RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 A8MWP4 228 aa7.67□□□□□ -1.18
VPS25-201ENST00000253794 UBL5Q9BZL1 73 aa7.67□□□□□ -1.18
VPS25-201ENST00000253794 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
VPS25-201ENST00000253794 DSCR10P59022 87 aa7.65□□□□□ -1.18
VPS25-201ENST00000253794 NDUFB1O75438 58 aa7.64□□□□□ -1.19
VPS25-201ENST00000253794 LINC00313P59037 77 aa7.64□□□□□ -1.19
VPS25-201ENST00000253794 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
VPS25-201ENST00000253794 IGKV3D-7A0A0C4DH55 119 aa7.63□□□□□ -1.19
VPS25-201ENST00000253794 BPY2O14599 106 aa7.63□□□□□ -1.19
VPS25-201ENST00000253794 PRR15Q8IV56 129 aa7.63□□□□□ -1.19
VPS25-201ENST00000253794 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
VPS25-201ENST00000253794 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
VPS25-201ENST00000253794 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
VPS25-201ENST00000253794 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
VPS25-201ENST00000253794 Q75L30 129 aa7.6□□□□□ -1.19
VPS25-201ENST00000253794 A8MUU9 505 aa7.59□□□□□ -1.19
VPS25-201ENST00000253794 K7EQZ3 153 aa7.59□□□□□ -1.19
VPS25-201ENST00000253794 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
VPS25-201ENST00000253794 CXCL6P80162 114 aa7.58□□□□□ -1.2
VPS25-201ENST00000253794 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
VPS25-201ENST00000253794 J3QR89 54 aa7.57□□□□□ -1.2
VPS25-201ENST00000253794 RNF213Q63HN8 5207 aa7.55□□□□□ -1.2
VPS25-201ENST00000253794 MMP24-AS1A0A0U1RRL7 71 aa7.54□□□□□ -1.2
VPS25-201ENST00000253794 ATP5EP2Q5VTU8 51 aa7.53□□□□□ -1.2
VPS25-201ENST00000253794 Q8N9P0 234 aaPredicted RBP7.52□□□□□ -1.21
VPS25-201ENST00000253794 Q8N9L7 120 aa7.51□□□□□ -1.21
VPS25-201ENST00000253794 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
VPS25-201ENST00000253794 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
VPS25-201ENST00000253794 LINC00643Q86TS7 51 aa7.5□□□□□ -1.21
VPS25-201ENST00000253794 MUC2Q02817 5179 aa7.49□□□□□ -1.21
VPS25-201ENST00000253794 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
VPS25-201ENST00000253794 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
VPS25-201ENST00000253794 MRPL34Q9BQ48 92 aaKnown RBP7.47□□□□□ -1.21
VPS25-201ENST00000253794 K7ERU9 68 aa7.46□□□□□ -1.22
VPS25-201ENST00000253794 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
VPS25-201ENST00000253794 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
VPS25-201ENST00000253794 CASC2Q6XLA1 102 aa7.44□□□□□ -1.22
VPS25-201ENST00000253794 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
VPS25-201ENST00000253794 ZCCHC13Q8WW36 166 aaKnown RBP7.4□□□□□ -1.22
VPS25-201ENST00000253794 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
VPS25-201ENST00000253794 NDUFS5O43920 106 aa7.33□□□□□ -1.24
VPS25-201ENST00000253794 TP53AIP1Q9HCN2 124 aa7.31□□□□□ -1.24
VPS25-201ENST00000253794 A0A087WVE0 104 aa7.3□□□□□ -1.24
VPS25-201ENST00000253794 IMUPQ9GZP8 106 aa7.3□□□□□ -1.24
VPS25-201ENST00000253794 FAT4Q6V0I7 4981 aa7.29□□□□□ -1.24
VPS25-201ENST00000253794 A0A0U1RQV1 116 aa7.29□□□□□ -1.24
VPS25-201ENST00000253794 Q5W150 140 aa7.28□□□□□ -1.24
VPS25-201ENST00000253794 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
VPS25-201ENST00000253794 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
VPS25-201ENST00000253794 SPINK7P58062 85 aa7.24□□□□□ -1.25
VPS25-201ENST00000253794 HRES1P13985 223 aa7.23□□□□□ -1.25
VPS25-201ENST00000253794 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
VPS25-201ENST00000253794 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
VPS25-201ENST00000253794 UQCRQO14949 82 aa7.19□□□□□ -1.26
VPS25-201ENST00000253794 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
VPS25-201ENST00000253794 OCR1Q9BZK8 76 aa7.18□□□□□ -1.26
VPS25-201ENST00000253794 TRAV22A0A0B4J277 110 aa7.17□□□□□ -1.26
VPS25-201ENST00000253794 FLGP20930 4061 aaPredicted RBP7.17□□□□□ -1.26
VPS25-201ENST00000253794 IGKV2-30P06310 120 aa7.16□□□□□ -1.26
VPS25-201ENST00000253794 IGKV2D-30A0A075B6S6 120 aa7.14□□□□□ -1.27
VPS25-201ENST00000253794 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
VPS25-201ENST00000253794 ATOX1O00244 68 aa7.13□□□□□ -1.27
VPS25-201ENST00000253794 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
VPS25-201ENST00000253794 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
VPS25-201ENST00000253794 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
VPS25-201ENST00000253794 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
VPS25-201ENST00000253794 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
VPS25-201ENST00000253794 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
VPS25-201ENST00000253794 H0Y9P7 68 aa7.09□□□□□ -1.27
VPS25-201ENST00000253794 MT1HP80294 61 aa7.08□□□□□ -1.28
VPS25-201ENST00000253794 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
VPS25-201ENST00000253794 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
VPS25-201ENST00000253794 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
VPS25-201ENST00000253794 H3BPC8 53 aa7.05□□□□□ -1.28
VPS25-201ENST00000253794 FAM236DA0A1B0GTK5 79 aa7.04□□□□□ -1.28
VPS25-201ENST00000253794 FAM236CP0DP71 79 aa7.04□□□□□ -1.28
VPS25-201ENST00000253794 MP68P56378 58 aa7.04□□□□□ -1.28
VPS25-201ENST00000253794 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
VPS25-201ENST00000253794 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.29
VPS25-201ENST00000253794 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
VPS25-201ENST00000253794 C4orf26Q17RF5 130 aa6.99□□□□□ -1.29
VPS25-201ENST00000253794 H1FX-AS1Q4G0G2 97 aa6.96□□□□□ -1.3
VPS25-201ENST00000253794 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
VPS25-201ENST00000253794 SERP2Q8N6R1 65 aa6.94□□□□□ -1.3
VPS25-201ENST00000253794 KLKP1Q107X0 134 aa6.92□□□□□ -1.3
VPS25-201ENST00000253794 M0R2T5 61 aa6.9□□□□□ -1.3
VPS25-201ENST00000253794 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
VPS25-201ENST00000253794 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
VPS25-201ENST00000253794 A8MUN3 132 aa6.85□□□□□ -1.31
VPS25-201ENST00000253794 COX7CP15954 63 aa6.83□□□□□ -1.32
VPS25-201ENST00000253794 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
VPS25-201ENST00000253794 SNURFQ9Y675 71 aa6.8□□□□□ -1.32
VPS25-201ENST00000253794 S4R3F8 94 aa6.79□□□□□ -1.32
VPS25-201ENST00000253794 DMAC1Q96GE9 116 aa6.78□□□□□ -1.32
VPS25-201ENST00000253794 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
VPS25-201ENST00000253794 LCA10Q71F78 164 aa6.76□□□□□ -1.33
VPS25-201ENST00000253794 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
VPS25-201ENST00000253794 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
VPS25-201ENST00000253794 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
VPS25-201ENST00000253794 CSAG1Q6PB30 78 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms