RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 A8MWP4 228 aa12.24□□□□□ -0.45
LINC01116-201ENST00000295549 LINC00313P59037 77 aa12.24□□□□□ -0.45
LINC01116-201ENST00000295549 UBL5Q9BZL1 73 aa12.24□□□□□ -0.45
LINC01116-201ENST00000295549 DSCR10P59022 87 aa12.22□□□□□ -0.45
LINC01116-201ENST00000295549 BPY2O14599 106 aa12.2□□□□□ -0.46
LINC01116-201ENST00000295549 C8orf87E5RJ46 101 aa12.2□□□□□ -0.46
LINC01116-201ENST00000295549 ACYP1P07311 99 aa12.2□□□□□ -0.46
LINC01116-201ENST00000295549 SEC61BP60468 96 aaKnown RBP12.2□□□□□ -0.46
LINC01116-201ENST00000295549 NOTCH2NLQ7Z3S9 236 aa12.2□□□□□ -0.46
LINC01116-201ENST00000295549 IGKV3D-7A0A0C4DH55 119 aa12.19□□□□□ -0.46
LINC01116-201ENST00000295549 FAM240AA0A1B0GVK7 77 aa12.18□□□□□ -0.46
LINC01116-201ENST00000295549 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
LINC01116-201ENST00000295549 PRR15Q8IV56 129 aa12.18□□□□□ -0.46
LINC01116-201ENST00000295549 RNF213Q63HN8 5207 aa12.16□□□□□ -0.46
LINC01116-201ENST00000295549 Q75L30 129 aa12.16□□□□□ -0.46
LINC01116-201ENST00000295549 KRTAP16-1A8MUX0 517 aa12.14□□□□□ -0.47
LINC01116-201ENST00000295549 C20orf166-AS1Q96NR2 134 aa12.14□□□□□ -0.47
LINC01116-201ENST00000295549 A8MUU9 505 aa12.11□□□□□ -0.47
LINC01116-201ENST00000295549 K7EQZ3 153 aa12.11□□□□□ -0.47
LINC01116-201ENST00000295549 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
LINC01116-201ENST00000295549 MUC2Q02817 5179 aa12.1□□□□□ -0.47
LINC01116-201ENST00000295549 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
LINC01116-201ENST00000295549 CXCL6P80162 114 aa12.04□□□□□ -0.48
LINC01116-201ENST00000295549 J3QR89 54 aa12.03□□□□□ -0.48
LINC01116-201ENST00000295549 Q8N9L7 120 aa12.03□□□□□ -0.48
LINC01116-201ENST00000295549 MMP24-AS1A0A0U1RRL7 71 aa12.03□□□□□ -0.48
LINC01116-201ENST00000295549 ATP11AUNQ6ZP68 121 aa12.03□□□□□ -0.48
LINC01116-201ENST00000295549 Q8N9P0 234 aaPredicted RBP11.98□□□□□ -0.49
LINC01116-201ENST00000295549 hDV103S1A0JD37 113 aa11.96□□□□□ -0.49
LINC01116-201ENST00000295549 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.49
LINC01116-201ENST00000295549 KRTAP4-1Q9BYQ7 146 aa11.95□□□□□ -0.5
LINC01116-201ENST00000295549 ATP5EP2Q5VTU8 51 aa11.94□□□□□ -0.5
LINC01116-201ENST00000295549 MRPL34Q9BQ48 92 aaKnown RBP11.94□□□□□ -0.5
LINC01116-201ENST00000295549 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
LINC01116-201ENST00000295549 CASC2Q6XLA1 102 aa11.89□□□□□ -0.51
LINC01116-201ENST00000295549 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
LINC01116-201ENST00000295549 WFDC13Q8IUB5 93 aa11.87□□□□□ -0.51
LINC01116-201ENST00000295549 K7ERU9 68 aa11.85□□□□□ -0.51
LINC01116-201ENST00000295549 ZCCHC13Q8WW36 166 aaKnown RBP11.83□□□□□ -0.52
LINC01116-201ENST00000295549 NDUFS5O43920 106 aa11.79□□□□□ -0.52
LINC01116-201ENST00000295549 A0A0U1RQV1 116 aa11.76□□□□□ -0.53
LINC01116-201ENST00000295549 HIST1H4AP62805 103 aaKnown RBP11.76□□□□□ -0.53
LINC01116-201ENST00000295549 FAT4Q6V0I7 4981 aa11.68□□□□□ -0.54
LINC01116-201ENST00000295549 A0A087WVE0 104 aa11.66□□□□□ -0.54
LINC01116-201ENST00000295549 Q5W150 140 aa11.65□□□□□ -0.54
LINC01116-201ENST00000295549 TP53AIP1Q9HCN2 124 aa11.65□□□□□ -0.54
LINC01116-201ENST00000295549 SPINK7P58062 85 aa11.62□□□□□ -0.55
LINC01116-201ENST00000295549 KRTAP19-2Q3LHN2 52 aa11.62□□□□□ -0.55
LINC01116-201ENST00000295549 IMUPQ9GZP8 106 aa11.57□□□□□ -0.56
LINC01116-201ENST00000295549 MT-ATP8P03928 68 aa11.55□□□□□ -0.56
LINC01116-201ENST00000295549 HRES1P13985 223 aa11.55□□□□□ -0.56
LINC01116-201ENST00000295549 LCE2CQ5TA81 110 aa11.55□□□□□ -0.56
LINC01116-201ENST00000295549 MPLKIPQ8TAP9 179 aa11.52□□□□□ -0.56
LINC01116-201ENST00000295549 COX6B2Q6YFQ2 88 aa11.49□□□□□ -0.57
LINC01116-201ENST00000295549 C7orf65Q6ZTY9 151 aa11.48□□□□□ -0.57
LINC01116-201ENST00000295549 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
LINC01116-201ENST00000295549 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
LINC01116-201ENST00000295549 UQCRQO14949 82 aa11.46□□□□□ -0.57
LINC01116-201ENST00000295549 RBM12B-AS1Q9P1G2 102 aa11.45□□□□□ -0.58
LINC01116-201ENST00000295549 TRAV22A0A0B4J277 110 aa11.43□□□□□ -0.58
LINC01116-201ENST00000295549 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
LINC01116-201ENST00000295549 OCR1Q9BZK8 76 aa11.42□□□□□ -0.58
LINC01116-201ENST00000295549 FLGP20930 4061 aaPredicted RBP11.41□□□□□ -0.58
LINC01116-201ENST00000295549 SCGB1A1P11684 91 aa11.38□□□□□ -0.59
LINC01116-201ENST00000295549 FAM236DA0A1B0GTK5 79 aa11.36□□□□□ -0.59
LINC01116-201ENST00000295549 FAM236CP0DP71 79 aa11.36□□□□□ -0.59
LINC01116-201ENST00000295549 MT1HP80294 61 aa11.36□□□□□ -0.59
LINC01116-201ENST00000295549 ATOX1O00244 68 aa11.35□□□□□ -0.59
LINC01116-201ENST00000295549 H0Y9P7 68 aa11.33□□□□□ -0.6
LINC01116-201ENST00000295549 LOC101927531A0A1B0GV80 90 aa11.32□□□□□ -0.6
LINC01116-201ENST00000295549 FAM236AA0A1B0GUQ0 79 aa11.3□□□□□ -0.6
LINC01116-201ENST00000295549 FAM236BA0A1B0GV22 79 aa11.3□□□□□ -0.6
LINC01116-201ENST00000295549 CYP4F30PQ9H0H9 118 aa11.3□□□□□ -0.6
LINC01116-201ENST00000295549 C5orf47Q569G3 176 aa11.27□□□□□ -0.6
LINC01116-201ENST00000295549 MP68P56378 58 aa11.25□□□□□ -0.61
LINC01116-201ENST00000295549 SMIM20Q8N5G0 67 aa11.24□□□□□ -0.61
LINC01116-201ENST00000295549 C4orf26Q17RF5 130 aa11.23□□□□□ -0.61
LINC01116-201ENST00000295549 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
LINC01116-201ENST00000295549 LINC00208Q96KT6 92 aa11.21□□□□□ -0.61
LINC01116-201ENST00000295549 H3BPC8 53 aa11.18□□□□□ -0.62
LINC01116-201ENST00000295549 M0R2T5 61 aa11.18□□□□□ -0.62
LINC01116-201ENST00000295549 TRAV7A0A075B6U4 112 aa11.17□□□□□ -0.62
LINC01116-201ENST00000295549 H1FX-AS1Q4G0G2 97 aa11.15□□□□□ -0.62
LINC01116-201ENST00000295549 KRTAP3-1Q9BYR8 98 aa11.09□□□□□ -0.63
LINC01116-201ENST00000295549 KRTAP10-6P60371 365 aaPredicted RBP11.06□□□□□ -0.64
LINC01116-201ENST00000295549 KLKP1Q107X0 134 aa11.06□□□□□ -0.64
LINC01116-201ENST00000295549 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
LINC01116-201ENST00000295549 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
LINC01116-201ENST00000295549 A8MUN3 132 aa10.91□□□□□ -0.66
LINC01116-201ENST00000295549 KRTAP9-2Q9BYQ4 174 aa10.91□□□□□ -0.66
LINC01116-201ENST00000295549 S4R3F8 94 aa10.89□□□□□ -0.67
LINC01116-201ENST00000295549 SNURFQ9Y675 71 aa10.87□□□□□ -0.67
LINC01116-201ENST00000295549 C20orf197Q8N268 126 aa10.86□□□□□ -0.67
LINC01116-201ENST00000295549 KRTAP9-8Q9BYQ0 159 aa10.85□□□□□ -0.67
LINC01116-201ENST00000295549 COX7CP15954 63 aa10.83□□□□□ -0.68
LINC01116-201ENST00000295549 LCA10Q71F78 164 aa10.83□□□□□ -0.68
LINC01116-201ENST00000295549 DMAC1Q96GE9 116 aa10.79□□□□□ -0.68
LINC01116-201ENST00000295549 CSAG1Q6PB30 78 aa10.75□□□□□ -0.69
LINC01116-201ENST00000295549 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
LINC01116-201ENST00000295549 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms