RNA–Protein interactions for RNA: ENST00000576084.5

COX11-208, Transcript of cytochrome c oxidase copper chaperone COX11, human

TSL 3

Gene COX11, Length 652 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COX11-208	ENST00000576084	ETDC	A0A1B0GVM5	59 aa		0.86	□□□□□ -2.27
COX11-208	ENST00000576084	HMGB3	O15347	200 aa	Known RBP	0.86	□□□□□ -2.27
COX11-208	ENST00000576084	SFT2D2	O95562	160 aa		0.86	□□□□□ -2.27
COX11-208	ENST00000576084	S100A11	P31949	105 aa		0.86	□□□□□ -2.27
COX11-208	ENST00000576084	ZNF345	Q14585	488 aa		0.86	□□□□□ -2.27
COX11-208	ENST00000576084	KRTAP19-3	Q7Z4W3	81 aa		0.86	□□□□□ -2.27
COX11-208	ENST00000576084	WDR61	Q9GZS3	305 aa	Known RBP	0.86	□□□□□ -2.27
COX11-208	ENST00000576084	IFNA1	P01562	189 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	AKAIN1	P0CW23	69 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	SULT1A1	P50225	295 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	HBB	P68871	147 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	IFITM2	Q01629	132 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	TMEM128	Q5BJH2	165 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	STX12	Q86Y82	276 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084		Q8IZM0	81 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	SCP2D1	Q9UJQ7	156 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	ZFP30	Q9Y2G7	519 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	TPRKB	Q9Y3C4	175 aa		0.85	□□□□□ -2.27
COX11-208	ENST00000576084	TRAV9-1	A0A075B6T8	112 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	C17orf112	F2Z3M2	114 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	IGLC6	P0CF74	106 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	GCHFR	P30047	84 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	FCER1G	P30273	86 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	SPRR1A	P35321	89 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	ST20	Q9HBF5	79 aa		0.84	□□□□□ -2.27
COX11-208	ENST00000576084	TRBV27	A0A0K0K1C4	114 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	FAM25A	B3EWG3	89 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	FAM25C	B3EWG5	89 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	FAM25G	B3EWG6	89 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	TCL1B	O95988	128 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	UBE2G1	P62253	170 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	SSBP1	Q04837	148 aa	Known RBP	0.83	□□□□□ -2.28
COX11-208	ENST00000576084	ALKAL2	Q6UX46	152 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	SOSTDC1	Q6X4U4	206 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	MCFD2	Q8NI22	146 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084	PRO1933	Q9H354	126 aa		0.83	□□□□□ -2.28
COX11-208	ENST00000576084		A0A1W2PRE2	83 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084		H0YAA0	97 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BO	P23527	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BB	P33778	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	POLR2K	P53803	58 aa	Known RBP	0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BD	P58876	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BC	P62807	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	RPL39	P62891	51 aa	Known RBP	0.82	□□□□□ -2.28
COX11-208	ENST00000576084	MRPS36	P82909	103 aa	Known RBP	0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST2H2BE	Q16778	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.82	□□□□□ -2.28
COX11-208	ENST00000576084	TEX261	Q6UWH6	196 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	WFDC13	Q8IUB5	93 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BH	Q93079	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BN	Q99877	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	HIST1H2BM	Q99879	126 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	KCNQ1DN	Q9H478	68 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	TMEM167B	Q9NRX6	74 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	SPANXA1	Q9NS26	97 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	LAMTOR3	Q9UHA4	124 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084	MUC16	Q8WXI7	14507 aa		0.82	□□□□□ -2.28
COX11-208	ENST00000576084		F2Z2F3	143 aa		0.81	□□□□□ -2.28
COX11-208	ENST00000576084	SPRR1B	P22528	89 aa		0.81	□□□□□ -2.28
COX11-208	ENST00000576084	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.81	□□□□□ -2.28
COX11-208	ENST00000576084		Q6ZQT0	140 aa		0.81	□□□□□ -2.28
COX11-208	ENST00000576084		Q6ZRX8	168 aa		0.81	□□□□□ -2.28
COX11-208	ENST00000576084	SMIM4	Q8WVI0	70 aa		0.81	□□□□□ -2.28
COX11-208	ENST00000576084	SCGB3A1	Q96QR1	104 aa		0.81	□□□□□ -2.28
COX11-208	ENST00000576084	TRBV10-3	A0A0K0K1G6	114 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	NCR3	O14931	201 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	MT1E	P04732	61 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	AKR1D1	P51857	326 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	NDUFA6	P56556	154 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	SPINK7	P58062	85 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	LSM3	P62310	102 aa	Known RBP	0.8	□□□□□ -2.28
COX11-208	ENST00000576084	GNGT1	P63211	74 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	MRPS10	P82664	201 aa	Known RBP	0.8	□□□□□ -2.28
COX11-208	ENST00000576084	KLKP1	Q107X0	134 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	H1FX-AS1	Q4G0G2	97 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	SMIM15	Q7Z3B0	74 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	ANKRD29	Q8N6D5	301 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	COX7B2	Q8TF08	81 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	TOMM6	Q96B49	74 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	TMEM191A	Q9H0A3	160 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	CDKN2A-AS1	Q9UH64	79 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	SNURF	Q9Y675	71 aa		0.8	□□□□□ -2.28
COX11-208	ENST00000576084	SYNE1	Q8NF91	8797 aa	Known RBP	0.8	□□□□□ -2.28
COX11-208	ENST00000576084		D6R8Y8	96 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	ATP5H	O75947	161 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	MT1G	P13640	62 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	KRTAP19-7	Q3SYF9	63 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	LCA10	Q71F78	164 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	BAGE2	Q86Y30	109 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	MT1M	Q8N339	61 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	C9orf62	Q8N4C0	152 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	C2orf88	Q9BSF0	95 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084	CNFN	Q9BYD5	112 aa		0.79	□□□□□ -2.28
COX11-208	ENST00000576084		A0A087WXM4	84 aa		0.78	□□□□□ -2.28
COX11-208	ENST00000576084	SIX6	O95475	246 aa		0.78	□□□□□ -2.28
COX11-208	ENST00000576084	FAU	P35544	74 aa	Known RBP	0.78	□□□□□ -2.28
COX11-208	ENST00000576084	IFI27	P40305	119 aa	Predicted RBP	0.78	□□□□□ -2.28
COX11-208	ENST00000576084	S100A12	P80511	92 aa		0.78	□□□□□ -2.28
COX11-208	ENST00000576084	PRR15	Q8IV56	129 aa		0.78	□□□□□ -2.28
COX11-208	ENST00000576084	TMEM141	Q96I45	108 aa		0.78	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms