RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 X6R8D5 127 aa6.68□□□□□ -1.34
SOD2-216ENST00000546260 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
SOD2-216ENST00000546260 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
SOD2-216ENST00000546260 A8MWP4 228 aa6.67□□□□□ -1.34
SOD2-216ENST00000546260 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
SOD2-216ENST00000546260 SMR3AQ99954 134 aa6.67□□□□□ -1.34
SOD2-216ENST00000546260 CSAG1Q6PB30 78 aa6.64□□□□□ -1.35
SOD2-216ENST00000546260 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
SOD2-216ENST00000546260 PRR34Q9NV39 138 aa6.64□□□□□ -1.35
SOD2-216ENST00000546260 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
SOD2-216ENST00000546260 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
SOD2-216ENST00000546260 ACYP2P14621 99 aa6.62□□□□□ -1.35
SOD2-216ENST00000546260 IGLV1-50A0A075B6I6 118 aa6.62□□□□□ -1.35
SOD2-216ENST00000546260 C15orf56Q8N910 161 aa6.62□□□□□ -1.35
SOD2-216ENST00000546260 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
SOD2-216ENST00000546260 APCP25054 2843 aa6.62□□□□□ -1.35
SOD2-216ENST00000546260 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
SOD2-216ENST00000546260 INAFM1C9JVW0 142 aa6.6□□□□□ -1.35
SOD2-216ENST00000546260 HRES1P13985 223 aa6.6□□□□□ -1.35
SOD2-216ENST00000546260 TEX15Q9BXT5 2789 aa6.6□□□□□ -1.35
SOD2-216ENST00000546260 UQCR11O14957 56 aa6.6□□□□□ -1.35
SOD2-216ENST00000546260 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
SOD2-216ENST00000546260 HRNRQ86YZ3 2850 aaPredicted RBP6.59□□□□□ -1.35
SOD2-216ENST00000546260 C1orf134Q5TEV5 83 aa6.59□□□□□ -1.35
SOD2-216ENST00000546260 SPINK1P00995 79 aa6.58□□□□□ -1.36
SOD2-216ENST00000546260 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
SOD2-216ENST00000546260 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
SOD2-216ENST00000546260 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
SOD2-216ENST00000546260 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
SOD2-216ENST00000546260 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
SOD2-216ENST00000546260 NBEAL1Q6ZS30 2694 aa6.55□□□□□ -1.36
SOD2-216ENST00000546260 TNP2Q05952 138 aa6.54□□□□□ -1.36
SOD2-216ENST00000546260 NOTCH1P46531 2555 aa6.53□□□□□ -1.36
SOD2-216ENST00000546260 ZANQ9Y493 2812 aa6.53□□□□□ -1.36
SOD2-216ENST00000546260 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
SOD2-216ENST00000546260 UTP20O75691 2785 aaKnown RBP6.53□□□□□ -1.36
SOD2-216ENST00000546260 KRTAP29-1A8MX34 341 aaPredicted RBP6.52□□□□□ -1.37
SOD2-216ENST00000546260 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
SOD2-216ENST00000546260 CRYBG3Q68DQ2 2970 aa6.52□□□□□ -1.37
SOD2-216ENST00000546260 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
SOD2-216ENST00000546260 STAB1Q9NY15 2570 aa6.51□□□□□ -1.37
SOD2-216ENST00000546260 MRPL34Q9BQ48 92 aaKnown RBP6.51□□□□□ -1.37
SOD2-216ENST00000546260 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
SOD2-216ENST00000546260 FBN2P35556 2912 aa6.5□□□□□ -1.37
SOD2-216ENST00000546260 NF1P21359 2839 aa6.49□□□□□ -1.37
SOD2-216ENST00000546260 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
SOD2-216ENST00000546260 COL6A5A8TX70 2615 aa6.47□□□□□ -1.37
SOD2-216ENST00000546260 K7ERS5 55 aa6.47□□□□□ -1.37
SOD2-216ENST00000546260 LINC01556Q5JQF7 62 aa6.47□□□□□ -1.37
SOD2-216ENST00000546260 ITPR2Q14571 2701 aa6.46□□□□□ -1.38
SOD2-216ENST00000546260 OXLD1Q5BKU9 147 aa6.45□□□□□ -1.38
SOD2-216ENST00000546260 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
SOD2-216ENST00000546260 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
SOD2-216ENST00000546260 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
SOD2-216ENST00000546260 CASC10Q5T4H9 136 aa6.44□□□□□ -1.38
SOD2-216ENST00000546260 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
SOD2-216ENST00000546260 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
SOD2-216ENST00000546260 A0A1B0GVX0 72 aa6.43□□□□□ -1.38
SOD2-216ENST00000546260 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SOD2-216ENST00000546260 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
SOD2-216ENST00000546260 CHTF8P0CG12 524 aa6.43□□□□□ -1.38
SOD2-216ENST00000546260 PLA2G2DQ9UNK4 145 aa6.43□□□□□ -1.38
SOD2-216ENST00000546260 CSMD2Q7Z408 3487 aa6.42□□□□□ -1.38
SOD2-216ENST00000546260 Q6ZR54 194 aa6.41□□□□□ -1.38
SOD2-216ENST00000546260 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.38
SOD2-216ENST00000546260 K7EIL1 84 aa6.4□□□□□ -1.38
SOD2-216ENST00000546260 CRIPTQ9P021 101 aa6.4□□□□□ -1.38
SOD2-216ENST00000546260 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.39
SOD2-216ENST00000546260 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.39
SOD2-216ENST00000546260 CELSR2Q9HCU4 2923 aa6.39□□□□□ -1.39
SOD2-216ENST00000546260 RTL8CO15255 209 aa6.39□□□□□ -1.39
SOD2-216ENST00000546260 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
SOD2-216ENST00000546260 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
SOD2-216ENST00000546260 NIPBLQ6KC79 2804 aaeCLIP6.36□□□□□ -1.39
SOD2-216ENST00000546260 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
SOD2-216ENST00000546260 NSD1Q96L73 2696 aaPredicted RBP6.35□□□□□ -1.39
SOD2-216ENST00000546260 MXRA5Q9NR99 2828 aa6.35□□□□□ -1.39
SOD2-216ENST00000546260 H3BNG1 76 aa6.33□□□□□ -1.4
SOD2-216ENST00000546260 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
SOD2-216ENST00000546260 C14orf177Q52M58 125 aa6.32□□□□□ -1.4
SOD2-216ENST00000546260 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
SOD2-216ENST00000546260 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
SOD2-216ENST00000546260 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
SOD2-216ENST00000546260 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
SOD2-216ENST00000546260 ROMO1P60602 79 aa6.29□□□□□ -1.4
SOD2-216ENST00000546260 HIVEP1P15822 2718 aa6.27□□□□□ -1.4
SOD2-216ENST00000546260 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
SOD2-216ENST00000546260 A0A087X002 238 aa6.26□□□□□ -1.41
SOD2-216ENST00000546260 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
SOD2-216ENST00000546260 Q5W150 140 aa6.25□□□□□ -1.41
SOD2-216ENST00000546260 KRTAP10-3P60369 221 aa6.24□□□□□ -1.41
SOD2-216ENST00000546260 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
SOD2-216ENST00000546260 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
SOD2-216ENST00000546260 Q8N1X5 172 aa6.23□□□□□ -1.41
SOD2-216ENST00000546260 ZNF861PO60384 105 aa6.21□□□□□ -1.42
SOD2-216ENST00000546260 SPRR1BP22528 89 aa6.2□□□□□ -1.42
SOD2-216ENST00000546260 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
SOD2-216ENST00000546260 KRTAP1-3Q8IUG1 177 aa6.16□□□□□ -1.42
SOD2-216ENST00000546260 A0A1B0GU33 70 aa6.15□□□□□ -1.43
SOD2-216ENST00000546260 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms