RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 A0A0U1RQV1 116 aa14.35□□□□□ -0.11
SSU72-201ENST00000291386 C20orf166-AS1Q96NR2 134 aa14.35□□□□□ -0.11
SSU72-201ENST00000291386 F8W1H4 67 aa14.34□□□□□ -0.11
SSU72-201ENST00000291386 A0A1B0GVX0 72 aa14.33□□□□□ -0.12
SSU72-201ENST00000291386 NREPQ16612 68 aa14.33□□□□□ -0.12
SSU72-201ENST00000291386 A8MUU9 505 aa14.32□□□□□ -0.12
SSU72-201ENST00000291386 IGHV6-1A0A0B4J1U7 121 aa14.31□□□□□ -0.12
SSU72-201ENST00000291386 KRTAP16-1A8MUX0 517 aa14.3□□□□□ -0.12
SSU72-201ENST00000291386 C8orf87E5RJ46 101 aa14.3□□□□□ -0.12
SSU72-201ENST00000291386 NOTCH2NLQ7Z3S9 236 aa14.3□□□□□ -0.12
SSU72-201ENST00000291386 NDUFB1O75438 58 aa14.26□□□□□ -0.13
SSU72-201ENST00000291386 ATP11AUNQ6ZP68 121 aa14.26□□□□□ -0.13
SSU72-201ENST00000291386 A8MWP4 228 aa14.25□□□□□ -0.13
SSU72-201ENST00000291386 FAT4Q6V0I7 4981 aa14.2□□□□□ -0.14
SSU72-201ENST00000291386 IGKV3D-7A0A0C4DH55 119 aa14.19□□□□□ -0.14
SSU72-201ENST00000291386 ETDBQ3ZM63 59 aa14.17□□□□□ -0.14
SSU72-201ENST00000291386 Q6ZVQ6 151 aa14.15□□□□□ -0.14
SSU72-201ENST00000291386 PRR15Q8IV56 129 aa14.14□□□□□ -0.15
SSU72-201ENST00000291386 C8orf17Q9NRJ1 99 aa14.13□□□□□ -0.15
SSU72-201ENST00000291386 BPY2O14599 106 aa14.1□□□□□ -0.15
SSU72-201ENST00000291386 LINC00846Q9NV44 126 aa14.1□□□□□ -0.15
SSU72-201ENST00000291386 UBL5Q9BZL1 73 aa14.06□□□□□ -0.16
SSU72-201ENST00000291386 Q8N9P0 234 aaPredicted RBP14.05□□□□□ -0.16
SSU72-201ENST00000291386 K7EQZ3 153 aa14.04□□□□□ -0.16
SSU72-201ENST00000291386 KRTAP19-2Q3LHN2 52 aa14.03□□□□□ -0.16
SSU72-201ENST00000291386 LCE2AQ5TA79 106 aaPredicted RBP14.03□□□□□ -0.16
SSU72-201ENST00000291386 MMP24-AS1A0A0U1RRL7 71 aa14.01□□□□□ -0.17
SSU72-201ENST00000291386 A0A1B0GV90 55 aa14.01□□□□□ -0.17
SSU72-201ENST00000291386 LCE2CQ5TA81 110 aa13.97□□□□□ -0.17
SSU72-201ENST00000291386 TMEM254Q8TBM7 123 aa13.96□□□□□ -0.17
SSU72-201ENST00000291386 ZCCHC13Q8WW36 166 aaKnown RBP13.92□□□□□ -0.18
SSU72-201ENST00000291386 MRPL34Q9BQ48 92 aaKnown RBP13.92□□□□□ -0.18
SSU72-201ENST00000291386 hDV103S1A0JD37 113 aa13.91□□□□□ -0.18
SSU72-201ENST00000291386 Q8N9L7 120 aa13.9□□□□□ -0.18
SSU72-201ENST00000291386 ACYP1P07311 99 aa13.88□□□□□ -0.19
SSU72-201ENST00000291386 FAM240AA0A1B0GVK7 77 aa13.85□□□□□ -0.19
SSU72-201ENST00000291386 CXCL6P80162 114 aa13.83□□□□□ -0.2
SSU72-201ENST00000291386 CASC2Q6XLA1 102 aa13.79□□□□□ -0.2
SSU72-201ENST00000291386 WFDC13Q8IUB5 93 aa13.78□□□□□ -0.2
SSU72-201ENST00000291386 COX6B2Q6YFQ2 88 aa13.77□□□□□ -0.21
SSU72-201ENST00000291386 MT1HP80294 61 aa13.74□□□□□ -0.21
SSU72-201ENST00000291386 HCG22E2RYF7 251 aa13.73□□□□□ -0.21
SSU72-201ENST00000291386 NDUFS5O43920 106 aa13.73□□□□□ -0.21
SSU72-201ENST00000291386 HRES1P13985 223 aa13.71□□□□□ -0.21
SSU72-201ENST00000291386 SPINK7P58062 85 aa13.69□□□□□ -0.22
SSU72-201ENST00000291386 MPLKIPQ8TAP9 179 aa13.69□□□□□ -0.22
SSU72-201ENST00000291386 ATP5EP2Q5VTU8 51 aa13.65□□□□□ -0.22
SSU72-201ENST00000291386 FLGP20930 4061 aaPredicted RBP13.64□□□□□ -0.23
SSU72-201ENST00000291386 RBM12B-AS1Q9P1G2 102 aa13.61□□□□□ -0.23
SSU72-201ENST00000291386 Q5W150 140 aa13.59□□□□□ -0.23
SSU72-201ENST00000291386 LINC00643Q86TS7 51 aa13.55□□□□□ -0.24
SSU72-201ENST00000291386 J3QR89 54 aa13.53□□□□□ -0.24
SSU72-201ENST00000291386 FAM236DA0A1B0GTK5 79 aa13.51□□□□□ -0.25
SSU72-201ENST00000291386 FAM236CP0DP71 79 aa13.51□□□□□ -0.25
SSU72-201ENST00000291386 TP53AIP1Q9HCN2 124 aa13.49□□□□□ -0.25
SSU72-201ENST00000291386 M0R2T5 61 aa13.47□□□□□ -0.25
SSU72-201ENST00000291386 HIST1H4AP62805 103 aaKnown RBP13.44□□□□□ -0.26
SSU72-201ENST00000291386 C7orf65Q6ZTY9 151 aa13.44□□□□□ -0.26
SSU72-201ENST00000291386 IGKV2D-30A0A075B6S6 120 aa13.41□□□□□ -0.26
SSU72-201ENST00000291386 IGKV2-30P06310 120 aa13.41□□□□□ -0.26
SSU72-201ENST00000291386 KRTAP10-6P60371 365 aaPredicted RBP13.41□□□□□ -0.26
SSU72-201ENST00000291386 LORP23490 312 aaPredicted RBP13.4□□□□□ -0.26
SSU72-201ENST00000291386 A0A087WVE0 104 aa13.31□□□□□ -0.28
SSU72-201ENST00000291386 K7ERU9 68 aa13.23□□□□□ -0.29
SSU72-201ENST00000291386 TRAV22A0A0B4J277 110 aa13.21□□□□□ -0.29
SSU72-201ENST00000291386 UQCRQO14949 82 aa13.2□□□□□ -0.3
SSU72-201ENST00000291386 KRTAP9-2Q9BYQ4 174 aa13.19□□□□□ -0.3
SSU72-201ENST00000291386 H1FX-AS1Q4G0G2 97 aa13.17□□□□□ -0.3
SSU72-201ENST00000291386 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
SSU72-201ENST00000291386 C4orf26Q17RF5 130 aa13.14□□□□□ -0.31
SSU72-201ENST00000291386 LOC101927531A0A1B0GV80 90 aa13.11□□□□□ -0.31
SSU72-201ENST00000291386 CYP4F30PQ9H0H9 118 aa13.11□□□□□ -0.31
SSU72-201ENST00000291386 KRTAP9-8Q9BYQ0 159 aa13.1□□□□□ -0.31
SSU72-201ENST00000291386 ATOX1O00244 68 aa13.08□□□□□ -0.32
SSU72-201ENST00000291386 OCR1Q9BZK8 76 aa13.07□□□□□ -0.32
SSU72-201ENST00000291386 IMUPQ9GZP8 106 aa13.07□□□□□ -0.32
SSU72-201ENST00000291386 H0Y9P7 68 aa13.06□□□□□ -0.32
SSU72-201ENST00000291386 KRTAP3-1Q9BYR8 98 aa13.01□□□□□ -0.33
SSU72-201ENST00000291386 MT-ATP8P03928 68 aa13□□□□□ -0.33
SSU72-201ENST00000291386 C1orf64Q8NEQ6 169 aa12.99□□□□□ -0.33
SSU72-201ENST00000291386 MT2AP02795 61 aa12.94□□□□□ -0.34
SSU72-201ENST00000291386 C5orf47Q569G3 176 aa12.93□□□□□ -0.34
SSU72-201ENST00000291386 SCGB1A1P11684 91 aa12.92□□□□□ -0.34
SSU72-201ENST00000291386 MP68P56378 58 aa12.92□□□□□ -0.34
SSU72-201ENST00000291386 LINC00208Q96KT6 92 aa12.89□□□□□ -0.35
SSU72-201ENST00000291386 H3BPC8 53 aa12.84□□□□□ -0.35
SSU72-201ENST00000291386 MT1FP04733 61 aa12.83□□□□□ -0.36
SSU72-201ENST00000291386 S4R3F8 94 aa12.8□□□□□ -0.36
SSU72-201ENST00000291386 FAM236AA0A1B0GUQ0 79 aa12.77□□□□□ -0.37
SSU72-201ENST00000291386 FAM236BA0A1B0GV22 79 aa12.77□□□□□ -0.37
SSU72-201ENST00000291386 KLKP1Q107X0 134 aa12.77□□□□□ -0.37
SSU72-201ENST00000291386 KRTAP10-10P60014 251 aa12.76□□□□□ -0.37
SSU72-201ENST00000291386 SMIM20Q8N5G0 67 aa12.75□□□□□ -0.37
SSU72-201ENST00000291386 LCA10Q71F78 164 aa12.72□□□□□ -0.37
SSU72-201ENST00000291386 TRAV7A0A075B6U4 112 aa12.68□□□□□ -0.38
SSU72-201ENST00000291386 A8MUN3 132 aa12.67□□□□□ -0.38
SSU72-201ENST00000291386 KRTAP9-3Q9BYQ3 159 aa12.67□□□□□ -0.38
SSU72-201ENST00000291386 CSAG1Q6PB30 78 aa12.66□□□□□ -0.38
SSU72-201ENST00000291386 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
SSU72-201ENST00000291386 FSIP2Q5CZC0 6907 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms