RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 DEFB105AQ8NG35 78 aa8.96□□□□□ -0.98
RABGGTA-220ENST00000560998 NDUFS5O43920 106 aa8.95□□□□□ -0.98
RABGGTA-220ENST00000560998 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
RABGGTA-220ENST00000560998 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 DNAH1Q9P2D7 4330 aa8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 PRR4Q16378 134 aa8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 CASC10Q5T4H9 136 aa8.93□□□□□ -0.98
RABGGTA-220ENST00000560998 Q6ZRX8 168 aa8.92□□□□□ -0.98
RABGGTA-220ENST00000560998 MGAM2Q2M2H8 2515 aa8.92□□□□□ -0.98
RABGGTA-220ENST00000560998 Q75L30 129 aa8.92□□□□□ -0.98
RABGGTA-220ENST00000560998 C16orf90A8MZG2 172 aa8.91□□□□□ -0.98
RABGGTA-220ENST00000560998 TLX1NBP0CAT3 122 aa8.9□□□□□ -0.98
RABGGTA-220ENST00000560998 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.99
RABGGTA-220ENST00000560998 PHF5AQ7RTV0 110 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-220ENST00000560998 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
RABGGTA-220ENST00000560998 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
RABGGTA-220ENST00000560998 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
RABGGTA-220ENST00000560998 SERTAD4-AS1Q5TG53 156 aa8.88□□□□□ -0.99
RABGGTA-220ENST00000560998 PRR15LQ9BU68 103 aa8.88□□□□□ -0.99
RABGGTA-220ENST00000560998 KRTAP4-16G5E9R7 235 aaPredicted RBP8.87□□□□□ -0.99
RABGGTA-220ENST00000560998 SPRR1AP35321 89 aa8.86□□□□□ -0.99
RABGGTA-220ENST00000560998 A8MU10 97 aa8.86□□□□□ -0.99
RABGGTA-220ENST00000560998 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
RABGGTA-220ENST00000560998 A6NN06 94 aa8.84□□□□□ -0.99
RABGGTA-220ENST00000560998 DNAH9Q9NYC9 4486 aa8.84□□□□□ -0.99
RABGGTA-220ENST00000560998 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
RABGGTA-220ENST00000560998 MDFIQ99750 246 aa8.84□□□□□ -0.99
RABGGTA-220ENST00000560998 H0Y9P7 68 aa8.83□□□□□ -1
RABGGTA-220ENST00000560998 STAB2Q8WWQ8 2551 aa8.83□□□□□ -1
RABGGTA-220ENST00000560998 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
RABGGTA-220ENST00000560998 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
RABGGTA-220ENST00000560998 FAM168BA1KXE4 195 aa8.82□□□□□ -1
RABGGTA-220ENST00000560998 LCA10Q71F78 164 aa8.82□□□□□ -1
RABGGTA-220ENST00000560998 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
RABGGTA-220ENST00000560998 IGLV1-50A0A075B6I6 118 aa8.81□□□□□ -1
RABGGTA-220ENST00000560998 A6NED7 52 aa8.81□□□□□ -1
RABGGTA-220ENST00000560998 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
RABGGTA-220ENST00000560998 C9orf163Q8N9P6 203 aa8.81□□□□□ -1
RABGGTA-220ENST00000560998 KRTAP1-5Q9BYS1 174 aa8.81□□□□□ -1
RABGGTA-220ENST00000560998 DYNC2H1Q8NCM8 4307 aaKnown RBP8.81□□□□□ -1
RABGGTA-220ENST00000560998 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
RABGGTA-220ENST00000560998 LINC00476Q8WZB0 136 aa8.8□□□□□ -1
RABGGTA-220ENST00000560998 APLNQ9ULZ1 77 aa8.8□□□□□ -1
RABGGTA-220ENST00000560998 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
RABGGTA-220ENST00000560998 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
RABGGTA-220ENST00000560998 COA5Q86WW8 74 aa8.77□□□□□ -1.01
RABGGTA-220ENST00000560998 UBE2DNLQ8IWF7 75 aa8.77□□□□□ -1.01
RABGGTA-220ENST00000560998 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
RABGGTA-220ENST00000560998 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
RABGGTA-220ENST00000560998 IGLV7-46A0A075B6I9 117 aa8.75□□□□□ -1.01
RABGGTA-220ENST00000560998 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
RABGGTA-220ENST00000560998 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
RABGGTA-220ENST00000560998 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-220ENST00000560998 DNAH10Q8IVF4 4471 aa8.73□□□□□ -1.01
RABGGTA-220ENST00000560998 PLAC8Q9NZF1 115 aa8.72□□□□□ -1.01
RABGGTA-220ENST00000560998 LYSTQ99698 3801 aa8.72□□□□□ -1.01
RABGGTA-220ENST00000560998 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
RABGGTA-220ENST00000560998 A0A087WSZ3 146 aa8.7□□□□□ -1.02
RABGGTA-220ENST00000560998 A0A096LNI7 61 aa8.7□□□□□ -1.02
RABGGTA-220ENST00000560998 A8MWP4 228 aa8.7□□□□□ -1.02
RABGGTA-220ENST00000560998 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
RABGGTA-220ENST00000560998 REG3GQ6UW15 175 aa8.68□□□□□ -1.02
RABGGTA-220ENST00000560998 MOBPQ13875 183 aa8.68□□□□□ -1.02
RABGGTA-220ENST00000560998 NUPR2A6NF83 97 aa8.67□□□□□ -1.02
RABGGTA-220ENST00000560998 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
RABGGTA-220ENST00000560998 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
RABGGTA-220ENST00000560998 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
RABGGTA-220ENST00000560998 PLECQ15149 4684 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-220ENST00000560998 TENM2Q9NT68 2774 aa8.65□□□□□ -1.02
RABGGTA-220ENST00000560998 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
RABGGTA-220ENST00000560998 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
RABGGTA-220ENST00000560998 DNAH7Q8WXX0 4024 aa8.64□□□□□ -1.03
RABGGTA-220ENST00000560998 TP53AIP1Q9HCN2 124 aa8.62□□□□□ -1.03
RABGGTA-220ENST00000560998 LINC00472Q9H8W2 130 aa8.62□□□□□ -1.03
RABGGTA-220ENST00000560998 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-220ENST00000560998 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
RABGGTA-220ENST00000560998 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
RABGGTA-220ENST00000560998 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
RABGGTA-220ENST00000560998 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
RABGGTA-220ENST00000560998 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
RABGGTA-220ENST00000560998 SPRR1BP22528 89 aa8.57□□□□□ -1.04
RABGGTA-220ENST00000560998 PRLHP81277 87 aa8.57□□□□□ -1.04
RABGGTA-220ENST00000560998 PRKDCP78527 4128 aaKnown RBP8.57□□□□□ -1.04
RABGGTA-220ENST00000560998 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
RABGGTA-220ENST00000560998 STARD9Q9P2P6 4700 aa8.56□□□□□ -1.04
RABGGTA-220ENST00000560998 C8orf87E5RJ46 101 aa8.55□□□□□ -1.04
RABGGTA-220ENST00000560998 Q6ZR54 194 aa8.55□□□□□ -1.04
RABGGTA-220ENST00000560998 SPINK7P58062 85 aa8.54□□□□□ -1.04
RABGGTA-220ENST00000560998 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
RABGGTA-220ENST00000560998 PCOTHQ58A44 107 aa8.53□□□□□ -1.04
RABGGTA-220ENST00000560998 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
RABGGTA-220ENST00000560998 H0Y9J4 135 aa8.52□□□□□ -1.05
RABGGTA-220ENST00000560998 PANO1I0J062 215 aa8.51□□□□□ -1.05
RABGGTA-220ENST00000560998 HRES1P13985 223 aa8.51□□□□□ -1.05
RABGGTA-220ENST00000560998 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
RABGGTA-220ENST00000560998 A0A087X002 238 aa8.5□□□□□ -1.05
RABGGTA-220ENST00000560998 A0A087WTM6 91 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms