RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TMEM167BQ9NRX6 74 aa0.33□□□□□ -2.36
SMARCB1-209ENST00000635578 CACFD1Q9UGQ2 172 aa0.33□□□□□ -2.36
SMARCB1-209ENST00000635578 ERG28Q9UKR5 140 aa0.33□□□□□ -2.36
SMARCB1-209ENST00000635578 LENEPQ9Y5L5 61 aa0.33□□□□□ -2.36
SMARCB1-209ENST00000635578 V9GYV3 84 aa0.33□□□□□ -2.36
SMARCB1-209ENST00000635578 TRAV23DV6A0A075B6W5 121 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 BORCS7-ASMTA0A0B4J1R7 106 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 TRBV6-5A0A0K0K1A5 114 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 TRBV30A0A0K0K1B3 111 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 TRBV27A0A0K0K1C4 114 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 A0A1B0GUT8 65 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 KANTRA0A1W2PQU2 76 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 C20orf202A1L168 122 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 A8MUN3 132 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 F8VRH5 84 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 NUPR1O60356 82 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 NMBP08949 121 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 SRP19P09132 144 aaKnown RBP0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 SPRR2DP22532 72 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 S100A7P31151 101 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 CKS2P33552 79 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 POLR2KP53803 58 aaKnown RBP0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 CKS1BP61024 79 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 TMEM97Q5BJF2 176 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 SAPCD1Q5SSQ6 148 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 TMEM170BQ5T4T1 132 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 SCGB1D4Q6XE38 83 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 Q6ZRX8 168 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 KTN1-AS1Q86SY8 53 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 WFDC13Q8IUB5 93 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 BOD1L2Q8IYS8 172 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 Q8IZM0 81 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 C9orf62Q8N4C0 152 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 DEFB105AQ8NG35 78 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 PTH2Q96A98 100 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 BORCS7Q96B45 105 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 PRELID3AQ96N28 172 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 C2orf88Q9BSF0 95 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 GGACTQ9BVM4 153 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 CNFNQ9BYD5 112 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 MAP1LC3AQ9H492 121 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 MANBALQ9NQG1 85 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 CYSLTR1Q9Y271 337 aa0.32□□□□□ -2.36
SMARCB1-209ENST00000635578 A0A087WVE0 104 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 IGIPA6NJ69 53 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 A6NN06 94 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 HMSDA8MTL9 139 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 C1orf196B1AJZ1 125 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 K7EP13 123 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 PPP1R17O96001 155 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 PPBPP02775 128 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 S100A9P06702 114 aaKnown RBP0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 DDTP30046 118 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 SPRR1AP35321 89 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 MT4P47944 62 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 LINC00158P58513 81 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 RPS20P60866 119 aaKnown RBP0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 PKIAP61925 76 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 HERVK_113P63121 156 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 SMAGPQ0VAQ4 97 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 ZNF345Q14585 488 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 C1orf195Q5TG92 126 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 SFTA2Q6UW10 78 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 FP248Q71RG6 208 aaPredicted RBP0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 S100A7AQ86SG5 101 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 ATOH7Q8N100 152 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 Q8N8P6 123 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 C18orf32Q8TCD1 76 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 MBD3L1Q8WWY6 194 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 S100ZQ8WXG8 99 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 Q96NJ1 140 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 AMELXQ99217 191 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 NKX6-2Q9C056 277 aaPredicted RBP0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 OSTCQ9NRP0 149 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 SPANXA1Q9NS26 97 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 PRO2289Q9P1D8 64 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 NDUFA12Q9UI09 145 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 ZFP30Q9Y2G7 519 aa0.31□□□□□ -2.36
SMARCB1-209ENST00000635578 A0A087WSZ3 146 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 FAM236AA0A1B0GUQ0 79 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 FAM236BA0A1B0GV22 79 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 SMIM27A0A1W2PRY6 76 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 K7EP34 96 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 HBDP02042 147 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 LINC00614P0C842 121 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 IGLC3P0DOY3 106 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 FABP4P15090 132 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 COX7BP24311 80 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 MRPS36P82909 103 aaKnown RBP0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 SERF2P84101 59 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 Q6ZQY7 126 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 C7orf65Q6ZTY9 151 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 SMIM15Q7Z3B0 74 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 OR13C6PQ8NH95 151 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 TOMM6Q96B49 74 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 SCGB3A1Q96QR1 104 aa0.3□□□□□ -2.36
SMARCB1-209ENST00000635578 VPS25Q9BRG1 176 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms