RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 SMR3AQ99954 134 aa10.56□□□□□ -0.72
LITAF-209ENST00000571688 Q75L30 129 aa10.56□□□□□ -0.72
LITAF-209ENST00000571688 TRRAPQ9Y4A5 3859 aa10.56□□□□□ -0.72
LITAF-209ENST00000571688 KTN1-AS1Q86SY8 53 aa10.55□□□□□ -0.72
LITAF-209ENST00000571688 LOC101927531A0A1B0GV80 90 aa10.54□□□□□ -0.72
LITAF-209ENST00000571688 LCA10Q71F78 164 aa10.54□□□□□ -0.72
LITAF-209ENST00000571688 TENM1Q9UKZ4 2725 aa10.52□□□□□ -0.73
LITAF-209ENST00000571688 DEFB131BA0A096LNP1 70 aa10.52□□□□□ -0.73
LITAF-209ENST00000571688 A8MWP4 228 aa10.52□□□□□ -0.73
LITAF-209ENST00000571688 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
LITAF-209ENST00000571688 PRLHP81277 87 aa10.51□□□□□ -0.73
LITAF-209ENST00000571688 COA5Q86WW8 74 aa10.51□□□□□ -0.73
LITAF-209ENST00000571688 IGLV7-46A0A075B6I9 117 aa10.49□□□□□ -0.73
LITAF-209ENST00000571688 SPTSSBQ8NFR3 76 aa10.49□□□□□ -0.73
LITAF-209ENST00000571688 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
LITAF-209ENST00000571688 NOTCH2Q04721 2471 aa10.49□□□□□ -0.73
LITAF-209ENST00000571688 F8P00451 2351 aa10.47□□□□□ -0.73
LITAF-209ENST00000571688 A6NED7 52 aa10.47□□□□□ -0.73
LITAF-209ENST00000571688 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
LITAF-209ENST00000571688 A6NN06 94 aa10.45□□□□□ -0.74
LITAF-209ENST00000571688 RBM12B-AS1Q9P1G2 102 aa10.44□□□□□ -0.74
LITAF-209ENST00000571688 MMP24-AS1A0A0U1RRL7 71 aa10.44□□□□□ -0.74
LITAF-209ENST00000571688 ANK2Q01484 3957 aa10.43□□□□□ -0.74
LITAF-209ENST00000571688 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
LITAF-209ENST00000571688 NDUFS5O43920 106 aa10.43□□□□□ -0.74
LITAF-209ENST00000571688 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
LITAF-209ENST00000571688 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
LITAF-209ENST00000571688 SPRR1BP22528 89 aa10.41□□□□□ -0.74
LITAF-209ENST00000571688 TENM4Q6N022 2769 aa10.41□□□□□ -0.74
LITAF-209ENST00000571688 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
LITAF-209ENST00000571688 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
LITAF-209ENST00000571688 TENM3Q9P273 2699 aa10.4□□□□□ -0.75
LITAF-209ENST00000571688 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
LITAF-209ENST00000571688 A0A096LNI7 61 aa10.39□□□□□ -0.75
LITAF-209ENST00000571688 KRTAP10-11P60412 298 aa10.38□□□□□ -0.75
LITAF-209ENST00000571688 TEP1Q99973 2627 aaKnown RBP10.38□□□□□ -0.75
LITAF-209ENST00000571688 H0Y9J4 135 aa10.37□□□□□ -0.75
LITAF-209ENST00000571688 PCOTHQ58A44 107 aa10.36□□□□□ -0.75
LITAF-209ENST00000571688 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
LITAF-209ENST00000571688 IGKV2-24A0A0C4DH68 120 aa10.36□□□□□ -0.75
LITAF-209ENST00000571688 ATRQ13535 2644 aa10.35□□□□□ -0.75
LITAF-209ENST00000571688 INAFM1C9JVW0 142 aa10.35□□□□□ -0.75
LITAF-209ENST00000571688 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
LITAF-209ENST00000571688 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
LITAF-209ENST00000571688 TP53AIP1Q9HCN2 124 aa10.33□□□□□ -0.76
LITAF-209ENST00000571688 BAHCC1Q9P281 2608 aa10.33□□□□□ -0.76
LITAF-209ENST00000571688 MOBPQ13875 183 aa10.32□□□□□ -0.76
LITAF-209ENST00000571688 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
LITAF-209ENST00000571688 Q6ZR54 194 aa10.31□□□□□ -0.76
LITAF-209ENST00000571688 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
LITAF-209ENST00000571688 DNAH10Q8IVF4 4471 aa10.3□□□□□ -0.76
LITAF-209ENST00000571688 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
LITAF-209ENST00000571688 SRRM2Q9UQ35 2752 aaKnown RBP10.28□□□□□ -0.76
LITAF-209ENST00000571688 Q96NJ1 140 aa10.28□□□□□ -0.76
LITAF-209ENST00000571688 HRES1P13985 223 aa10.26□□□□□ -0.77
LITAF-209ENST00000571688 SPINK7P58062 85 aa10.26□□□□□ -0.77
LITAF-209ENST00000571688 CMYA5Q8N3K9 4069 aa10.26□□□□□ -0.77
LITAF-209ENST00000571688 NSD1Q96L73 2696 aaPredicted RBP10.26□□□□□ -0.77
LITAF-209ENST00000571688 FASNP49327 2511 aaKnown RBP10.25□□□□□ -0.77
LITAF-209ENST00000571688 C8orf17Q9NRJ1 99 aa10.24□□□□□ -0.77
LITAF-209ENST00000571688 DNAH3Q8TD57 4116 aa10.23□□□□□ -0.77
LITAF-209ENST00000571688 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
LITAF-209ENST00000571688 LYSTQ99698 3801 aa10.2□□□□□ -0.78
LITAF-209ENST00000571688 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
LITAF-209ENST00000571688 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
LITAF-209ENST00000571688 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
LITAF-209ENST00000571688 KRTAP13-1Q8IUC0 172 aa10.16□□□□□ -0.78
LITAF-209ENST00000571688 A0A1B0GVX0 72 aa10.15□□□□□ -0.78
LITAF-209ENST00000571688 CSMD3Q7Z407 3707 aa10.15□□□□□ -0.78
LITAF-209ENST00000571688 FLNBO75369 2602 aaKnown RBP10.14□□□□□ -0.79
LITAF-209ENST00000571688 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
LITAF-209ENST00000571688 IGHV6-1A0A0B4J1U7 121 aa10.13□□□□□ -0.79
LITAF-209ENST00000571688 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
LITAF-209ENST00000571688 ALMS1Q8TCU4 4167 aa10.13□□□□□ -0.79
LITAF-209ENST00000571688 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
LITAF-209ENST00000571688 HUWE1Q7Z6Z7 4374 aaKnown RBP10.1□□□□□ -0.79
LITAF-209ENST00000571688 PRR26Q8N8Z3 221 aa10.09□□□□□ -0.79
LITAF-209ENST00000571688 FBN1P35555 2871 aaKnown RBP10.09□□□□□ -0.79
LITAF-209ENST00000571688 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
LITAF-209ENST00000571688 MAST4O15021 2626 aa10.07□□□□□ -0.8
LITAF-209ENST00000571688 J3QKU1 62 aa10.06□□□□□ -0.8
LITAF-209ENST00000571688 A0A087X002 238 aa10.05□□□□□ -0.8
LITAF-209ENST00000571688 NOTCH2NLQ7Z3S9 236 aa10.05□□□□□ -0.8
LITAF-209ENST00000571688 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
LITAF-209ENST00000571688 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
LITAF-209ENST00000571688 LINC00313P59037 77 aa10.04□□□□□ -0.8
LITAF-209ENST00000571688 MDFIQ99750 246 aa10.04□□□□□ -0.8
LITAF-209ENST00000571688 K7EIL1 84 aa10.03□□□□□ -0.8
LITAF-209ENST00000571688 KRTAP13-3Q3SY46 172 aa10.03□□□□□ -0.8
LITAF-209ENST00000571688 PANO1I0J062 215 aa10.02□□□□□ -0.81
LITAF-209ENST00000571688 Q5W150 140 aa10□□□□□ -0.81
LITAF-209ENST00000571688 C8orf87E5RJ46 101 aa10□□□□□ -0.81
LITAF-209ENST00000571688 ACYP2P14621 99 aa9.99□□□□□ -0.81
LITAF-209ENST00000571688 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
LITAF-209ENST00000571688 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
LITAF-209ENST00000571688 HECTD1Q9ULT8 2610 aa9.96□□□□□ -0.81
LITAF-209ENST00000571688 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
LITAF-209ENST00000571688 COL7A1Q02388 2944 aa9.94□□□□□ -0.82
LITAF-209ENST00000571688 ZNF706Q9Y5V0 76 aaPredicted RBP9.93□□□□□ -0.82
LITAF-209ENST00000571688 DMAC1Q96GE9 116 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms