RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
TCF3-220ENST00000611869 SPTSSBQ8NFR3 76 aa8.37□□□□□ -1.07
TCF3-220ENST00000611869 ANAPC11Q9NYG5 84 aa8.37□□□□□ -1.07
TCF3-220ENST00000611869 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
TCF3-220ENST00000611869 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
TCF3-220ENST00000611869 IGLV5-48A0A075B6I7 105 aa8.35□□□□□ -1.07
TCF3-220ENST00000611869 V9GYY9 64 aa8.35□□□□□ -1.07
TCF3-220ENST00000611869 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
TCF3-220ENST00000611869 A8MWP4 228 aa8.33□□□□□ -1.08
TCF3-220ENST00000611869 PSPHP1O15172 72 aa8.33□□□□□ -1.08
TCF3-220ENST00000611869 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
TCF3-220ENST00000611869 RPS28P62857 69 aaKnown RBP8.32□□□□□ -1.08
TCF3-220ENST00000611869 ZNF861PO60384 105 aa8.31□□□□□ -1.08
TCF3-220ENST00000611869 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
TCF3-220ENST00000611869 A6NED7 52 aa8.3□□□□□ -1.08
TCF3-220ENST00000611869 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
TCF3-220ENST00000611869 TRAV22A0A0B4J277 110 aa8.3□□□□□ -1.08
TCF3-220ENST00000611869 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
TCF3-220ENST00000611869 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
TCF3-220ENST00000611869 PRR15Q8IV56 129 aa8.28□□□□□ -1.08
TCF3-220ENST00000611869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
TCF3-220ENST00000611869 SEC61GP60059 68 aa8.28□□□□□ -1.08
TCF3-220ENST00000611869 TP53AIP1Q9HCN2 124 aa8.28□□□□□ -1.08
TCF3-220ENST00000611869 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
TCF3-220ENST00000611869 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
TCF3-220ENST00000611869 IGKV2D-30A0A075B6S6 120 aa8.26□□□□□ -1.09
TCF3-220ENST00000611869 H7BZZ5 65 aa8.26□□□□□ -1.09
TCF3-220ENST00000611869 IGKV2-30P06310 120 aa8.26□□□□□ -1.09
TCF3-220ENST00000611869 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
TCF3-220ENST00000611869 SPRR1AP35321 89 aa8.25□□□□□ -1.09
TCF3-220ENST00000611869 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
TCF3-220ENST00000611869 C1orf195Q5TG92 126 aa8.24□□□□□ -1.09
TCF3-220ENST00000611869 TNP2Q05952 138 aa8.24□□□□□ -1.09
TCF3-220ENST00000611869 CUBNO60494 3623 aa8.24□□□□□ -1.09
TCF3-220ENST00000611869 TENM1Q9UKZ4 2725 aa8.23□□□□□ -1.09
TCF3-220ENST00000611869 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
TCF3-220ENST00000611869 IGLV7-43P04211 117 aa8.21□□□□□ -1.09
TCF3-220ENST00000611869 LINC00313P59037 77 aa8.21□□□□□ -1.09
TCF3-220ENST00000611869 H3BPC8 53 aa8.21□□□□□ -1.1
TCF3-220ENST00000611869 SPINK1P00995 79 aa8.2□□□□□ -1.1
TCF3-220ENST00000611869 DSCR10P59022 87 aa8.2□□□□□ -1.1
TCF3-220ENST00000611869 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
TCF3-220ENST00000611869 C8orf17Q9NRJ1 99 aa8.2□□□□□ -1.1
TCF3-220ENST00000611869 PDZD2O15018 2839 aa8.19□□□□□ -1.1
TCF3-220ENST00000611869 BSNQ9UPA5 3926 aa8.18□□□□□ -1.1
TCF3-220ENST00000611869 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
TCF3-220ENST00000611869 VWFP04275 2813 aa8.17□□□□□ -1.1
TCF3-220ENST00000611869 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
TCF3-220ENST00000611869 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
TCF3-220ENST00000611869 SSBP3-AS1Q7Z2R9 100 aa8.17□□□□□ -1.1
TCF3-220ENST00000611869 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
TCF3-220ENST00000611869 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
TCF3-220ENST00000611869 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
TCF3-220ENST00000611869 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
TCF3-220ENST00000611869 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
TCF3-220ENST00000611869 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
TCF3-220ENST00000611869 Q96NJ1 140 aa8.11□□□□□ -1.11
TCF3-220ENST00000611869 PRO0628Q9UI54 55 aa8.11□□□□□ -1.11
TCF3-220ENST00000611869 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
TCF3-220ENST00000611869 KRTAP4-16G5E9R7 235 aaPredicted RBP8.1□□□□□ -1.11
TCF3-220ENST00000611869 FBN1P35555 2871 aaKnown RBP8.09□□□□□ -1.11
TCF3-220ENST00000611869 PANO1I0J062 215 aa8.09□□□□□ -1.11
TCF3-220ENST00000611869 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.12
TCF3-220ENST00000611869 PMAIP1Q13794 54 aa8.09□□□□□ -1.12
TCF3-220ENST00000611869 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
TCF3-220ENST00000611869 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
TCF3-220ENST00000611869 ACYP2P14621 99 aa8.08□□□□□ -1.12
TCF3-220ENST00000611869 PLAC8Q9NZF1 115 aa8.06□□□□□ -1.12
TCF3-220ENST00000611869 COA5Q86WW8 74 aa8.05□□□□□ -1.12
TCF3-220ENST00000611869 SPRR1BP22528 89 aa8.04□□□□□ -1.12
TCF3-220ENST00000611869 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
TCF3-220ENST00000611869 A8MUN3 132 aa8.03□□□□□ -1.12
TCF3-220ENST00000611869 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
TCF3-220ENST00000611869 IGLV8-61A0A075B6I0 122 aa8.02□□□□□ -1.13
TCF3-220ENST00000611869 ZFHX3Q15911 3703 aa8.02□□□□□ -1.13
TCF3-220ENST00000611869 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
TCF3-220ENST00000611869 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
TCF3-220ENST00000611869 A0A1B0GU69 56 aa7.98□□□□□ -1.13
TCF3-220ENST00000611869 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
TCF3-220ENST00000611869 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
TCF3-220ENST00000611869 KRTAP10-2P60368 255 aa7.96□□□□□ -1.13
TCF3-220ENST00000611869 LINC00336Q6ZUF6 198 aa7.96□□□□□ -1.13
TCF3-220ENST00000611869 K7ERS5 55 aa7.95□□□□□ -1.14
TCF3-220ENST00000611869 Q6ZR54 194 aa7.94□□□□□ -1.14
TCF3-220ENST00000611869 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
TCF3-220ENST00000611869 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
TCF3-220ENST00000611869 CD164Q04900 197 aa7.92□□□□□ -1.14
TCF3-220ENST00000611869 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
TCF3-220ENST00000611869 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
TCF3-220ENST00000611869 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
TCF3-220ENST00000611869 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
TCF3-220ENST00000611869 DMBT1Q9UGM3 2413 aaPredicted RBP7.85□□□□□ -1.15
TCF3-220ENST00000611869 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
TCF3-220ENST00000611869 OXTP01178 125 aa7.85□□□□□ -1.15
TCF3-220ENST00000611869 CYP4F30PQ9H0H9 118 aa7.84□□□□□ -1.15
TCF3-220ENST00000611869 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
TCF3-220ENST00000611869 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
TCF3-220ENST00000611869 Q8N1X5 172 aa7.82□□□□□ -1.16
TCF3-220ENST00000611869 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
TCF3-220ENST00000611869 Q8N9P0 234 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms