RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
PDF-201ENST00000288022 SPCS1Q9Y6A9 102 aa13.19□□□□□ -0.3
PDF-201ENST00000288022 A0A1B0GVX0 72 aa13.18□□□□□ -0.3
PDF-201ENST00000288022 KRTAP19-2Q3LHN2 52 aa13.18□□□□□ -0.3
PDF-201ENST00000288022 COL5A1-AS1Q5SY13 56 aa13.18□□□□□ -0.3
PDF-201ENST00000288022 LCE2CQ5TA81 110 aa13.18□□□□□ -0.3
PDF-201ENST00000288022 KRTAP16-1A8MUX0 517 aa13.16□□□□□ -0.3
PDF-201ENST00000288022 C8orf87E5RJ46 101 aa13.14□□□□□ -0.31
PDF-201ENST00000288022 NDUFB1O75438 58 aa13.11□□□□□ -0.31
PDF-201ENST00000288022 COX6B2Q6YFQ2 88 aa13.11□□□□□ -0.31
PDF-201ENST00000288022 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
PDF-201ENST00000288022 NREPQ16612 68 aa13.08□□□□□ -0.32
PDF-201ENST00000288022 A8MWP4 228 aa13.04□□□□□ -0.32
PDF-201ENST00000288022 MT1HP80294 61 aa13.03□□□□□ -0.32
PDF-201ENST00000288022 K7EP34 96 aa13□□□□□ -0.33
PDF-201ENST00000288022 SMCPP49901 116 aaPredicted RBP13□□□□□ -0.33
PDF-201ENST00000288022 IGKV3D-7A0A0C4DH55 119 aa12.98□□□□□ -0.33
PDF-201ENST00000288022 C8orf17Q9NRJ1 99 aa12.97□□□□□ -0.33
PDF-201ENST00000288022 PRO0461Q9UI25 63 aa12.93□□□□□ -0.34
PDF-201ENST00000288022 PRR15Q8IV56 129 aa12.92□□□□□ -0.34
PDF-201ENST00000288022 M0R2T5 61 aa12.9□□□□□ -0.34
PDF-201ENST00000288022 GTF2H5Q6ZYL4 71 aa12.9□□□□□ -0.34
PDF-201ENST00000288022 Q8N9P0 234 aaPredicted RBP12.87□□□□□ -0.35
PDF-201ENST00000288022 ZCCHC13Q8WW36 166 aaKnown RBP12.87□□□□□ -0.35
PDF-201ENST00000288022 BPY2O14599 106 aa12.86□□□□□ -0.35
PDF-201ENST00000288022 Q6ZVQ6 151 aa12.86□□□□□ -0.35
PDF-201ENST00000288022 KRTAP9-2Q9BYQ4 174 aa12.86□□□□□ -0.35
PDF-201ENST00000288022 K7EQZ3 153 aa12.84□□□□□ -0.35
PDF-201ENST00000288022 MMP24-AS1A0A0U1RRL7 71 aa12.81□□□□□ -0.36
PDF-201ENST00000288022 TMEM254Q8TBM7 123 aa12.78□□□□□ -0.36
PDF-201ENST00000288022 MRPL34Q9BQ48 92 aaKnown RBP12.77□□□□□ -0.37
PDF-201ENST00000288022 FAM236DA0A1B0GTK5 79 aa12.76□□□□□ -0.37
PDF-201ENST00000288022 F8W1H4 67 aa12.76□□□□□ -0.37
PDF-201ENST00000288022 FAM236CP0DP71 79 aa12.76□□□□□ -0.37
PDF-201ENST00000288022 hDV103S1A0JD37 113 aa12.75□□□□□ -0.37
PDF-201ENST00000288022 HRES1P13985 223 aa12.75□□□□□ -0.37
PDF-201ENST00000288022 RBM12B-AS1Q9P1G2 102 aa12.75□□□□□ -0.37
PDF-201ENST00000288022 KRTAP10-6P60371 365 aaPredicted RBP12.74□□□□□ -0.37
PDF-201ENST00000288022 UBL5Q9BZL1 73 aa12.74□□□□□ -0.37
PDF-201ENST00000288022 LINC00846Q9NV44 126 aa12.73□□□□□ -0.37
PDF-201ENST00000288022 Q8N9L7 120 aa12.72□□□□□ -0.37
PDF-201ENST00000288022 NDUFS5O43920 106 aa12.71□□□□□ -0.37
PDF-201ENST00000288022 LORP23490 312 aaPredicted RBP12.7□□□□□ -0.38
PDF-201ENST00000288022 SPINK7P58062 85 aa12.7□□□□□ -0.38
PDF-201ENST00000288022 FLGP20930 4061 aaPredicted RBP12.7□□□□□ -0.38
PDF-201ENST00000288022 ETDBQ3ZM63 59 aa12.68□□□□□ -0.38
PDF-201ENST00000288022 MPLKIPQ8TAP9 179 aa12.67□□□□□ -0.38
PDF-201ENST00000288022 WFDC13Q8IUB5 93 aa12.65□□□□□ -0.38
PDF-201ENST00000288022 CASC2Q6XLA1 102 aa12.63□□□□□ -0.39
PDF-201ENST00000288022 LCE2DQ5TA82 110 aaPredicted RBP12.61□□□□□ -0.39
PDF-201ENST00000288022 HCG22E2RYF7 251 aa12.53□□□□□ -0.4
PDF-201ENST00000288022 Q5W150 140 aa12.46□□□□□ -0.41
PDF-201ENST00000288022 CXCL6P80162 114 aa12.45□□□□□ -0.42
PDF-201ENST00000288022 IGKV2D-30A0A075B6S6 120 aa12.44□□□□□ -0.42
PDF-201ENST00000288022 IGKV2-30P06310 120 aa12.44□□□□□ -0.42
PDF-201ENST00000288022 ACYP1P07311 99 aa12.39□□□□□ -0.43
PDF-201ENST00000288022 C7orf65Q6ZTY9 151 aa12.39□□□□□ -0.43
PDF-201ENST00000288022 KRTAP9-6A0A140TA67 174 aa12.35□□□□□ -0.43
PDF-201ENST00000288022 KRTAP9-8Q9BYQ0 159 aa12.35□□□□□ -0.43
PDF-201ENST00000288022 A0A1B0GV90 55 aa12.33□□□□□ -0.44
PDF-201ENST00000288022 FAM240AA0A1B0GVK7 77 aa12.31□□□□□ -0.44
PDF-201ENST00000288022 TP53AIP1Q9HCN2 124 aa12.26□□□□□ -0.45
PDF-201ENST00000288022 H1FX-AS1Q4G0G2 97 aa12.23□□□□□ -0.45
PDF-201ENST00000288022 ATP5EP2Q5VTU8 51 aa12.23□□□□□ -0.45
PDF-201ENST00000288022 MT2AP02795 61 aa12.22□□□□□ -0.45
PDF-201ENST00000288022 CRCT1Q9UGL9 99 aa12.2□□□□□ -0.46
PDF-201ENST00000288022 FSIP2Q5CZC0 6907 aa12.19□□□□□ -0.46
PDF-201ENST00000288022 HIST1H4AP62805 103 aaKnown RBP12.18□□□□□ -0.46
PDF-201ENST00000288022 C4orf26Q17RF5 130 aa12.18□□□□□ -0.46
PDF-201ENST00000288022 MT1FP04733 61 aa12.13□□□□□ -0.47
PDF-201ENST00000288022 KRTAP10-10P60014 251 aa12.13□□□□□ -0.47
PDF-201ENST00000288022 LINC00643Q86TS7 51 aa12.1□□□□□ -0.47
PDF-201ENST00000288022 TRAV22A0A0B4J277 110 aa12.03□□□□□ -0.48
PDF-201ENST00000288022 A0A087WVE0 104 aa12□□□□□ -0.49
PDF-201ENST00000288022 C1orf64Q8NEQ6 169 aa11.99□□□□□ -0.49
PDF-201ENST00000288022 J3QR89 54 aa11.98□□□□□ -0.49
PDF-201ENST00000288022 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.49
PDF-201ENST00000288022 UQCRQO14949 82 aa11.95□□□□□ -0.5
PDF-201ENST00000288022 KRTAP9-3Q9BYQ3 159 aa11.95□□□□□ -0.5
PDF-201ENST00000288022 KRTAP3-1Q9BYR8 98 aa11.94□□□□□ -0.5
PDF-201ENST00000288022 LOC101927531A0A1B0GV80 90 aa11.93□□□□□ -0.5
PDF-201ENST00000288022 H0Y9P7 68 aa11.89□□□□□ -0.51
PDF-201ENST00000288022 S4R3F8 94 aa11.88□□□□□ -0.51
PDF-201ENST00000288022 ATOX1O00244 68 aa11.86□□□□□ -0.51
PDF-201ENST00000288022 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
PDF-201ENST00000288022 LCE2BO14633 110 aa11.85□□□□□ -0.51
PDF-201ENST00000288022 USH2AO75445 5202 aa11.8□□□□□ -0.52
PDF-201ENST00000288022 LCA10Q71F78 164 aa11.78□□□□□ -0.52
PDF-201ENST00000288022 CSAG1Q6PB30 78 aa11.75□□□□□ -0.53
PDF-201ENST00000288022 OCR1Q9BZK8 76 aa11.73□□□□□ -0.53
PDF-201ENST00000288022 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
PDF-201ENST00000288022 MP68P56378 58 aa11.71□□□□□ -0.53
PDF-201ENST00000288022 FAM236AA0A1B0GUQ0 79 aa11.66□□□□□ -0.54
PDF-201ENST00000288022 FAM236BA0A1B0GV22 79 aa11.66□□□□□ -0.54
PDF-201ENST00000288022 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
PDF-201ENST00000288022 SSPOA2VEC9 5147 aa11.63□□□□□ -0.55
PDF-201ENST00000288022 K7ERU9 68 aa11.62□□□□□ -0.55
PDF-201ENST00000288022 KLKP1Q107X0 134 aa11.61□□□□□ -0.55
PDF-201ENST00000288022 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
PDF-201ENST00000288022 KRTAP19-1Q8IUB9 90 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms