RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 Q6ZQT0 140 aa3.54□□□□□ -1.84
CHD2-227ENST00000637572 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
CHD2-227ENST00000637572 TMEM258P61165 79 aa3.54□□□□□ -1.84
CHD2-227ENST00000637572 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
CHD2-227ENST00000637572 IGLV7-43P04211 117 aa3.53□□□□□ -1.84
CHD2-227ENST00000637572 WFDC13Q8IUB5 93 aa3.53□□□□□ -1.84
CHD2-227ENST00000637572 A0A1W2PNN7 141 aa3.53□□□□□ -1.84
CHD2-227ENST00000637572 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
CHD2-227ENST00000637572 SMR3BP02814 79 aaPredicted RBP3.53□□□□□ -1.84
CHD2-227ENST00000637572 ATP5EP56381 51 aaPredicted RBP3.53□□□□□ -1.84
CHD2-227ENST00000637572 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
CHD2-227ENST00000637572 TRAV7A0A075B6U4 112 aa3.53□□□□□ -1.84
CHD2-227ENST00000637572 CASC2Q6XLA1 102 aa3.53□□□□□ -1.84
CHD2-227ENST00000637572 HRNRQ86YZ3 2850 aaPredicted RBP3.53□□□□□ -1.84
CHD2-227ENST00000637572 TRBV7-7A0A0K0K1E9 115 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 ST20-AS1Q8NBB2 130 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 SPACA4Q8TDM5 124 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 TP53AIP1Q9HCN2 124 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 PLAC8Q9NZF1 115 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 PSORS1C2Q9UIG4 136 aa3.52□□□□□ -1.85
CHD2-227ENST00000637572 HCG22E2RYF7 251 aa3.51□□□□□ -1.85
CHD2-227ENST00000637572 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
CHD2-227ENST00000637572 COX7CP15954 63 aa3.51□□□□□ -1.85
CHD2-227ENST00000637572 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 Q6ZR54 194 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 SPRR4Q96PI1 79 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 SVEP1Q4LDE5 3571 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 Q8N377 158 aa3.5□□□□□ -1.85
CHD2-227ENST00000637572 SPRR1AP35321 89 aa3.49□□□□□ -1.85
CHD2-227ENST00000637572 ZNF469Q96JG9 3925 aaPredicted RBP3.48□□□□□ -1.85
CHD2-227ENST00000637572 IGLV5-48A0A075B6I7 105 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 KRTAP1-5Q9BYS1 174 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 FAM229BQ4G0N7 80 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 CD164Q04900 197 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 LINC00304Q8N9R0 145 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 Q8N9L7 120 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 MPLKIPQ8TAP9 179 aa3.48□□□□□ -1.85
CHD2-227ENST00000637572 H3BPC8 53 aa3.47□□□□□ -1.85
CHD2-227ENST00000637572 COL7A1Q02388 2944 aa3.47□□□□□ -1.85
CHD2-227ENST00000637572 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
CHD2-227ENST00000637572 A8MWP4 228 aa3.47□□□□□ -1.85
CHD2-227ENST00000637572 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
CHD2-227ENST00000637572 FAM236DA0A1B0GTK5 79 aa3.46□□□□□ -1.85
CHD2-227ENST00000637572 SPINK1P00995 79 aa3.46□□□□□ -1.85
CHD2-227ENST00000637572 FAM236CP0DP71 79 aa3.46□□□□□ -1.85
CHD2-227ENST00000637572 LINC00313P59037 77 aa3.46□□□□□ -1.86
CHD2-227ENST00000637572 A0A087WVE0 104 aa3.46□□□□□ -1.86
CHD2-227ENST00000637572 LINC00208Q96KT6 92 aa3.45□□□□□ -1.86
CHD2-227ENST00000637572 OBSCN-AS1Q96MR7 158 aa3.45□□□□□ -1.86
CHD2-227ENST00000637572 KRTAP3-1Q9BYR8 98 aa3.45□□□□□ -1.86
CHD2-227ENST00000637572 MEGF8Q7Z7M0 2845 aa3.45□□□□□ -1.86
CHD2-227ENST00000637572 DEFB116Q30KQ4 102 aa3.45□□□□□ -1.86
CHD2-227ENST00000637572 ERC2-IT1O76042 136 aa3.44□□□□□ -1.86
CHD2-227ENST00000637572 SPRR1BP22528 89 aa3.44□□□□□ -1.86
CHD2-227ENST00000637572 H0Y9P7 68 aa3.44□□□□□ -1.86
CHD2-227ENST00000637572 V9GYY9 64 aa3.44□□□□□ -1.86
CHD2-227ENST00000637572 AKAP9Q99996 3911 aa3.44□□□□□ -1.86
CHD2-227ENST00000637572 TMEM254Q8TBM7 123 aa3.43□□□□□ -1.86
CHD2-227ENST00000637572 PRR15Q8IV56 129 aa3.42□□□□□ -1.86
CHD2-227ENST00000637572 Q6ZRN7 208 aaPredicted RBP3.42□□□□□ -1.86
CHD2-227ENST00000637572 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
CHD2-227ENST00000637572 SNURFQ9Y675 71 aa3.42□□□□□ -1.86
CHD2-227ENST00000637572 MRPL34Q9BQ48 92 aaKnown RBP3.42□□□□□ -1.86
CHD2-227ENST00000637572 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
CHD2-227ENST00000637572 CUBNO60494 3623 aa3.42□□□□□ -1.86
CHD2-227ENST00000637572 IGLV8-61A0A075B6I0 122 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 A0A1B0GVX0 72 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 A0A1W2PNM2 257 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 TRAV22A0A0B4J277 110 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 Q8N1X5 172 aa3.41□□□□□ -1.86
CHD2-227ENST00000637572 LOC101927531A0A1B0GV80 90 aa3.4□□□□□ -1.86
CHD2-227ENST00000637572 ATP11AUNQ6ZP68 121 aa3.4□□□□□ -1.86
CHD2-227ENST00000637572 Q5VSD8 79 aa3.4□□□□□ -1.87
CHD2-227ENST00000637572 Q8NDZ9 215 aa3.4□□□□□ -1.87
CHD2-227ENST00000637572 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
CHD2-227ENST00000637572 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
CHD2-227ENST00000637572 K7EQZ3 153 aa3.39□□□□□ -1.87
CHD2-227ENST00000637572 Q96NJ1 140 aa3.39□□□□□ -1.87
CHD2-227ENST00000637572 CCDC179H3BU77 68 aa3.38□□□□□ -1.87
CHD2-227ENST00000637572 KRTAP10-2P60368 255 aa3.38□□□□□ -1.87
CHD2-227ENST00000637572 PRR4Q16378 134 aa3.38□□□□□ -1.87
CHD2-227ENST00000637572 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
CHD2-227ENST00000637572 A0A0U1RQV1 116 aa3.38□□□□□ -1.87
CHD2-227ENST00000637572 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
CHD2-227ENST00000637572 LINC00483Q53H64 154 aa3.37□□□□□ -1.87
CHD2-227ENST00000637572 ANAPC11Q9NYG5 84 aa3.37□□□□□ -1.87
CHD2-227ENST00000637572 IGKV2D-30A0A075B6S6 120 aa3.37□□□□□ -1.87
CHD2-227ENST00000637572 IGKV2-30P06310 120 aa3.37□□□□□ -1.87
CHD2-227ENST00000637572 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
CHD2-227ENST00000637572 SMIM26A0A096LP01 95 aa3.35□□□□□ -1.87
CHD2-227ENST00000637572 ACYP2P14621 99 aa3.35□□□□□ -1.87
CHD2-227ENST00000637572 RETNLBQ9BQ08 111 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms