RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
NEDD4L-227ENST00000590020 LITAFQ99732 161 aa6.2□□□□□ -1.42
NEDD4L-227ENST00000590020 HRES1P13985 223 aa6.19□□□□□ -1.42
NEDD4L-227ENST00000590020 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
NEDD4L-227ENST00000590020 RBM12B-AS1Q9P1G2 102 aa6.19□□□□□ -1.42
NEDD4L-227ENST00000590020 F8WEM9 126 aa6.18□□□□□ -1.42
NEDD4L-227ENST00000590020 PLNP26678 52 aa6.18□□□□□ -1.42
NEDD4L-227ENST00000590020 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
NEDD4L-227ENST00000590020 TRBV7-6A0A0J9YX20 115 aa6.17□□□□□ -1.42
NEDD4L-227ENST00000590020 A0A1B0GWB2 263 aa6.17□□□□□ -1.42
NEDD4L-227ENST00000590020 DPM2O94777 84 aa6.17□□□□□ -1.42
NEDD4L-227ENST00000590020 LST1O00453 97 aa6.15□□□□□ -1.42
NEDD4L-227ENST00000590020 HSBP1O75506 76 aa6.15□□□□□ -1.42
NEDD4L-227ENST00000590020 IGKCP01834 107 aa6.15□□□□□ -1.42
NEDD4L-227ENST00000590020 CLEC2BQ92478 149 aa6.15□□□□□ -1.42
NEDD4L-227ENST00000590020 SERF1AO75920 110 aa6.14□□□□□ -1.43
NEDD4L-227ENST00000590020 DSCR10P59022 87 aa6.14□□□□□ -1.43
NEDD4L-227ENST00000590020 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
NEDD4L-227ENST00000590020 LINC00310P59036 64 aa6.13□□□□□ -1.43
NEDD4L-227ENST00000590020 Q6JHZ5 121 aa6.12□□□□□ -1.43
NEDD4L-227ENST00000590020 UQCC3Q6UW78 93 aa6.12□□□□□ -1.43
NEDD4L-227ENST00000590020 Q6ZVH6 145 aa6.12□□□□□ -1.43
NEDD4L-227ENST00000590020 E9PLD3 99 aa6.11□□□□□ -1.43
NEDD4L-227ENST00000590020 FABP4P15090 132 aa6.11□□□□□ -1.43
NEDD4L-227ENST00000590020 CLLU1Q5K131 121 aa6.11□□□□□ -1.43
NEDD4L-227ENST00000590020 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
NEDD4L-227ENST00000590020 A6NDN8 102 aa6.1□□□□□ -1.43
NEDD4L-227ENST00000590020 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
NEDD4L-227ENST00000590020 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
NEDD4L-227ENST00000590020 TIMM17BO60830 172 aa6.09□□□□□ -1.43
NEDD4L-227ENST00000590020 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
NEDD4L-227ENST00000590020 NHP2Q9NX24 153 aaKnown RBP6.08□□□□□ -1.44
NEDD4L-227ENST00000590020 A4D1N5 150 aa6.07□□□□□ -1.44
NEDD4L-227ENST00000590020 TRAV13-2A0A0B4J235 113 aa6.06□□□□□ -1.44
NEDD4L-227ENST00000590020 ZNF815PA8K554 130 aa6.06□□□□□ -1.44
NEDD4L-227ENST00000590020 H3BUT2 72 aa6.06□□□□□ -1.44
NEDD4L-227ENST00000590020 Q6ZQY7 126 aa6.06□□□□□ -1.44
NEDD4L-227ENST00000590020 A8MWP4 228 aa6.05□□□□□ -1.44
NEDD4L-227ENST00000590020 SMIM11BQ8TCY0 68 aa6.05□□□□□ -1.44
NEDD4L-227ENST00000590020 MDN1Q9NU22 5596 aa6.05□□□□□ -1.44
NEDD4L-227ENST00000590020 HSPB8Q9UJY1 196 aa6.04□□□□□ -1.44
NEDD4L-227ENST00000590020 MTURNQ8N3F0 131 aa6.02□□□□□ -1.45
NEDD4L-227ENST00000590020 LINC00575Q6W349 94 aa6.01□□□□□ -1.45
NEDD4L-227ENST00000590020 TMEM238LA0A1B0GVL6 79 aa6□□□□□ -1.45
NEDD4L-227ENST00000590020 ANKRD39Q53RE8 183 aa6□□□□□ -1.45
NEDD4L-227ENST00000590020 SS18L2Q9UHA2 77 aa6□□□□□ -1.45
NEDD4L-227ENST00000590020 KMT2DO14686 5537 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 hADV29S1A0JD25 119 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 A6NN06 94 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 COLCA2A8K830 154 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 H3BS24 57 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 LINC00313P59037 77 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 YPEL4Q96NS1 127 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
NEDD4L-227ENST00000590020 A0A087WSZ3 146 aa5.98□□□□□ -1.45
NEDD4L-227ENST00000590020 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
NEDD4L-227ENST00000590020 MUSTN1Q8IVN3 82 aa5.98□□□□□ -1.45
NEDD4L-227ENST00000590020 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
NEDD4L-227ENST00000590020 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
NEDD4L-227ENST00000590020 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
NEDD4L-227ENST00000590020 APOC3P02656 99 aa5.96□□□□□ -1.46
NEDD4L-227ENST00000590020 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
NEDD4L-227ENST00000590020 TRGC2P03986 189 aa5.95□□□□□ -1.46
NEDD4L-227ENST00000590020 VAMP3Q15836 100 aa5.95□□□□□ -1.46
NEDD4L-227ENST00000590020 IFITM1P13164 125 aa5.93□□□□□ -1.46
NEDD4L-227ENST00000590020 TEN1Q86WV5 123 aa5.93□□□□□ -1.46
NEDD4L-227ENST00000590020 SYS1-DBNDD2H3BUS1 97 aa5.92□□□□□ -1.46
NEDD4L-227ENST00000590020 COPS9Q8WXC6 57 aa5.92□□□□□ -1.46
NEDD4L-227ENST00000590020 SPINK7P58062 85 aa5.91□□□□□ -1.46
NEDD4L-227ENST00000590020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.91□□□□□ -1.46
NEDD4L-227ENST00000590020 SNAPINO95295 136 aa5.9□□□□□ -1.46
NEDD4L-227ENST00000590020 IGKV4-1P06312 121 aa5.9□□□□□ -1.46
NEDD4L-227ENST00000590020 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
NEDD4L-227ENST00000590020 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
NEDD4L-227ENST00000590020 LINC01545Q5VT33 79 aa5.88□□□□□ -1.47
NEDD4L-227ENST00000590020 WFDC13Q8IUB5 93 aa5.87□□□□□ -1.47
NEDD4L-227ENST00000590020 SVBPQ8N300 66 aa5.87□□□□□ -1.47
NEDD4L-227ENST00000590020 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
NEDD4L-227ENST00000590020 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
NEDD4L-227ENST00000590020 A0A1W2PNM2 257 aa5.86□□□□□ -1.47
NEDD4L-227ENST00000590020 MT1BP07438 61 aa5.85□□□□□ -1.47
NEDD4L-227ENST00000590020 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
NEDD4L-227ENST00000590020 NDUFV3P56181 108 aaKnown RBP5.82□□□□□ -1.48
NEDD4L-227ENST00000590020 NDUFA5Q16718 116 aa5.82□□□□□ -1.48
NEDD4L-227ENST00000590020 PET117Q6UWS5 81 aa5.82□□□□□ -1.48
NEDD4L-227ENST00000590020 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
NEDD4L-227ENST00000590020 H3BMG7 143 aa5.79□□□□□ -1.48
NEDD4L-227ENST00000590020 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
NEDD4L-227ENST00000590020 C3orf79P0CE67 100 aa5.78□□□□□ -1.48
NEDD4L-227ENST00000590020 ATOH7Q8N100 152 aa5.78□□□□□ -1.48
NEDD4L-227ENST00000590020 C12orf57Q99622 126 aa5.78□□□□□ -1.48
NEDD4L-227ENST00000590020 SPRR2EP22531 72 aa5.77□□□□□ -1.49
NEDD4L-227ENST00000590020 SPRR2BP35325 72 aa5.77□□□□□ -1.49
NEDD4L-227ENST00000590020 SPRR2AP35326 72 aa5.77□□□□□ -1.49
NEDD4L-227ENST00000590020 BVES-AS1Q5T3Y7 98 aa5.77□□□□□ -1.49
NEDD4L-227ENST00000590020 Q5VV11 94 aa5.77□□□□□ -1.49
NEDD4L-227ENST00000590020 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
NEDD4L-227ENST00000590020 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
NEDD4L-227ENST00000590020 LINC00472Q9H8W2 130 aa5.76□□□□□ -1.49
NEDD4L-227ENST00000590020 A0A1B0GV72 72 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms