RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 AvpP35455 168 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm7849D3YX03 116 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ighv3-6P18531 116 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 MdfiP70331 251 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm28038F7BCN9 126 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Trav7d-3Q5R1I1 112 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 RhohQ9D3G9 191 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm33815A0A087WNV3 176 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 P03985 172 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Nup210Q9QY81 1886 aaKnown RBP12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Tmem52Q9D702 196 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 MalO09198 153 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Zcwpw2Q08EN7 125 aa12.69□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm28778A0A087WSK7 233 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ighv8-6A0A0A6YXA3 118 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm10521E9PZK0 135 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Lhfpl1Q80SV1 220 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Q80X32 188 aaKnown RBP12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Tmem30bQ8BHG3 353 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ndufc2Q9CQ54 120 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ighv1-58A0A075B5W9 117 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 BC035044E0CXF8 138 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 GrnP28798 589 aaKnown RBP12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Lsm4Q9QXA5 137 aaKnown RBP12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ighv1-39A0A075B5V5 117 aa12.68□□□□□ -0.38
Clcn3-203ENSMUST00000093490 TdhQ8K3F7 373 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Igkv19-93A0A0G2JFZ3 115 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm5089A1L3C8 106 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ly6c1P0CW02 131 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm10384Q3UQ87 92 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 SbpP15501 199 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Shank1D3YZU1 2167 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Inafm1E9PV59 130 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Defa26Q3L180 93 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 9130213A22RikQ3V3T2 120 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Mfap4Q9D1H9 257 aa12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Tnrc6aQ3UHK8 1896 aaKnown RBP12.67□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Q8R092 253 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 P01788 123 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 PerpQ9JK95 193 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Ptprz1B9EKR1 2312 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm10767Q3TQP0 103 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Abca7Q91V24 2159 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm28269A0A087WSG3 125 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm12169F2Z474 250 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Zfp248Q640N4 576 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Igkv12-89A0A0G2JGW8 112 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Defa28D3Z1V9 94 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Defa25Q5G864 92 aa12.66□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Rnf144bQ8BKD6 301 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Mogat1Q91ZV4 335 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Card19Q9D1I2 183 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Prok2Q9QXU7 128 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Rpl36aP83882 106 aaKnown RBP12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Nat8b-psE0CYC6 232 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Fbxl15Q91W61 300 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gemin7Q9CWY4 129 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Rai1Q61818 1889 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gm29423A0A087WRM1 55 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Wisp3D3Z5L9 354 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Fhl4Q8CDC8 279 aa12.65□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Igkv4-90A0A075B5L3 117 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Rs1Q9Z1L4 224 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Spink1P09036 80 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Trav9-1A0A075B601 112 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ighv1-69A0A0G2JFS5 117 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Klk1b4P00757 256 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 CckP09240 115 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Tex26Q0VB26 296 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 5730522E02RikQ5SP45 163 aa12.64□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Insl3O09107 122 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Tusc5Q8C838 173 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ly86O88188 162 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 P01790 122 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 8030423J24RikQ9CX45 142 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Asxl3Q8C4A5 2259 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ighv1-80A0A075B5Y3 117 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Cela2aP05208 271 aa12.63□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Wt1P22561 449 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 VsirQ9D659 308 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Klf13Q9JJZ6 289 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 P03980 138 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Minos1Q7TNS2 76 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Tctex1d4Q8CDY7 219 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Scn2aA0A0J9YTW6 2006 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm5105Q8C6Y9 112 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ighv1-9A0A0A6YW37 117 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Tpsab1Q02844 273 aa12.62□□□□□ -0.39
Clcn3-203ENSMUST00000093490 3110021N24RikJ3QMN2 152 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Pla2g2aP31482 146 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Loxl1P97873 607 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Q8C708 225 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Tomm7Q9D173 55 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm11020F6ZGD5 61 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Trav7-2Q5R1I3 112 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Pom121l2Q5SW25 972 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Pygo2Q80V76 405 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ighv1-55A0A075B5W6 117 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Igkv4-70A0A0B4J1I5 116 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Fancd2osQ9D4K4 178 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms