RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 DEFB1P60022 68 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 RPL37AP61513 92 aaKnown RBP0.86□□□□□ -2.27
SYNE2-210ENST00000553455 SPINK13Q1W4C9 94 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 CFAP126Q5VTH2 177 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 PRO0255Q9UI72 69 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 HERC1Q15751 4861 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 MYCBP2O75592 4640 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 TRAV12-2A0A075B6T6 113 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 A0A087WWC5 75 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 LOC107984156A0A0G2JMH3 177 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 NBDYA0A0U1RRE5 68 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 UBE2L5PA0A1B0GUS4 154 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 M0R2Z0 102 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 ARMS2P0C7Q2 107 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 POLR2KP53803 58 aaKnown RBP0.85□□□□□ -2.27
SYNE2-210ENST00000553455 CCL18P55774 89 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 S100A10P60903 97 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 LINC01556Q5JQF7 62 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 Q6ZQY7 126 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 BAGE2Q86Y30 109 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 ARL17AQ8IVW1 177 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 NOP10Q9NPE3 64 aaKnown RBP0.85□□□□□ -2.27
SYNE2-210ENST00000553455 MANBALQ9NQG1 85 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 TMEM242Q9NWH2 141 aa0.85□□□□□ -2.27
SYNE2-210ENST00000553455 PAIP2BQ9ULR5 123 aaKnown RBP0.85□□□□□ -2.27
SYNE2-210ENST00000553455 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
SYNE2-210ENST00000553455 TRBV7-3A0A075B6L6 115 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 FXYD6-FXYD2A0A087WZ82 144 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.84□□□□□ -2.27
SYNE2-210ENST00000553455 A0A0D9SG42 100 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 KANTRA0A1W2PQU2 76 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 SMIM27A0A1W2PRY6 76 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 LINC01546A6NGU7 62 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 K7EMI3 77 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 M0QY20 66 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 DEFB4AO15263 64 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 ARPC5O15511 151 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 DEFB130BP0DP73 79 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 DEFB130AP0DP74 79 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 UBE2D3P61077 147 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 PKIAP61925 76 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 UBE2D2P62837 147 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 UBE2L3P68036 154 aaKnown RBP0.84□□□□□ -2.27
SYNE2-210ENST00000553455 RHOHQ15669 191 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 IQCJQ1A5X6 159 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 LELP1Q5T871 98 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 AKAP14Q86UN6 197 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 ATOH7Q8N100 152 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 BRK1Q8WUW1 75 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 SMIM3Q9BZL3 60 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 TMEM191AQ9H0A3 160 aa0.84□□□□□ -2.27
SYNE2-210ENST00000553455 A0A087WTM6 91 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 LY6G6CO95867 125 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 NCR2O95944 276 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 PPP1R17O96001 155 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 EVI2AP22794 236 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 ASIPP42127 132 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 GNG4P50150 75 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 UBE2G1P62253 170 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 Q0VG73 95 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 CLLU1Q5K131 121 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 ENHOQ6UWT2 76 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 Q86TA4 180 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 ATP6V0E2Q8NHE4 81 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 FAM213BQ8TBF2 198 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 TSKUQ8WUA8 353 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 C20orf78Q9BR46 151 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 C10orf95Q9H7T3 257 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 V9GYV3 84 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 HMCN2Q8NDA2 5059 aa0.83□□□□□ -2.28
SYNE2-210ENST00000553455 A0A1B0GUT8 65 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 LINC01549A6NIU2 74 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 I3L3M4 83 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 SFTA3P0C7M3 94 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 HTN1P15515 57 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 PEA15Q15121 130 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 ALKAL2Q6UX46 152 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 WFDC10BQ8IUB3 73 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 SEC11CQ9BY50 192 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 DPH3P1Q9H4G8 78 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 CDC42SE2Q9NRR3 84 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 GNG13Q9P2W3 67 aa0.82□□□□□ -2.28
SYNE2-210ENST00000553455 MUC17Q685J3 4493 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 TRBV25-1A0A075B6N4 114 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 IGHV1-24A0A0C4DH33 117 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 TMEM218A2RU14 115 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 IGIPA6NJ69 53 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 HIGD1CA8MV81 97 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 TSTD3H0UI37 97 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 H3BVH4 76 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 HBDP02042 147 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 S100A8P05109 93 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 RPS28P62857 69 aaKnown RBP0.81□□□□□ -2.28
SYNE2-210ENST00000553455 SPANXN1Q5VSR9 72 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 AP1S3Q96PC3 154 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 AMELXQ99217 191 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 SMIM7Q9BQ49 75 aa0.81□□□□□ -2.28
SYNE2-210ENST00000553455 PLAC8Q9NZF1 115 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms