RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
MSH6-215ENST00000622629 OTOGQ6ZRI0 2925 aa8.32□□□□□ -1.08
MSH6-215ENST00000622629 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
MSH6-215ENST00000622629 A0A1B0GW54 56 aa8.32□□□□□ -1.08
MSH6-215ENST00000622629 PDZD2O15018 2839 aa8.31□□□□□ -1.08
MSH6-215ENST00000622629 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
MSH6-215ENST00000622629 ZFHX3Q15911 3703 aa8.3□□□□□ -1.08
MSH6-215ENST00000622629 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
MSH6-215ENST00000622629 TLX1NBP0CAT3 122 aa8.3□□□□□ -1.08
MSH6-215ENST00000622629 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
MSH6-215ENST00000622629 H7BZZ5 65 aa8.29□□□□□ -1.08
MSH6-215ENST00000622629 KLKP1Q107X0 134 aa8.28□□□□□ -1.08
MSH6-215ENST00000622629 IGFL1Q6UW32 110 aa8.28□□□□□ -1.08
MSH6-215ENST00000622629 MOBPQ13875 183 aa8.27□□□□□ -1.09
MSH6-215ENST00000622629 C1orf134Q5TEV5 83 aa8.26□□□□□ -1.09
MSH6-215ENST00000622629 C1orf64Q8NEQ6 169 aa8.26□□□□□ -1.09
MSH6-215ENST00000622629 STAB2Q8WWQ8 2551 aa8.25□□□□□ -1.09
MSH6-215ENST00000622629 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
MSH6-215ENST00000622629 IGLV5-48A0A075B6I7 105 aa8.23□□□□□ -1.09
MSH6-215ENST00000622629 KTN1-AS1Q86SY8 53 aa8.22□□□□□ -1.09
MSH6-215ENST00000622629 hDV103S1A0JD37 113 aa8.21□□□□□ -1.09
MSH6-215ENST00000622629 PRR15LQ9BU68 103 aa8.21□□□□□ -1.09
MSH6-215ENST00000622629 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
MSH6-215ENST00000622629 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
MSH6-215ENST00000622629 RTL8CO15255 209 aa8.19□□□□□ -1.1
MSH6-215ENST00000622629 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
MSH6-215ENST00000622629 OXTP01178 125 aa8.17□□□□□ -1.1
MSH6-215ENST00000622629 TENM1Q9UKZ4 2725 aa8.16□□□□□ -1.1
MSH6-215ENST00000622629 VWFP04275 2813 aa8.16□□□□□ -1.1
MSH6-215ENST00000622629 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
MSH6-215ENST00000622629 A0A0A0MQY5 61 aa8.15□□□□□ -1.1
MSH6-215ENST00000622629 LCA10Q71F78 164 aa8.15□□□□□ -1.1
MSH6-215ENST00000622629 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
MSH6-215ENST00000622629 A8MWP4 228 aa8.15□□□□□ -1.1
MSH6-215ENST00000622629 CNBPP62633 177 aaKnown RBP8.14□□□□□ -1.11
MSH6-215ENST00000622629 APLNQ9ULZ1 77 aa8.14□□□□□ -1.11
MSH6-215ENST00000622629 ANAPC11Q9NYG5 84 aa8.14□□□□□ -1.11
MSH6-215ENST00000622629 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
MSH6-215ENST00000622629 PRR15Q8IV56 129 aa8.13□□□□□ -1.11
MSH6-215ENST00000622629 DSCR10P59022 87 aa8.11□□□□□ -1.11
MSH6-215ENST00000622629 Q5XG85 94 aa8.11□□□□□ -1.11
MSH6-215ENST00000622629 TENM3Q9P273 2699 aa8.1□□□□□ -1.11
MSH6-215ENST00000622629 SPRR1AP35321 89 aa8.1□□□□□ -1.11
MSH6-215ENST00000622629 A0A087WTM6 91 aa8.09□□□□□ -1.11
MSH6-215ENST00000622629 SPRR4Q96PI1 79 aa8.09□□□□□ -1.11
MSH6-215ENST00000622629 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
MSH6-215ENST00000622629 TP53AIP1Q9HCN2 124 aa8.09□□□□□ -1.11
MSH6-215ENST00000622629 C8orf87E5RJ46 101 aa8.06□□□□□ -1.12
MSH6-215ENST00000622629 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
MSH6-215ENST00000622629 H3BPC8 53 aa8.06□□□□□ -1.12
MSH6-215ENST00000622629 WWC2-AS2Q96NR7 200 aa8.05□□□□□ -1.12
MSH6-215ENST00000622629 PSORS1C2Q9UIG4 136 aa8.05□□□□□ -1.12
MSH6-215ENST00000622629 C7orf65Q6ZTY9 151 aa8.05□□□□□ -1.12
MSH6-215ENST00000622629 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
MSH6-215ENST00000622629 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
MSH6-215ENST00000622629 A8MUN3 132 aa8.03□□□□□ -1.12
MSH6-215ENST00000622629 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
MSH6-215ENST00000622629 ZNF861PO60384 105 aa8.03□□□□□ -1.12
MSH6-215ENST00000622629 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
MSH6-215ENST00000622629 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
MSH6-215ENST00000622629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
MSH6-215ENST00000622629 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
MSH6-215ENST00000622629 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
MSH6-215ENST00000622629 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
MSH6-215ENST00000622629 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
MSH6-215ENST00000622629 SPINK1P00995 79 aa7.99□□□□□ -1.13
MSH6-215ENST00000622629 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
MSH6-215ENST00000622629 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
MSH6-215ENST00000622629 LINC00313P59037 77 aa7.96□□□□□ -1.13
MSH6-215ENST00000622629 COA5Q86WW8 74 aa7.96□□□□□ -1.14
MSH6-215ENST00000622629 TNP2Q05952 138 aa7.96□□□□□ -1.14
MSH6-215ENST00000622629 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
MSH6-215ENST00000622629 FP248Q71RG6 208 aaPredicted RBP7.95□□□□□ -1.14
MSH6-215ENST00000622629 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
MSH6-215ENST00000622629 FAM229BQ4G0N7 80 aa7.93□□□□□ -1.14
MSH6-215ENST00000622629 K7ERS5 55 aa7.93□□□□□ -1.14
MSH6-215ENST00000622629 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
MSH6-215ENST00000622629 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
MSH6-215ENST00000622629 ACYP2P14621 99 aa7.91□□□□□ -1.14
MSH6-215ENST00000622629 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
MSH6-215ENST00000622629 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
MSH6-215ENST00000622629 PKD1L1Q8TDX9 2849 aa7.9□□□□□ -1.14
MSH6-215ENST00000622629 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.15
MSH6-215ENST00000622629 PANO1I0J062 215 aa7.89□□□□□ -1.15
MSH6-215ENST00000622629 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
MSH6-215ENST00000622629 SSBP3-AS1Q7Z2R9 100 aa7.89□□□□□ -1.15
MSH6-215ENST00000622629 IGLV8-61A0A075B6I0 122 aa7.87□□□□□ -1.15
MSH6-215ENST00000622629 ZNF469Q96JG9 3925 aaPredicted RBP7.87□□□□□ -1.15
MSH6-215ENST00000622629 LINC00472Q9H8W2 130 aa7.86□□□□□ -1.15
MSH6-215ENST00000622629 SPRR1BP22528 89 aa7.86□□□□□ -1.15
MSH6-215ENST00000622629 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
MSH6-215ENST00000622629 MMP24-AS1A0A0U1RRL7 71 aa7.84□□□□□ -1.15
MSH6-215ENST00000622629 KRTAP11-1Q8IUC1 163 aa7.84□□□□□ -1.15
MSH6-215ENST00000622629 A0A1B0GU69 56 aa7.84□□□□□ -1.15
MSH6-215ENST00000622629 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
MSH6-215ENST00000622629 Q96NJ1 140 aa7.84□□□□□ -1.15
MSH6-215ENST00000622629 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
MSH6-215ENST00000622629 ANK3Q12955 4377 aaKnown RBP7.83□□□□□ -1.16
MSH6-215ENST00000622629 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
MSH6-215ENST00000622629 CYP4F30PQ9H0H9 118 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms