RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 TRBV20-1A0A075B6N2 111 aa10.59□□□□□ -0.71
LINC01238-205ENST00000567549 K7EP34 96 aa10.59□□□□□ -0.71
LINC01238-205ENST00000567549 B5MCH6 92 aa10.58□□□□□ -0.72
LINC01238-205ENST00000567549 Q6ZRX8 168 aa10.58□□□□□ -0.72
LINC01238-205ENST00000567549 OR13C6PQ8NH95 151 aa10.58□□□□□ -0.72
LINC01238-205ENST00000567549 MOBPQ13875 183 aa10.56□□□□□ -0.72
LINC01238-205ENST00000567549 LCE2AQ5TA79 106 aaPredicted RBP10.56□□□□□ -0.72
LINC01238-205ENST00000567549 IGLV9-49A0A0B4J1Y8 123 aa10.55□□□□□ -0.72
LINC01238-205ENST00000567549 TRIAP1O43715 76 aa10.55□□□□□ -0.72
LINC01238-205ENST00000567549 SLC25A20O43772 301 aa10.55□□□□□ -0.72
LINC01238-205ENST00000567549 SEC61BP60468 96 aaKnown RBP10.55□□□□□ -0.72
LINC01238-205ENST00000567549 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
LINC01238-205ENST00000567549 TRAV23DV6A0A075B6W5 121 aa10.52□□□□□ -0.73
LINC01238-205ENST00000567549 SMIM11BQ8TCY0 68 aa10.52□□□□□ -0.73
LINC01238-205ENST00000567549 KRTAP9-2Q9BYQ4 174 aa10.52□□□□□ -0.73
LINC01238-205ENST00000567549 H0YGX0 51 aa10.51□□□□□ -0.73
LINC01238-205ENST00000567549 IGLV6-57P01721 117 aa10.51□□□□□ -0.73
LINC01238-205ENST00000567549 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
LINC01238-205ENST00000567549 ASB16-AS1Q495Z4 193 aa10.51□□□□□ -0.73
LINC01238-205ENST00000567549 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
LINC01238-205ENST00000567549 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
LINC01238-205ENST00000567549 ZNF73O43830 326 aaPredicted RBP10.49□□□□□ -0.73
LINC01238-205ENST00000567549 TCL1BO95988 128 aa10.49□□□□□ -0.73
LINC01238-205ENST00000567549 Q9BRP9 147 aa10.49□□□□□ -0.73
LINC01238-205ENST00000567549 H3BMG7 143 aa10.48□□□□□ -0.73
LINC01238-205ENST00000567549 Q8N377 158 aa10.48□□□□□ -0.73
LINC01238-205ENST00000567549 ERC2-IT1O76042 136 aa10.47□□□□□ -0.73
LINC01238-205ENST00000567549 F8W1H4 67 aa10.46□□□□□ -0.73
LINC01238-205ENST00000567549 LINC01547P58512 204 aaPredicted RBP10.46□□□□□ -0.73
LINC01238-205ENST00000567549 LST1O00453 97 aa10.44□□□□□ -0.74
LINC01238-205ENST00000567549 LIMD2Q9BT23 127 aa10.44□□□□□ -0.74
LINC01238-205ENST00000567549 SNCGO76070 127 aa10.43□□□□□ -0.74
LINC01238-205ENST00000567549 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
LINC01238-205ENST00000567549 MUC17Q685J3 4493 aa10.43□□□□□ -0.74
LINC01238-205ENST00000567549 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
LINC01238-205ENST00000567549 TRBV7-6A0A0J9YX20 115 aa10.41□□□□□ -0.74
LINC01238-205ENST00000567549 A0A1B0GX51 115 aa10.41□□□□□ -0.74
LINC01238-205ENST00000567549 TRACP01848 142 aa10.41□□□□□ -0.74
LINC01238-205ENST00000567549 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
LINC01238-205ENST00000567549 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
LINC01238-205ENST00000567549 C9JAW5 83 aa10.38□□□□□ -0.75
LINC01238-205ENST00000567549 PRO0461Q9UI25 63 aa10.38□□□□□ -0.75
LINC01238-205ENST00000567549 XP32Q5T750 250 aa10.36□□□□□ -0.75
LINC01238-205ENST00000567549 DNAL4O96015 105 aa10.35□□□□□ -0.75
LINC01238-205ENST00000567549 SPRR1BP22528 89 aa10.35□□□□□ -0.75
LINC01238-205ENST00000567549 H3BT86 120 aa10.34□□□□□ -0.75
LINC01238-205ENST00000567549 COX7BP24311 80 aa10.34□□□□□ -0.75
LINC01238-205ENST00000567549 ST20-AS1Q8NBB2 130 aa10.34□□□□□ -0.75
LINC01238-205ENST00000567549 FAM218AQ96MZ4 157 aa10.34□□□□□ -0.75
LINC01238-205ENST00000567549 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
LINC01238-205ENST00000567549 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
LINC01238-205ENST00000567549 ELOF1P60002 83 aaKnown RBP10.31□□□□□ -0.76
LINC01238-205ENST00000567549 hADV29S1A0JD25 119 aa10.3□□□□□ -0.76
LINC01238-205ENST00000567549 CD164Q04900 197 aa10.3□□□□□ -0.76
LINC01238-205ENST00000567549 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
LINC01238-205ENST00000567549 H3BQ85 93 aa10.29□□□□□ -0.76
LINC01238-205ENST00000567549 GHRHP01286 108 aa10.29□□□□□ -0.76
LINC01238-205ENST00000567549 BAALC-AS2P0C853 105 aa10.29□□□□□ -0.76
LINC01238-205ENST00000567549 ORMDL1Q9P0S3 153 aa10.27□□□□□ -0.77
LINC01238-205ENST00000567549 TEX49A0A1B0GTD5 131 aa10.26□□□□□ -0.77
LINC01238-205ENST00000567549 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
LINC01238-205ENST00000567549 TEN1Q86WV5 123 aa10.26□□□□□ -0.77
LINC01238-205ENST00000567549 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
LINC01238-205ENST00000567549 OCIAD2Q56VL3 154 aa10.25□□□□□ -0.77
LINC01238-205ENST00000567549 HRCT1Q6UXD1 115 aa10.25□□□□□ -0.77
LINC01238-205ENST00000567549 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
LINC01238-205ENST00000567549 TMEM256-PLSCR3K7ERE1 68 aa10.23□□□□□ -0.77
LINC01238-205ENST00000567549 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
LINC01238-205ENST00000567549 J3QR89 54 aa10.21□□□□□ -0.77
LINC01238-205ENST00000567549 PPDPFLQ8WWR9 84 aa10.21□□□□□ -0.77
LINC01238-205ENST00000567549 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.77
LINC01238-205ENST00000567549 K7ERU9 68 aa10.2□□□□□ -0.78
LINC01238-205ENST00000567549 Q5XG85 94 aa10.19□□□□□ -0.78
LINC01238-205ENST00000567549 Q6ZQY7 126 aa10.18□□□□□ -0.78
LINC01238-205ENST00000567549 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
LINC01238-205ENST00000567549 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
LINC01238-205ENST00000567549 PCOTHQ58A44 107 aa10.15□□□□□ -0.78
LINC01238-205ENST00000567549 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
LINC01238-205ENST00000567549 F8WEM9 126 aa10.13□□□□□ -0.79
LINC01238-205ENST00000567549 JMJD7-PLA2G4BH0Y9G9 81 aa10.13□□□□□ -0.79
LINC01238-205ENST00000567549 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
LINC01238-205ENST00000567549 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
LINC01238-205ENST00000567549 SMIM29Q86T20 159 aa10.08□□□□□ -0.8
LINC01238-205ENST00000567549 C1orf195Q5TG92 126 aa10.07□□□□□ -0.8
LINC01238-205ENST00000567549 NDUFV3P56181 108 aaKnown RBP10.05□□□□□ -0.8
LINC01238-205ENST00000567549 RBM3P98179 157 aaKnown RBP10.05□□□□□ -0.8
LINC01238-205ENST00000567549 C21orf62-AS1Q17RA5 79 aa10.04□□□□□ -0.8
LINC01238-205ENST00000567549 PDE6GP18545 87 aa10.03□□□□□ -0.8
LINC01238-205ENST00000567549 Q6JHZ5 121 aa10.03□□□□□ -0.8
LINC01238-205ENST00000567549 ACYP1P07311 99 aa10.02□□□□□ -0.81
LINC01238-205ENST00000567549 RPL37P61927 97 aaKnown RBP10.02□□□□□ -0.81
LINC01238-205ENST00000567549 DSCR8Q96T75 97 aa10.01□□□□□ -0.81
LINC01238-205ENST00000567549 FAM240AA0A1B0GVK7 77 aa10□□□□□ -0.81
LINC01238-205ENST00000567549 COX6B2Q6YFQ2 88 aa10□□□□□ -0.81
LINC01238-205ENST00000567549 C14orf132Q9NPU4 83 aa10□□□□□ -0.81
LINC01238-205ENST00000567549 LOC110117498A0A087WWA1 95 aa9.98□□□□□ -0.81
LINC01238-205ENST00000567549 CCKP06307 115 aa9.98□□□□□ -0.81
LINC01238-205ENST00000567549 MT1HP80294 61 aa9.98□□□□□ -0.81
LINC01238-205ENST00000567549 KRTAP19-2Q3LHN2 52 aa9.96□□□□□ -0.82
LINC01238-205ENST00000567549 M0R2T5 61 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms