RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
CLIP1-218ENST00000545889 BCE1O60756 84 aa5.77□□□□□ -1.49
CLIP1-218ENST00000545889 A0A087WTM6 91 aa5.76□□□□□ -1.49
CLIP1-218ENST00000545889 A8MUN3 132 aa5.76□□□□□ -1.49
CLIP1-218ENST00000545889 PRR15Q8IV56 129 aa5.75□□□□□ -1.49
CLIP1-218ENST00000545889 RBM12B-AS1Q9P1G2 102 aa5.75□□□□□ -1.49
CLIP1-218ENST00000545889 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-218ENST00000545889 CUBNO60494 3623 aa5.74□□□□□ -1.49
CLIP1-218ENST00000545889 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
CLIP1-218ENST00000545889 H0Y9P7 68 aa5.73□□□□□ -1.49
CLIP1-218ENST00000545889 H3BS24 57 aa5.73□□□□□ -1.49
CLIP1-218ENST00000545889 LINC00313P59037 77 aa5.73□□□□□ -1.49
CLIP1-218ENST00000545889 Q96NJ1 140 aa5.73□□□□□ -1.49
CLIP1-218ENST00000545889 IGLV5-39A0A0G2JS06 123 aa5.73□□□□□ -1.49
CLIP1-218ENST00000545889 VWFP04275 2813 aa5.72□□□□□ -1.49
CLIP1-218ENST00000545889 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
CLIP1-218ENST00000545889 LINC00476Q8WZB0 136 aa5.71□□□□□ -1.49
CLIP1-218ENST00000545889 Q6ZRX8 168 aa5.71□□□□□ -1.5
CLIP1-218ENST00000545889 C7orf65Q6ZTY9 151 aa5.71□□□□□ -1.5
CLIP1-218ENST00000545889 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
CLIP1-218ENST00000545889 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
CLIP1-218ENST00000545889 LINC00528Q8N1L1 170 aa5.7□□□□□ -1.5
CLIP1-218ENST00000545889 VPS13CQ709C8 3753 aa5.7□□□□□ -1.5
CLIP1-218ENST00000545889 FBN1P35555 2871 aaKnown RBP5.7□□□□□ -1.5
CLIP1-218ENST00000545889 C9orf163Q8N9P6 203 aa5.7□□□□□ -1.5
CLIP1-218ENST00000545889 CXCL6P80162 114 aa5.69□□□□□ -1.5
CLIP1-218ENST00000545889 C1orf64Q8NEQ6 169 aa5.69□□□□□ -1.5
CLIP1-218ENST00000545889 APLNQ9ULZ1 77 aa5.68□□□□□ -1.5
CLIP1-218ENST00000545889 ZNF861PO60384 105 aa5.68□□□□□ -1.5
CLIP1-218ENST00000545889 CASC10Q5T4H9 136 aa5.68□□□□□ -1.5
CLIP1-218ENST00000545889 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
CLIP1-218ENST00000545889 Q6ZQT0 140 aa5.67□□□□□ -1.5
CLIP1-218ENST00000545889 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
CLIP1-218ENST00000545889 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
CLIP1-218ENST00000545889 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
CLIP1-218ENST00000545889 LINC00612Q8N6U2 182 aa5.66□□□□□ -1.5
CLIP1-218ENST00000545889 FAM168BA1KXE4 195 aa5.66□□□□□ -1.5
CLIP1-218ENST00000545889 ELOF1P60002 83 aaKnown RBP5.65□□□□□ -1.5
CLIP1-218ENST00000545889 TNP2Q05952 138 aa5.65□□□□□ -1.51
CLIP1-218ENST00000545889 SMIM29Q86T20 159 aa5.65□□□□□ -1.51
CLIP1-218ENST00000545889 TRBV7-4A0A0J9YYF1 115 aa5.65□□□□□ -1.51
CLIP1-218ENST00000545889 IGLV5-45A0A087WSX0 123 aa5.64□□□□□ -1.51
CLIP1-218ENST00000545889 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
CLIP1-218ENST00000545889 OBSCN-AS1Q96MR7 158 aa5.63□□□□□ -1.51
CLIP1-218ENST00000545889 ZNF469Q96JG9 3925 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-218ENST00000545889 VPREB1P12018 145 aa5.62□□□□□ -1.51
CLIP1-218ENST00000545889 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
CLIP1-218ENST00000545889 C8orf87E5RJ46 101 aa5.61□□□□□ -1.51
CLIP1-218ENST00000545889 M0R2T5 61 aa5.61□□□□□ -1.51
CLIP1-218ENST00000545889 A0A1B0GW54 56 aa5.6□□□□□ -1.51
CLIP1-218ENST00000545889 IGLV5-37A0A075B6J1 123 aa5.6□□□□□ -1.51
CLIP1-218ENST00000545889 PRR34Q9NV39 138 aa5.6□□□□□ -1.51
CLIP1-218ENST00000545889 TENM3Q9P273 2699 aa5.6□□□□□ -1.51
CLIP1-218ENST00000545889 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
CLIP1-218ENST00000545889 ACYP2P14621 99 aa5.59□□□□□ -1.51
CLIP1-218ENST00000545889 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
CLIP1-218ENST00000545889 A8MU10 97 aa5.59□□□□□ -1.51
CLIP1-218ENST00000545889 Q1T7F1 81 aa5.59□□□□□ -1.51
CLIP1-218ENST00000545889 ANAPC11Q9NYG5 84 aa5.59□□□□□ -1.51
CLIP1-218ENST00000545889 LOC110117498A0A087WWA1 95 aa5.58□□□□□ -1.52
CLIP1-218ENST00000545889 FAM104AQ969W3 186 aa5.58□□□□□ -1.52
CLIP1-218ENST00000545889 ANK3Q12955 4377 aaKnown RBP5.58□□□□□ -1.52
CLIP1-218ENST00000545889 ERC2-IT1O76042 136 aa5.58□□□□□ -1.52
CLIP1-218ENST00000545889 PKD1L1Q8TDX9 2849 aa5.57□□□□□ -1.52
CLIP1-218ENST00000545889 C15orf56Q8N910 161 aa5.57□□□□□ -1.52
CLIP1-218ENST00000545889 LCA10Q71F78 164 aa5.57□□□□□ -1.52
CLIP1-218ENST00000545889 A0A1B0GU69 56 aa5.55□□□□□ -1.52
CLIP1-218ENST00000545889 Q6ZSA8 131 aa5.55□□□□□ -1.52
CLIP1-218ENST00000545889 KCNQ1DNQ9H478 68 aa5.55□□□□□ -1.52
CLIP1-218ENST00000545889 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
CLIP1-218ENST00000545889 DSCR10P59022 87 aa5.54□□□□□ -1.52
CLIP1-218ENST00000545889 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
CLIP1-218ENST00000545889 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
CLIP1-218ENST00000545889 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
CLIP1-218ENST00000545889 A0A1W2PNN7 141 aa5.53□□□□□ -1.52
CLIP1-218ENST00000545889 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
CLIP1-218ENST00000545889 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
CLIP1-218ENST00000545889 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
CLIP1-218ENST00000545889 LCE6AA0A183 80 aa5.52□□□□□ -1.53
CLIP1-218ENST00000545889 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
CLIP1-218ENST00000545889 A8MWP4 228 aa5.51□□□□□ -1.53
CLIP1-218ENST00000545889 Q5VV11 94 aa5.51□□□□□ -1.53
CLIP1-218ENST00000545889 IGLV8-61A0A075B6I0 122 aa5.51□□□□□ -1.53
CLIP1-218ENST00000545889 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
CLIP1-218ENST00000545889 PRR26Q8N8Z3 221 aa5.5□□□□□ -1.53
CLIP1-218ENST00000545889 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
CLIP1-218ENST00000545889 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
CLIP1-218ENST00000545889 CYP4F30PQ9H0H9 118 aa5.49□□□□□ -1.53
CLIP1-218ENST00000545889 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
CLIP1-218ENST00000545889 H3BPC8 53 aa5.48□□□□□ -1.53
CLIP1-218ENST00000545889 TGP01266 2768 aa5.48□□□□□ -1.53
CLIP1-218ENST00000545889 C8orf17Q9NRJ1 99 aa5.46□□□□□ -1.53
CLIP1-218ENST00000545889 K7EQZ3 153 aa5.46□□□□□ -1.54
CLIP1-218ENST00000545889 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
CLIP1-218ENST00000545889 PLA2G2DQ9UNK4 145 aa5.46□□□□□ -1.54
CLIP1-218ENST00000545889 AKAP9Q99996 3911 aa5.45□□□□□ -1.54
CLIP1-218ENST00000545889 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
CLIP1-218ENST00000545889 A0A0G2JQZ4 141 aa5.44□□□□□ -1.54
CLIP1-218ENST00000545889 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-218ENST00000545889 Q5VSD8 79 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms