RNA–Protein interactions for RNA: ENST00000219255.3

PARD6A-201, Transcript of par-6 family cell polarity regulator alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PARD6A, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6A-201ENST00000219255 J3KT08 172 aa12.83□□□□□ -0.36
PARD6A-201ENST00000219255 KRTAP9-8Q9BYQ0 159 aa12.78□□□□□ -0.36
PARD6A-201ENST00000219255 NDUFB1O75438 58 aa12.76□□□□□ -0.37
PARD6A-201ENST00000219255 HRES1P13985 223 aa12.76□□□□□ -0.37
PARD6A-201ENST00000219255 ATXN8Q156A1 80 aa12.75□□□□□ -0.37
PARD6A-201ENST00000219255 MTURNQ8N3F0 131 aa12.75□□□□□ -0.37
PARD6A-201ENST00000219255 M0R143 59 aa12.74□□□□□ -0.37
PARD6A-201ENST00000219255 Q6ZQT0 140 aa12.74□□□□□ -0.37
PARD6A-201ENST00000219255 MPLKIPQ8TAP9 179 aa12.74□□□□□ -0.37
PARD6A-201ENST00000219255 JMJD7-PLA2G4BH0Y9G9 81 aa12.73□□□□□ -0.37
PARD6A-201ENST00000219255 ZCCHC13Q8WW36 166 aaKnown RBP12.7□□□□□ -0.38
PARD6A-201ENST00000219255 A0A1B0GW54 56 aa12.69□□□□□ -0.38
PARD6A-201ENST00000219255 PDE6GP18545 87 aa12.66□□□□□ -0.38
PARD6A-201ENST00000219255 LOC110117498A0A087WWA1 95 aa12.63□□□□□ -0.39
PARD6A-201ENST00000219255 LYRM7Q5U5X0 104 aa12.63□□□□□ -0.39
PARD6A-201ENST00000219255 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
PARD6A-201ENST00000219255 SPINK7P58062 85 aa12.62□□□□□ -0.39
PARD6A-201ENST00000219255 A8MWP4 228 aa12.61□□□□□ -0.39
PARD6A-201ENST00000219255 Q8N9P0 234 aaPredicted RBP12.61□□□□□ -0.39
PARD6A-201ENST00000219255 MT2AP02795 61 aa12.6□□□□□ -0.39
PARD6A-201ENST00000219255 C8orf17Q9NRJ1 99 aa12.59□□□□□ -0.39
PARD6A-201ENST00000219255 C14orf132Q9NPU4 83 aa12.55□□□□□ -0.4
PARD6A-201ENST00000219255 KRTAP10-10P60014 251 aa12.53□□□□□ -0.4
PARD6A-201ENST00000219255 IGKV3D-7A0A0C4DH55 119 aa12.52□□□□□ -0.41
PARD6A-201ENST00000219255 NREPQ16612 68 aa12.52□□□□□ -0.41
PARD6A-201ENST00000219255 Q6ZVQ6 151 aa12.5□□□□□ -0.41
PARD6A-201ENST00000219255 MT1FP04733 61 aa12.49□□□□□ -0.41
PARD6A-201ENST00000219255 SMIM6P0DI80 62 aa12.48□□□□□ -0.41
PARD6A-201ENST00000219255 USH2AO75445 5202 aa12.47□□□□□ -0.41
PARD6A-201ENST00000219255 PRR15Q8IV56 129 aa12.47□□□□□ -0.41
PARD6A-201ENST00000219255 WFDC13Q8IUB5 93 aa12.45□□□□□ -0.42
PARD6A-201ENST00000219255 BATFQ16520 125 aa12.43□□□□□ -0.42
PARD6A-201ENST00000219255 TSTD3H0UI37 97 aa12.42□□□□□ -0.42
PARD6A-201ENST00000219255 TMEM254Q8TBM7 123 aa12.4□□□□□ -0.42
PARD6A-201ENST00000219255 MRPL34Q9BQ48 92 aaKnown RBP12.39□□□□□ -0.43
PARD6A-201ENST00000219255 KRTAP9-3Q9BYQ3 159 aa12.38□□□□□ -0.43
PARD6A-201ENST00000219255 SSPOA2VEC9 5147 aa12.38□□□□□ -0.43
PARD6A-201ENST00000219255 MMP24-AS1A0A0U1RRL7 71 aa12.35□□□□□ -0.43
PARD6A-201ENST00000219255 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.35□□□□□ -0.43
PARD6A-201ENST00000219255 LCE2BO14633 110 aa12.35□□□□□ -0.43
PARD6A-201ENST00000219255 H3BT86 120 aa12.34□□□□□ -0.43
PARD6A-201ENST00000219255 hDV103S1A0JD37 113 aa12.33□□□□□ -0.44
PARD6A-201ENST00000219255 NDUFS5O43920 106 aa12.33□□□□□ -0.44
PARD6A-201ENST00000219255 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
PARD6A-201ENST00000219255 K7EQZ3 153 aa12.29□□□□□ -0.44
PARD6A-201ENST00000219255 KRTAP9-7A8MTY7 169 aa12.26□□□□□ -0.45
PARD6A-201ENST00000219255 BPY2O14599 106 aa12.26□□□□□ -0.45
PARD6A-201ENST00000219255 A0A1W2PPM0 123 aa12.25□□□□□ -0.45
PARD6A-201ENST00000219255 KRTAP19-1Q8IUB9 90 aa12.25□□□□□ -0.45
PARD6A-201ENST00000219255 H1FX-AS1Q4G0G2 97 aa12.21□□□□□ -0.45
PARD6A-201ENST00000219255 TAX1BP3O14907 124 aa12.2□□□□□ -0.46
PARD6A-201ENST00000219255 LINC00846Q9NV44 126 aa12.2□□□□□ -0.46
PARD6A-201ENST00000219255 FCGBPQ9Y6R7 5405 aaPredicted RBP12.17□□□□□ -0.46
PARD6A-201ENST00000219255 IGKV2D-30A0A075B6S6 120 aa12.16□□□□□ -0.46
PARD6A-201ENST00000219255 IGKV2-30P06310 120 aa12.16□□□□□ -0.46
PARD6A-201ENST00000219255 C7orf65Q6ZTY9 151 aa12.15□□□□□ -0.46
PARD6A-201ENST00000219255 CASC2Q6XLA1 102 aa12.12□□□□□ -0.47
PARD6A-201ENST00000219255 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.48
PARD6A-201ENST00000219255 Q5W150 140 aa12.07□□□□□ -0.48
PARD6A-201ENST00000219255 Q8N9L7 120 aa12.07□□□□□ -0.48
PARD6A-201ENST00000219255 HCG22E2RYF7 251 aa12.06□□□□□ -0.48
PARD6A-201ENST00000219255 CXCL6P80162 114 aa12.02□□□□□ -0.49
PARD6A-201ENST00000219255 LOC105371267A0A1B0GV96 52 aa12.01□□□□□ -0.49
PARD6A-201ENST00000219255 UBL5Q9BZL1 73 aa12□□□□□ -0.49
PARD6A-201ENST00000219255 KRTAP19-6Q3LI70 58 aa11.99□□□□□ -0.49
PARD6A-201ENST00000219255 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
PARD6A-201ENST00000219255 C4orf26Q17RF5 130 aa11.94□□□□□ -0.5
PARD6A-201ENST00000219255 MACF1Q9UPN3 7388 aaKnown RBP11.91□□□□□ -0.5
PARD6A-201ENST00000219255 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.5
PARD6A-201ENST00000219255 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
PARD6A-201ENST00000219255 K7EP34 96 aa11.82□□□□□ -0.52
PARD6A-201ENST00000219255 SYNE2Q8WXH0 6885 aaKnown RBP11.82□□□□□ -0.52
PARD6A-201ENST00000219255 C5orf47Q569G3 176 aa11.78□□□□□ -0.52
PARD6A-201ENST00000219255 TP53AIP1Q9HCN2 124 aa11.76□□□□□ -0.53
PARD6A-201ENST00000219255 FAM236AA0A1B0GUQ0 79 aa11.75□□□□□ -0.53
PARD6A-201ENST00000219255 FAM236BA0A1B0GV22 79 aa11.75□□□□□ -0.53
PARD6A-201ENST00000219255 S4R3F8 94 aa11.75□□□□□ -0.53
PARD6A-201ENST00000219255 C1orf64Q8NEQ6 169 aa11.73□□□□□ -0.53
PARD6A-201ENST00000219255 GTF2H5Q6ZYL4 71 aa11.72□□□□□ -0.53
PARD6A-201ENST00000219255 CSAG1Q6PB30 78 aa11.7□□□□□ -0.54
PARD6A-201ENST00000219255 KRTAP3-1Q9BYR8 98 aa11.68□□□□□ -0.54
PARD6A-201ENST00000219255 F8W1H4 67 aa11.64□□□□□ -0.55
PARD6A-201ENST00000219255 LCA10Q71F78 164 aa11.61□□□□□ -0.55
PARD6A-201ENST00000219255 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
PARD6A-201ENST00000219255 KRTAP6-3Q3LI67 103 aa11.52□□□□□ -0.57
PARD6A-201ENST00000219255 Q5VV11 94 aa11.51□□□□□ -0.57
PARD6A-201ENST00000219255 CYP4F30PQ9H0H9 118 aa11.49□□□□□ -0.57
PARD6A-201ENST00000219255 A6NN06 94 aa11.46□□□□□ -0.57
PARD6A-201ENST00000219255 SPRR2GQ9BYE4 73 aa11.46□□□□□ -0.57
PARD6A-201ENST00000219255 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
PARD6A-201ENST00000219255 LOC101927531A0A1B0GV80 90 aa11.44□□□□□ -0.58
PARD6A-201ENST00000219255 KLKP1Q107X0 134 aa11.43□□□□□ -0.58
PARD6A-201ENST00000219255 PCP4L1A6NKN8 68 aa11.42□□□□□ -0.58
PARD6A-201ENST00000219255 ACYP1P07311 99 aa11.42□□□□□ -0.58
PARD6A-201ENST00000219255 MT1BP07438 61 aa11.4□□□□□ -0.58
PARD6A-201ENST00000219255 KRTAP19-8Q3LI54 63 aa11.4□□□□□ -0.58
PARD6A-201ENST00000219255 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
PARD6A-201ENST00000219255 ATP5EP2Q5VTU8 51 aa11.35□□□□□ -0.59
PARD6A-201ENST00000219255 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
PARD6A-201ENST00000219255 CRIPTQ9P021 101 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms