RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 XP32Q5T750 250 aa10.89□□□□□ -0.67
KDELR3-201ENST00000216014 Q8N9L7 120 aa10.89□□□□□ -0.67
KDELR3-201ENST00000216014 A0A1B0GVX0 72 aa10.87□□□□□ -0.67
KDELR3-201ENST00000216014 BPY2O14599 106 aa10.87□□□□□ -0.67
KDELR3-201ENST00000216014 A8MWP4 228 aa10.87□□□□□ -0.67
KDELR3-201ENST00000216014 K7EQZ3 153 aa10.87□□□□□ -0.67
KDELR3-201ENST00000216014 ACYP1P07311 99 aa10.87□□□□□ -0.67
KDELR3-201ENST00000216014 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
KDELR3-201ENST00000216014 MUC17Q685J3 4493 aa10.83□□□□□ -0.68
KDELR3-201ENST00000216014 KRTAP16-1A8MUX0 517 aa10.83□□□□□ -0.68
KDELR3-201ENST00000216014 PRR15Q8IV56 129 aa10.82□□□□□ -0.68
KDELR3-201ENST00000216014 LINC00313P59037 77 aa10.8□□□□□ -0.68
KDELR3-201ENST00000216014 C8orf17Q9NRJ1 99 aa10.77□□□□□ -0.69
KDELR3-201ENST00000216014 MMP24-AS1A0A0U1RRL7 71 aa10.76□□□□□ -0.69
KDELR3-201ENST00000216014 J3QR89 54 aa10.76□□□□□ -0.69
KDELR3-201ENST00000216014 NDUFB1O75438 58 aa10.76□□□□□ -0.69
KDELR3-201ENST00000216014 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
KDELR3-201ENST00000216014 C8orf87E5RJ46 101 aa10.73□□□□□ -0.69
KDELR3-201ENST00000216014 CXCL6P80162 114 aa10.73□□□□□ -0.69
KDELR3-201ENST00000216014 K7ERU9 68 aa10.7□□□□□ -0.7
KDELR3-201ENST00000216014 LINC00643Q86TS7 51 aa10.7□□□□□ -0.7
KDELR3-201ENST00000216014 RPL37P61927 97 aaKnown RBP10.7□□□□□ -0.7
KDELR3-201ENST00000216014 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
KDELR3-201ENST00000216014 A8MUU9 505 aa10.69□□□□□ -0.7
KDELR3-201ENST00000216014 MUC2Q02817 5179 aa10.67□□□□□ -0.7
KDELR3-201ENST00000216014 Q75L30 129 aa10.67□□□□□ -0.7
KDELR3-201ENST00000216014 WFDC13Q8IUB5 93 aa10.66□□□□□ -0.7
KDELR3-201ENST00000216014 PCOTHQ58A44 107 aa10.64□□□□□ -0.71
KDELR3-201ENST00000216014 ATP5EP2Q5VTU8 51 aa10.64□□□□□ -0.71
KDELR3-201ENST00000216014 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
KDELR3-201ENST00000216014 hDV103S1A0JD37 113 aa10.62□□□□□ -0.71
KDELR3-201ENST00000216014 Q8N9P0 234 aaPredicted RBP10.61□□□□□ -0.71
KDELR3-201ENST00000216014 A0A087WVE0 104 aa10.6□□□□□ -0.71
KDELR3-201ENST00000216014 CASC2Q6XLA1 102 aa10.6□□□□□ -0.71
KDELR3-201ENST00000216014 TMEM254Q8TBM7 123 aa10.6□□□□□ -0.71
KDELR3-201ENST00000216014 HCG22E2RYF7 251 aa10.59□□□□□ -0.71
KDELR3-201ENST00000216014 MRPL34Q9BQ48 92 aaKnown RBP10.59□□□□□ -0.71
KDELR3-201ENST00000216014 HIST1H4AP62805 103 aaKnown RBP10.58□□□□□ -0.72
KDELR3-201ENST00000216014 MT-ATP8P03928 68 aa10.57□□□□□ -0.72
KDELR3-201ENST00000216014 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
KDELR3-201ENST00000216014 ATP11AUNQ6ZP68 121 aa10.5□□□□□ -0.73
KDELR3-201ENST00000216014 NDUFS5O43920 106 aa10.48□□□□□ -0.73
KDELR3-201ENST00000216014 Q5W150 140 aa10.46□□□□□ -0.74
KDELR3-201ENST00000216014 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.74
KDELR3-201ENST00000216014 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
KDELR3-201ENST00000216014 KRTAP19-2Q3LHN2 52 aa10.29□□□□□ -0.76
KDELR3-201ENST00000216014 OCR1Q9BZK8 76 aa10.28□□□□□ -0.76
KDELR3-201ENST00000216014 FAT4Q6V0I7 4981 aa10.28□□□□□ -0.76
KDELR3-201ENST00000216014 SPINK7P58062 85 aa10.27□□□□□ -0.76
KDELR3-201ENST00000216014 FAM236AA0A1B0GUQ0 79 aa10.27□□□□□ -0.77
KDELR3-201ENST00000216014 FAM236BA0A1B0GV22 79 aa10.27□□□□□ -0.77
KDELR3-201ENST00000216014 TP53AIP1Q9HCN2 124 aa10.27□□□□□ -0.77
KDELR3-201ENST00000216014 HRES1P13985 223 aa10.24□□□□□ -0.77
KDELR3-201ENST00000216014 IGKV2D-30A0A075B6S6 120 aa10.21□□□□□ -0.77
KDELR3-201ENST00000216014 IGKV2-30P06310 120 aa10.21□□□□□ -0.77
KDELR3-201ENST00000216014 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
KDELR3-201ENST00000216014 UQCRQO14949 82 aa10.19□□□□□ -0.78
KDELR3-201ENST00000216014 TRAV22A0A0B4J277 110 aa10.18□□□□□ -0.78
KDELR3-201ENST00000216014 SCGB1A1P11684 91 aa10.18□□□□□ -0.78
KDELR3-201ENST00000216014 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
KDELR3-201ENST00000216014 H0Y9P7 68 aa10.15□□□□□ -0.78
KDELR3-201ENST00000216014 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
KDELR3-201ENST00000216014 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
KDELR3-201ENST00000216014 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
KDELR3-201ENST00000216014 LINC00208Q96KT6 92 aa10.05□□□□□ -0.8
KDELR3-201ENST00000216014 TRAV7A0A075B6U4 112 aa10.04□□□□□ -0.8
KDELR3-201ENST00000216014 ATOX1O00244 68 aa10.04□□□□□ -0.8
KDELR3-201ENST00000216014 C1orf64Q8NEQ6 169 aa10.04□□□□□ -0.8
KDELR3-201ENST00000216014 C5orf47Q569G3 176 aa10.02□□□□□ -0.8
KDELR3-201ENST00000216014 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.81
KDELR3-201ENST00000216014 C4orf26Q17RF5 130 aa10.02□□□□□ -0.81
KDELR3-201ENST00000216014 KLKP1Q107X0 134 aa9.99□□□□□ -0.81
KDELR3-201ENST00000216014 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
KDELR3-201ENST00000216014 MP68P56378 58 aa9.99□□□□□ -0.81
KDELR3-201ENST00000216014 SMIM20Q8N5G0 67 aa9.98□□□□□ -0.81
KDELR3-201ENST00000216014 MT1HP80294 61 aa9.97□□□□□ -0.81
KDELR3-201ENST00000216014 RBM12B-AS1Q9P1G2 102 aa9.97□□□□□ -0.81
KDELR3-201ENST00000216014 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
KDELR3-201ENST00000216014 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
KDELR3-201ENST00000216014 A0A0U1RQV1 116 aa9.94□□□□□ -0.82
KDELR3-201ENST00000216014 FAM236DA0A1B0GTK5 79 aa9.94□□□□□ -0.82
KDELR3-201ENST00000216014 FAM236CP0DP71 79 aa9.94□□□□□ -0.82
KDELR3-201ENST00000216014 SERP2Q8N6R1 65 aa9.94□□□□□ -0.82
KDELR3-201ENST00000216014 H3BPC8 53 aa9.9□□□□□ -0.83
KDELR3-201ENST00000216014 SNURFQ9Y675 71 aa9.88□□□□□ -0.83
KDELR3-201ENST00000216014 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
KDELR3-201ENST00000216014 COX7CP15954 63 aa9.82□□□□□ -0.84
KDELR3-201ENST00000216014 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
KDELR3-201ENST00000216014 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
KDELR3-201ENST00000216014 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
KDELR3-201ENST00000216014 M0R2T5 61 aa9.71□□□□□ -0.85
KDELR3-201ENST00000216014 CCDC179H3BU77 68 aa9.69□□□□□ -0.86
KDELR3-201ENST00000216014 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
KDELR3-201ENST00000216014 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.87
KDELR3-201ENST00000216014 LCA10Q71F78 164 aa9.64□□□□□ -0.87
KDELR3-201ENST00000216014 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
KDELR3-201ENST00000216014 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
KDELR3-201ENST00000216014 S4R3F8 94 aa9.62□□□□□ -0.87
KDELR3-201ENST00000216014 H7BZZ5 65 aa9.59□□□□□ -0.87
KDELR3-201ENST00000216014 A8MUN3 132 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms