RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 Q96NJ1 140 aa8.1□□□□□ -1.11
TNFAIP3-206ENST00000612899 ZNF861PO60384 105 aa8.1□□□□□ -1.11
TNFAIP3-206ENST00000612899 MRPL34Q9BQ48 92 aaKnown RBP8.1□□□□□ -1.11
TNFAIP3-206ENST00000612899 BAHCC1Q9P281 2608 aa8.09□□□□□ -1.11
TNFAIP3-206ENST00000612899 KALRNO60229 2985 aa8.08□□□□□ -1.12
TNFAIP3-206ENST00000612899 BOD1L1Q8NFC6 3051 aa8.07□□□□□ -1.12
TNFAIP3-206ENST00000612899 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
TNFAIP3-206ENST00000612899 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
TNFAIP3-206ENST00000612899 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
TNFAIP3-206ENST00000612899 DNAH14Q0VDD8 3507 aa8.07□□□□□ -1.12
TNFAIP3-206ENST00000612899 COL12A1Q99715 3063 aa8.07□□□□□ -1.12
TNFAIP3-206ENST00000612899 APLNQ9ULZ1 77 aa8.06□□□□□ -1.12
TNFAIP3-206ENST00000612899 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
TNFAIP3-206ENST00000612899 UQCR11O14957 56 aa8.05□□□□□ -1.12
TNFAIP3-206ENST00000612899 REV3LO60673 3130 aa8.05□□□□□ -1.12
TNFAIP3-206ENST00000612899 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
TNFAIP3-206ENST00000612899 ADGRG4Q8IZF6 3080 aa8.05□□□□□ -1.12
TNFAIP3-206ENST00000612899 A0A1W2PNM2 257 aa8.05□□□□□ -1.12
TNFAIP3-206ENST00000612899 IGLV8-61A0A075B6I0 122 aa8.04□□□□□ -1.12
TNFAIP3-206ENST00000612899 Q75L30 129 aa8.04□□□□□ -1.12
TNFAIP3-206ENST00000612899 C8orf17Q9NRJ1 99 aa8.04□□□□□ -1.12
TNFAIP3-206ENST00000612899 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
TNFAIP3-206ENST00000612899 SMR3BP02814 79 aaPredicted RBP8.03□□□□□ -1.12
TNFAIP3-206ENST00000612899 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
TNFAIP3-206ENST00000612899 DSCR10P59022 87 aa8.03□□□□□ -1.12
TNFAIP3-206ENST00000612899 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
TNFAIP3-206ENST00000612899 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
TNFAIP3-206ENST00000612899 STAB2Q8WWQ8 2551 aa8.01□□□□□ -1.13
TNFAIP3-206ENST00000612899 OCR1Q9BZK8 76 aa8□□□□□ -1.13
TNFAIP3-206ENST00000612899 A0A1B0GVX0 72 aa8□□□□□ -1.13
TNFAIP3-206ENST00000612899 SPEGQ15772 3267 aa7.99□□□□□ -1.13
TNFAIP3-206ENST00000612899 TNRC18O15417 2968 aaPredicted RBP7.99□□□□□ -1.13
TNFAIP3-206ENST00000612899 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
TNFAIP3-206ENST00000612899 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
TNFAIP3-206ENST00000612899 SPRR4Q96PI1 79 aa7.98□□□□□ -1.13
TNFAIP3-206ENST00000612899 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
TNFAIP3-206ENST00000612899 IGLV5-48A0A075B6I7 105 aa7.96□□□□□ -1.14
TNFAIP3-206ENST00000612899 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.14
TNFAIP3-206ENST00000612899 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
TNFAIP3-206ENST00000612899 ZZEF1O43149 2961 aa7.93□□□□□ -1.14
TNFAIP3-206ENST00000612899 Q5VV11 94 aa7.93□□□□□ -1.14
TNFAIP3-206ENST00000612899 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
TNFAIP3-206ENST00000612899 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
TNFAIP3-206ENST00000612899 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
TNFAIP3-206ENST00000612899 CFAP47Q6ZTR5 3102 aa7.91□□□□□ -1.14
TNFAIP3-206ENST00000612899 TNP2Q05952 138 aa7.91□□□□□ -1.14
TNFAIP3-206ENST00000612899 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
TNFAIP3-206ENST00000612899 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.14
TNFAIP3-206ENST00000612899 Q8NDZ9 215 aa7.89□□□□□ -1.15
TNFAIP3-206ENST00000612899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
TNFAIP3-206ENST00000612899 J3QL48 77 aa7.87□□□□□ -1.15
TNFAIP3-206ENST00000612899 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
TNFAIP3-206ENST00000612899 LRBAP50851 2863 aa7.86□□□□□ -1.15
TNFAIP3-206ENST00000612899 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
TNFAIP3-206ENST00000612899 UTP20O75691 2785 aaKnown RBP7.86□□□□□ -1.15
TNFAIP3-206ENST00000612899 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
TNFAIP3-206ENST00000612899 CELSR2Q9HCU4 2923 aa7.81□□□□□ -1.16
TNFAIP3-206ENST00000612899 DMXL1Q9Y485 3027 aa7.8□□□□□ -1.16
TNFAIP3-206ENST00000612899 HIVEP1P15822 2718 aa7.8□□□□□ -1.16
TNFAIP3-206ENST00000612899 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.16
TNFAIP3-206ENST00000612899 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
TNFAIP3-206ENST00000612899 Q8N1X5 172 aa7.77□□□□□ -1.17
TNFAIP3-206ENST00000612899 ZANQ9Y493 2812 aa7.76□□□□□ -1.17
TNFAIP3-206ENST00000612899 SPRR1AP35321 89 aa7.76□□□□□ -1.17
TNFAIP3-206ENST00000612899 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
TNFAIP3-206ENST00000612899 KRTAP1-5Q9BYS1 174 aa7.76□□□□□ -1.17
TNFAIP3-206ENST00000612899 KMT2BQ9UMN6 2715 aaPredicted RBP7.75□□□□□ -1.17
TNFAIP3-206ENST00000612899 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
TNFAIP3-206ENST00000612899 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
TNFAIP3-206ENST00000612899 MYO15AQ9UKN7 3530 aa7.73□□□□□ -1.17
TNFAIP3-206ENST00000612899 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
TNFAIP3-206ENST00000612899 A6NN06 94 aa7.73□□□□□ -1.17
TNFAIP3-206ENST00000612899 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
TNFAIP3-206ENST00000612899 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
TNFAIP3-206ENST00000612899 TENM4Q6N022 2769 aa7.7□□□□□ -1.18
TNFAIP3-206ENST00000612899 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
TNFAIP3-206ENST00000612899 CRYBG3Q68DQ2 2970 aa7.68□□□□□ -1.18
TNFAIP3-206ENST00000612899 DCHS2Q6V1P9 2916 aa7.68□□□□□ -1.18
TNFAIP3-206ENST00000612899 APCP25054 2843 aa7.68□□□□□ -1.18
TNFAIP3-206ENST00000612899 SPINK7P58062 85 aa7.66□□□□□ -1.18
TNFAIP3-206ENST00000612899 LOC400499M0QZD8 3231 aa7.66□□□□□ -1.18
TNFAIP3-206ENST00000612899 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
TNFAIP3-206ENST00000612899 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.19
TNFAIP3-206ENST00000612899 MUC3AQ02505 3323 aa7.63□□□□□ -1.19
TNFAIP3-206ENST00000612899 SPRR1BP22528 89 aa7.62□□□□□ -1.19
TNFAIP3-206ENST00000612899 HRES1P13985 223 aa7.62□□□□□ -1.19
TNFAIP3-206ENST00000612899 LINC00472Q9H8W2 130 aa7.6□□□□□ -1.19
TNFAIP3-206ENST00000612899 A0A0D9SG42 100 aa7.6□□□□□ -1.19
TNFAIP3-206ENST00000612899 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
TNFAIP3-206ENST00000612899 NF1P21359 2839 aa7.6□□□□□ -1.19
TNFAIP3-206ENST00000612899 USP34Q70CQ2 3546 aa7.57□□□□□ -1.2
TNFAIP3-206ENST00000612899 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
TNFAIP3-206ENST00000612899 PANO1I0J062 215 aa7.54□□□□□ -1.2
TNFAIP3-206ENST00000612899 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
TNFAIP3-206ENST00000612899 FBN2P35556 2912 aa7.54□□□□□ -1.2
TNFAIP3-206ENST00000612899 Q6ZSA8 131 aa7.54□□□□□ -1.2
TNFAIP3-206ENST00000612899 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
TNFAIP3-206ENST00000612899 A0A087X002 238 aa7.52□□□□□ -1.21
TNFAIP3-206ENST00000612899 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
TNFAIP3-206ENST00000612899 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 420 ms