RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 C8orf87E5RJ46 101 aa12.39□□□□□ -0.43
APOE-201ENST00000252486 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
APOE-201ENST00000252486 IGHV6-1A0A0B4J1U7 121 aa12.38□□□□□ -0.43
APOE-201ENST00000252486 UBR4Q5T4S7 5183 aa12.37□□□□□ -0.43
APOE-201ENST00000252486 BPY2O14599 106 aa12.37□□□□□ -0.43
APOE-201ENST00000252486 DSCR10P59022 87 aa12.37□□□□□ -0.43
APOE-201ENST00000252486 ACYP1P07311 99 aa12.35□□□□□ -0.43
APOE-201ENST00000252486 RPL37P61927 97 aaKnown RBP12.33□□□□□ -0.44
APOE-201ENST00000252486 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
APOE-201ENST00000252486 FAM240AA0A1B0GVK7 77 aa12.31□□□□□ -0.44
APOE-201ENST00000252486 Q75L30 129 aa12.31□□□□□ -0.44
APOE-201ENST00000252486 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
APOE-201ENST00000252486 NOTCH2NLQ7Z3S9 236 aa12.28□□□□□ -0.44
APOE-201ENST00000252486 C20orf166-AS1Q96NR2 134 aa12.28□□□□□ -0.44
APOE-201ENST00000252486 A8MUU9 505 aa12.25□□□□□ -0.45
APOE-201ENST00000252486 KRTAP16-1A8MUX0 517 aa12.25□□□□□ -0.45
APOE-201ENST00000252486 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
APOE-201ENST00000252486 MUC17Q685J3 4493 aa12.25□□□□□ -0.45
APOE-201ENST00000252486 K7EQZ3 153 aa12.23□□□□□ -0.45
APOE-201ENST00000252486 J3QR89 54 aa12.21□□□□□ -0.45
APOE-201ENST00000252486 PCOTHQ58A44 107 aa12.21□□□□□ -0.45
APOE-201ENST00000252486 ATP11AUNQ6ZP68 121 aa12.2□□□□□ -0.46
APOE-201ENST00000252486 CXCL6P80162 114 aa12.19□□□□□ -0.46
APOE-201ENST00000252486 RNF213Q63HN8 5207 aa12.17□□□□□ -0.46
APOE-201ENST00000252486 MMP24-AS1A0A0U1RRL7 71 aa12.15□□□□□ -0.46
APOE-201ENST00000252486 Q8N9L7 120 aa12.13□□□□□ -0.47
APOE-201ENST00000252486 TMEM254Q8TBM7 123 aa12.12□□□□□ -0.47
APOE-201ENST00000252486 hDV103S1A0JD37 113 aa12.11□□□□□ -0.47
APOE-201ENST00000252486 ATP5EP2Q5VTU8 51 aa12.11□□□□□ -0.47
APOE-201ENST00000252486 Q8N9P0 234 aaPredicted RBP12.11□□□□□ -0.47
APOE-201ENST00000252486 MRPL34Q9BQ48 92 aaKnown RBP12.09□□□□□ -0.47
APOE-201ENST00000252486 LINC00643Q86TS7 51 aa12.06□□□□□ -0.48
APOE-201ENST00000252486 CASC2Q6XLA1 102 aa12.05□□□□□ -0.48
APOE-201ENST00000252486 KRTAP4-1Q9BYQ7 146 aa12.03□□□□□ -0.48
APOE-201ENST00000252486 HCG22E2RYF7 251 aa12.02□□□□□ -0.49
APOE-201ENST00000252486 WFDC13Q8IUB5 93 aa12.01□□□□□ -0.49
APOE-201ENST00000252486 A0A0U1RQV1 116 aa12□□□□□ -0.49
APOE-201ENST00000252486 K7ERU9 68 aa11.99□□□□□ -0.49
APOE-201ENST00000252486 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
APOE-201ENST00000252486 NDUFS5O43920 106 aa11.96□□□□□ -0.49
APOE-201ENST00000252486 MUC2Q02817 5179 aa11.95□□□□□ -0.5
APOE-201ENST00000252486 HIST1H4AP62805 103 aaKnown RBP11.91□□□□□ -0.5
APOE-201ENST00000252486 TP53AIP1Q9HCN2 124 aa11.81□□□□□ -0.52
APOE-201ENST00000252486 A0A087WVE0 104 aa11.75□□□□□ -0.53
APOE-201ENST00000252486 SPINK7P58062 85 aa11.75□□□□□ -0.53
APOE-201ENST00000252486 Q5W150 140 aa11.74□□□□□ -0.53
APOE-201ENST00000252486 IMUPQ9GZP8 106 aa11.7□□□□□ -0.54
APOE-201ENST00000252486 KRTAP19-2Q3LHN2 52 aa11.69□□□□□ -0.54
APOE-201ENST00000252486 HRES1P13985 223 aa11.67□□□□□ -0.54
APOE-201ENST00000252486 COX6B2Q6YFQ2 88 aa11.67□□□□□ -0.54
APOE-201ENST00000252486 RBM12B-AS1Q9P1G2 102 aa11.66□□□□□ -0.54
APOE-201ENST00000252486 C7orf65Q6ZTY9 151 aa11.65□□□□□ -0.54
APOE-201ENST00000252486 MT-ATP8P03928 68 aa11.63□□□□□ -0.55
APOE-201ENST00000252486 FAT4Q6V0I7 4981 aa11.62□□□□□ -0.55
APOE-201ENST00000252486 IGKV2D-30A0A075B6S6 120 aa11.62□□□□□ -0.55
APOE-201ENST00000252486 UQCRQO14949 82 aa11.62□□□□□ -0.55
APOE-201ENST00000252486 IGKV2-30P06310 120 aa11.62□□□□□ -0.55
APOE-201ENST00000252486 LCE2CQ5TA81 110 aa11.62□□□□□ -0.55
APOE-201ENST00000252486 MPLKIPQ8TAP9 179 aa11.62□□□□□ -0.55
APOE-201ENST00000252486 TRAV22A0A0B4J277 110 aa11.59□□□□□ -0.55
APOE-201ENST00000252486 FAM236DA0A1B0GTK5 79 aa11.56□□□□□ -0.56
APOE-201ENST00000252486 FAM236CP0DP71 79 aa11.56□□□□□ -0.56
APOE-201ENST00000252486 SCGB1A1P11684 91 aa11.54□□□□□ -0.56
APOE-201ENST00000252486 LCE2AQ5TA79 106 aaPredicted RBP11.53□□□□□ -0.56
APOE-201ENST00000252486 ATOX1O00244 68 aa11.52□□□□□ -0.57
APOE-201ENST00000252486 OCR1Q9BZK8 76 aa11.51□□□□□ -0.57
APOE-201ENST00000252486 LOC101927531A0A1B0GV80 90 aa11.48□□□□□ -0.57
APOE-201ENST00000252486 H0Y9P7 68 aa11.48□□□□□ -0.57
APOE-201ENST00000252486 MT1HP80294 61 aa11.46□□□□□ -0.57
APOE-201ENST00000252486 FAM236AA0A1B0GUQ0 79 aa11.43□□□□□ -0.58
APOE-201ENST00000252486 FAM236BA0A1B0GV22 79 aa11.43□□□□□ -0.58
APOE-201ENST00000252486 MP68P56378 58 aa11.42□□□□□ -0.58
APOE-201ENST00000252486 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
APOE-201ENST00000252486 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
APOE-201ENST00000252486 CYP4F30PQ9H0H9 118 aa11.41□□□□□ -0.58
APOE-201ENST00000252486 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
APOE-201ENST00000252486 H3BPC8 53 aa11.35□□□□□ -0.59
APOE-201ENST00000252486 M0R2T5 61 aa11.35□□□□□ -0.59
APOE-201ENST00000252486 C4orf26Q17RF5 130 aa11.35□□□□□ -0.59
APOE-201ENST00000252486 LINC00208Q96KT6 92 aa11.35□□□□□ -0.59
APOE-201ENST00000252486 FLGP20930 4061 aaPredicted RBP11.34□□□□□ -0.59
APOE-201ENST00000252486 TRAV7A0A075B6U4 112 aa11.31□□□□□ -0.6
APOE-201ENST00000252486 H1FX-AS1Q4G0G2 97 aa11.3□□□□□ -0.6
APOE-201ENST00000252486 KRTAP9-2Q9BYQ4 174 aa11.23□□□□□ -0.61
APOE-201ENST00000252486 KRTAP10-6P60371 365 aaPredicted RBP11.17□□□□□ -0.62
APOE-201ENST00000252486 KRTAP3-1Q9BYR8 98 aa11.16□□□□□ -0.62
APOE-201ENST00000252486 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
APOE-201ENST00000252486 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
APOE-201ENST00000252486 LORP23490 312 aaPredicted RBP11.13□□□□□ -0.63
APOE-201ENST00000252486 A8MUN3 132 aa11.07□□□□□ -0.64
APOE-201ENST00000252486 S4R3F8 94 aa11.04□□□□□ -0.64
APOE-201ENST00000252486 C20orf197Q8N268 126 aa10.98□□□□□ -0.65
APOE-201ENST00000252486 KRTAP9-6A0A140TA67 174 aa10.97□□□□□ -0.65
APOE-201ENST00000252486 SNURFQ9Y675 71 aa10.96□□□□□ -0.65
APOE-201ENST00000252486 COX7CP15954 63 aa10.95□□□□□ -0.66
APOE-201ENST00000252486 LCA10Q71F78 164 aa10.94□□□□□ -0.66
APOE-201ENST00000252486 KRTAP9-8Q9BYQ0 159 aa10.94□□□□□ -0.66
APOE-201ENST00000252486 CSAG1Q6PB30 78 aa10.91□□□□□ -0.66
APOE-201ENST00000252486 DMAC1Q96GE9 116 aa10.9□□□□□ -0.66
APOE-201ENST00000252486 ANAPC13Q9BS18 74 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms