ -1.65
TM4SF1-201ENST00000305366 A0A087WSZ3 146 aa4.73□□□□□ -1.65
TM4SF1-201ENST00000305366 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
TM4SF1-201ENST00000305366 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
TM4SF1-201ENST00000305366 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
TM4SF1-201ENST00000305366 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
TM4SF1-201ENST00000305366 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
TM4SF1-201ENST00000305366 RNF213Q63HN8 5207 aa4.7□□□□□ -1.66
TM4SF1-201ENST00000305366 LINC00472Q9H8W2 130 aa4.7□□□□□ -1.66
TM4SF1-201ENST00000305366 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
TM4SF1-201ENST00000305366 ATP11AUNQ6ZP68 121 aa4.69□□□□□ -1.66
TM4SF1-201ENST00000305366 A8MWP4 228 aa4.68□□□□□ -1.66
TM4SF1-201ENST00000305366 DEFB116Q30KQ4 102 aa4.68□□□□□ -1.66
TM4SF1-201ENST00000305366 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
TM4SF1-201ENST00000305366 LRP2P98164 4655 aa4.67□□□□□ -1.66
TM4SF1-201ENST00000305366 H3BPC8 53 aa4.66□□□□□ -1.66
TM4SF1-201ENST00000305366 NDUFB1O75438 58 aa4.66□□□□□ -1.66
TM4SF1-201ENST00000305366 SPINK6Q6UWN8 80 aa4.66□□□□□ -1.66
TM4SF1-201ENST00000305366 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
TM4SF1-201ENST00000305366 CASC2Q6XLA1 102 aa4.65□□□□□ -1.66
TM4SF1-201ENST00000305366 CYP4F30PQ9H0H9 118 aa4.65□□□□□ -1.66
TM4SF1-201ENST00000305366 A0A087X002 238 aa4.65□□□□□ -1.67
TM4SF1-201ENST00000305366 A6NN06 94 aa4.65□□□□□ -1.67
TM4SF1-201ENST00000305366 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
TM4SF1-201ENST00000305366 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
TM4SF1-201ENST00000305366 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
TM4SF1-201ENST00000305366 TRAV22A0A0B4J277 110 aa4.63□□□□□ -1.67
TM4SF1-201ENST00000305366 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
TM4SF1-201ENST00000305366 Q1T7F1 81 aa4.63□□□□□ -1.67
TM4SF1-201ENST00000305366 FAM229BQ4G0N7 80 aa4.63□□□□□ -1.67
TM4SF1-201ENST00000305366 Q96NJ1 140 aa4.63□□□□□ -1.67
TM4SF1-201ENST00000305366 TNXBP22105 4242 aa4.62□□□□□ -1.67
TM4SF1-201ENST00000305366 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
TM4SF1-201ENST00000305366 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
TM4SF1-201ENST00000305366 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
TM4SF1-201ENST00000305366 H0Y9P7 68 aa4.61□□□□□ -1.67
TM4SF1-201ENST00000305366 C1orf64Q8NEQ6 169 aa4.61□□□□□ -1.67
TM4SF1-201ENST00000305366 ZNF861PO60384 105 aa4.6□□□□□ -1.67
TM4SF1-201ENST00000305366 MOBPQ13875 183 aa4.6□□□□□ -1.67
TM4SF1-201ENST00000305366 SPANXA2-OT1Q8N9U9 137 aa4.6□□□□□ -1.67
TM4SF1-201ENST00000305366 LINC00208Q96KT6 92 aa4.6□□□□□ -1.67
TM4SF1-201ENST00000305366 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
TM4SF1-201ENST00000305366 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
TM4SF1-201ENST00000305366 PRR4Q16378 134 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms