RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 A0A1W2PNM2 257 aa5.17□□□□□ -1.58
VPS11-209ENST00000622309 C1orf137Q5JT78 98 aa5.17□□□□□ -1.58
VPS11-209ENST00000622309 IGLV5-48A0A075B6I7 105 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 DEFB130BP0DP73 79 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 DEFB130AP0DP74 79 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 H3BPC8 53 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 KRTAP24-1Q3LI83 254 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 Q8NBF4 154 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 C1orf134Q5TEV5 83 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 Q8N377 158 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 SPINK7P58062 85 aa5.14□□□□□ -1.59
VPS11-209ENST00000622309 CMC4P56277 68 aaPredicted RBP5.13□□□□□ -1.59
VPS11-209ENST00000622309 C6orf48Q9UBA6 75 aa5.13□□□□□ -1.59
VPS11-209ENST00000622309 GVQW2A0A096LPI5 108 aaPredicted RBP5.12□□□□□ -1.59
VPS11-209ENST00000622309 ANK3Q12955 4377 aaKnown RBP5.12□□□□□ -1.59
VPS11-209ENST00000622309 IGKV2D-24A0A075B6R9 120 aa5.12□□□□□ -1.59
VPS11-209ENST00000622309 C4orf3Q8WVX3 66 aa5.11□□□□□ -1.59
VPS11-209ENST00000622309 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
VPS11-209ENST00000622309 VWFP04275 2813 aa5.11□□□□□ -1.59
VPS11-209ENST00000622309 PRO0255Q9UI72 69 aa5.1□□□□□ -1.59
VPS11-209ENST00000622309 C9orf163Q8N9P6 203 aa5.1□□□□□ -1.59
VPS11-209ENST00000622309 CAMK2N2Q96S95 79 aa5.1□□□□□ -1.59
VPS11-209ENST00000622309 IGLV7-46A0A075B6I9 117 aa5.09□□□□□ -1.59
VPS11-209ENST00000622309 Q8NAQ8 132 aa5.09□□□□□ -1.59
VPS11-209ENST00000622309 C7orf33Q8WU49 177 aa5.09□□□□□ -1.59
VPS11-209ENST00000622309 DEFB4AO15263 64 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 GIG44P09565 113 aaPredicted RBP5.08□□□□□ -1.6
VPS11-209ENST00000622309 DHRS4-AS1Q9P1J3 65 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 ANK2Q01484 3957 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 CSNK1G2-AS1Q8NCQ2 148 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 TRRAPQ9Y4A5 3859 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 HTN3P15516 51 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 TENM1Q9UKZ4 2725 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
VPS11-209ENST00000622309 EGFEM1PQ0D2K5 195 aa5.06□□□□□ -1.6
VPS11-209ENST00000622309 CSAG1Q6PB30 78 aa5.06□□□□□ -1.6
VPS11-209ENST00000622309 RPL37AP61513 92 aaKnown RBP5.05□□□□□ -1.6
VPS11-209ENST00000622309 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
VPS11-209ENST00000622309 ASB16-AS1Q495Z4 193 aa5.04□□□□□ -1.6
VPS11-209ENST00000622309 IGLV1-51P01701 117 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 A0A087WSZ3 146 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 IGLV9-49A0A0B4J1Y8 123 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 Q6ZRX8 168 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 IGLV1-50A0A075B6I6 118 aa5.02□□□□□ -1.61
VPS11-209ENST00000622309 KRTAP10-3P60369 221 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 A0A0G2JQZ4 141 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 A0A1W2PNN7 141 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 MEGF8Q7Z7M0 2845 aa5□□□□□ -1.61
VPS11-209ENST00000622309 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
VPS11-209ENST00000622309 DEFB135Q30KP9 77 aa5□□□□□ -1.61
VPS11-209ENST00000622309 PRR34Q9NV39 138 aa5□□□□□ -1.61
VPS11-209ENST00000622309 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 HRES1P13985 223 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 LELP1Q5T871 98 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 IGFL1Q6UW32 110 aa4.98□□□□□ -1.61
VPS11-209ENST00000622309 RTL8CO15255 209 aa4.98□□□□□ -1.61
VPS11-209ENST00000622309 A0A087X002 238 aa4.97□□□□□ -1.61
VPS11-209ENST00000622309 A8MWP4 228 aa4.97□□□□□ -1.61
VPS11-209ENST00000622309 ROMO1P60602 79 aa4.96□□□□□ -1.62
VPS11-209ENST00000622309 Q6ZR54 194 aa4.96□□□□□ -1.62
VPS11-209ENST00000622309 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
VPS11-209ENST00000622309 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
VPS11-209ENST00000622309 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
VPS11-209ENST00000622309 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
VPS11-209ENST00000622309 KRTAP4-16G5E9R7 235 aaPredicted RBP4.93□□□□□ -1.62
VPS11-209ENST00000622309 FAM229AH3BQW9 127 aa4.93□□□□□ -1.62
VPS11-209ENST00000622309 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 SPRR1AP35321 89 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 PKD1L1Q8TDX9 2849 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 A0A1B0GU69 56 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 TGP01266 2768 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 P0C880 135 aa4.9□□□□□ -1.63
VPS11-209ENST00000622309 FAM168BA1KXE4 195 aa4.9□□□□□ -1.63
VPS11-209ENST00000622309 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
VPS11-209ENST00000622309 CHTF8P0CG12 524 aa4.89□□□□□ -1.63
VPS11-209ENST00000622309 LINC00472Q9H8W2 130 aa4.88□□□□□ -1.63
VPS11-209ENST00000622309 UQCR11O14957 56 aa4.88□□□□□ -1.63
VPS11-209ENST00000622309 ACYP2P14621 99 aa4.88□□□□□ -1.63
VPS11-209ENST00000622309 IGLV8-61A0A075B6I0 122 aa4.87□□□□□ -1.63
VPS11-209ENST00000622309 KRTAP26-1Q6PEX3 210 aa4.87□□□□□ -1.63
VPS11-209ENST00000622309 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
VPS11-209ENST00000622309 TENM3Q9P273 2699 aa4.84□□□□□ -1.63
VPS11-209ENST00000622309 PRLHP81277 87 aa4.84□□□□□ -1.63
VPS11-209ENST00000622309 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.64
VPS11-209ENST00000622309 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
VPS11-209ENST00000622309 A0A096LNI7 61 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms