RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 NUPR2A6NF83 97 aa14.67□□□□□ -0.06
FOXA1-202ENST00000545425 APLNQ9ULZ1 77 aa14.66□□□□□ -0.06
FOXA1-202ENST00000545425 RYR3Q15413 4870 aa14.65□□□□□ -0.06
FOXA1-202ENST00000545425 STARD9Q9P2P6 4700 aa14.65□□□□□ -0.06
FOXA1-202ENST00000545425 C5orf47Q569G3 176 aa14.64□□□□□ -0.07
FOXA1-202ENST00000545425 SPRR1BP22528 89 aa14.64□□□□□ -0.07
FOXA1-202ENST00000545425 KRTAP1-5Q9BYS1 174 aa14.64□□□□□ -0.07
FOXA1-202ENST00000545425 LINC00474Q9P2X8 69 aa14.62□□□□□ -0.07
FOXA1-202ENST00000545425 DYNC2H1Q8NCM8 4307 aaKnown RBP14.62□□□□□ -0.07
FOXA1-202ENST00000545425 A0A1W2PNN7 141 aa14.62□□□□□ -0.07
FOXA1-202ENST00000545425 DSCR10P59022 87 aa14.62□□□□□ -0.07
FOXA1-202ENST00000545425 IGFL1Q6UW32 110 aa14.6□□□□□ -0.07
FOXA1-202ENST00000545425 IGKV2-24A0A0C4DH68 120 aa14.59□□□□□ -0.07
FOXA1-202ENST00000545425 SMIM26A0A096LP01 95 aa14.58□□□□□ -0.08
FOXA1-202ENST00000545425 Q5XG85 94 aa14.57□□□□□ -0.08
FOXA1-202ENST00000545425 C9orf163Q8N9P6 203 aa14.57□□□□□ -0.08
FOXA1-202ENST00000545425 UBE2AP49459 152 aa14.55□□□□□ -0.08
FOXA1-202ENST00000545425 PRLHP81277 87 aa14.55□□□□□ -0.08
FOXA1-202ENST00000545425 HIGD2AQ9BW72 106 aa14.54□□□□□ -0.08
FOXA1-202ENST00000545425 SACSQ9NZJ4 4579 aa14.53□□□□□ -0.08
FOXA1-202ENST00000545425 HCG22E2RYF7 251 aa14.53□□□□□ -0.08
FOXA1-202ENST00000545425 RYR2Q92736 4967 aa14.52□□□□□ -0.08
FOXA1-202ENST00000545425 K7EQZ3 153 aa14.52□□□□□ -0.09
FOXA1-202ENST00000545425 LYSTQ99698 3801 aa14.49□□□□□ -0.09
FOXA1-202ENST00000545425 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.49□□□□□ -0.09
FOXA1-202ENST00000545425 LRCOL1A6NCL2 159 aa14.48□□□□□ -0.09
FOXA1-202ENST00000545425 LY6G6CO95867 125 aa14.48□□□□□ -0.09
FOXA1-202ENST00000545425 FAM30AQ9NZY2 134 aa14.48□□□□□ -0.09
FOXA1-202ENST00000545425 NBDYA0A0U1RRE5 68 aa14.47□□□□□ -0.09
FOXA1-202ENST00000545425 PLECQ15149 4684 aaKnown RBP14.46□□□□□ -0.1
FOXA1-202ENST00000545425 PHF5AQ7RTV0 110 aaKnown RBP14.45□□□□□ -0.1
FOXA1-202ENST00000545425 A0A087WSZ3 146 aa14.45□□□□□ -0.1
FOXA1-202ENST00000545425 ZCCHC13Q8WW36 166 aaKnown RBP14.43□□□□□ -0.1
FOXA1-202ENST00000545425 C4orf26Q17RF5 130 aa14.42□□□□□ -0.1
FOXA1-202ENST00000545425 ALMS1Q8TCU4 4167 aa14.4□□□□□ -0.1
FOXA1-202ENST00000545425 NDUFB1O75438 58 aa14.38□□□□□ -0.11
FOXA1-202ENST00000545425 CHTF8P0CG12 524 aa14.38□□□□□ -0.11
FOXA1-202ENST00000545425 Q6ZRN7 208 aaPredicted RBP14.38□□□□□ -0.11
FOXA1-202ENST00000545425 RPL37AP61513 92 aaKnown RBP14.38□□□□□ -0.11
FOXA1-202ENST00000545425 KRTAP13-1Q8IUC0 172 aa14.37□□□□□ -0.11
FOXA1-202ENST00000545425 H3BPC8 53 aa14.36□□□□□ -0.11
FOXA1-202ENST00000545425 KRTAP11-1Q8IUC1 163 aa14.35□□□□□ -0.11
FOXA1-202ENST00000545425 HRCT1Q6UXD1 115 aa14.34□□□□□ -0.11
FOXA1-202ENST00000545425 HYDINQ4G0P3 5121 aa14.34□□□□□ -0.11
FOXA1-202ENST00000545425 A8MWP4 228 aa14.34□□□□□ -0.11
FOXA1-202ENST00000545425 MP68P56378 58 aa14.34□□□□□ -0.11
FOXA1-202ENST00000545425 PRR15Q8IV56 129 aa14.33□□□□□ -0.12
FOXA1-202ENST00000545425 KRTAP29-1A8MX34 341 aaPredicted RBP14.32□□□□□ -0.12
FOXA1-202ENST00000545425 FP248Q71RG6 208 aaPredicted RBP14.32□□□□□ -0.12
FOXA1-202ENST00000545425 LINC00472Q9H8W2 130 aa14.32□□□□□ -0.12
FOXA1-202ENST00000545425 SPACA4Q8TDM5 124 aa14.3□□□□□ -0.12
FOXA1-202ENST00000545425 A0A0G2JQZ4 141 aa14.29□□□□□ -0.12
FOXA1-202ENST00000545425 CYP4F30PQ9H0H9 118 aa14.28□□□□□ -0.12
FOXA1-202ENST00000545425 ZNF706Q9Y5V0 76 aaPredicted RBP14.28□□□□□ -0.12
FOXA1-202ENST00000545425 CASC2Q6XLA1 102 aa14.26□□□□□ -0.13
FOXA1-202ENST00000545425 LINC00483Q53H64 154 aa14.25□□□□□ -0.13
FOXA1-202ENST00000545425 WFDC13Q8IUB5 93 aa14.25□□□□□ -0.13
FOXA1-202ENST00000545425 hDV103S1A0JD37 113 aa14.23□□□□□ -0.13
FOXA1-202ENST00000545425 DEFB116Q30KQ4 102 aa14.22□□□□□ -0.13
FOXA1-202ENST00000545425 A0A087WTM6 91 aa14.19□□□□□ -0.14
FOXA1-202ENST00000545425 KMT2AQ03164 3969 aa14.19□□□□□ -0.14
FOXA1-202ENST00000545425 VPS13DQ5THJ4 4388 aa14.19□□□□□ -0.14
FOXA1-202ENST00000545425 TRAV22A0A0B4J277 110 aa14.18□□□□□ -0.14
FOXA1-202ENST00000545425 PANO1I0J062 215 aa14.17□□□□□ -0.14
FOXA1-202ENST00000545425 SPANXA2-OT1Q8N9U9 137 aa14.17□□□□□ -0.14
FOXA1-202ENST00000545425 EPPK1P58107 5090 aaKnown RBP14.16□□□□□ -0.14
FOXA1-202ENST00000545425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.15□□□□□ -0.14
FOXA1-202ENST00000545425 H0Y9P7 68 aa14.12□□□□□ -0.15
FOXA1-202ENST00000545425 MOBPQ13875 183 aa14.12□□□□□ -0.15
FOXA1-202ENST00000545425 FAM229BQ4G0N7 80 aa14.11□□□□□ -0.15
FOXA1-202ENST00000545425 C1orf64Q8NEQ6 169 aa14.11□□□□□ -0.15
FOXA1-202ENST00000545425 PLAC8Q9NZF1 115 aa14.11□□□□□ -0.15
FOXA1-202ENST00000545425 PRO0628Q9UI54 55 aa14.11□□□□□ -0.15
FOXA1-202ENST00000545425 DNAH10Q8IVF4 4471 aa14.11□□□□□ -0.15
FOXA1-202ENST00000545425 TP53AIP1Q9HCN2 124 aa14.11□□□□□ -0.15
FOXA1-202ENST00000545425 MMP24-AS1A0A0U1RRL7 71 aa14.1□□□□□ -0.15
FOXA1-202ENST00000545425 LINC00208Q96KT6 92 aa14.1□□□□□ -0.15
FOXA1-202ENST00000545425 IGLV5-52A0A0A0MRZ9 124 aa14.09□□□□□ -0.15
FOXA1-202ENST00000545425 RTL8CO15255 209 aa14.08□□□□□ -0.15
FOXA1-202ENST00000545425 Q6ZR54 194 aa14.08□□□□□ -0.16
FOXA1-202ENST00000545425 ASB16-AS1Q495Z4 193 aa14.07□□□□□ -0.16
FOXA1-202ENST00000545425 Q1T7F1 81 aa14.06□□□□□ -0.16
FOXA1-202ENST00000545425 LINC00336Q6ZUF6 198 aa14.06□□□□□ -0.16
FOXA1-202ENST00000545425 DNAH6Q9C0G6 4158 aa14.04□□□□□ -0.16
FOXA1-202ENST00000545425 ZNF861PO60384 105 aa14.04□□□□□ -0.16
FOXA1-202ENST00000545425 Q96NJ1 140 aa14.04□□□□□ -0.16
FOXA1-202ENST00000545425 IGLV9-49A0A0B4J1Y8 123 aa14.04□□□□□ -0.16
FOXA1-202ENST00000545425 BIRC6Q9NR09 4857 aa14.03□□□□□ -0.16
FOXA1-202ENST00000545425 V9GYY9 64 aa14.02□□□□□ -0.16
FOXA1-202ENST00000545425 PSORS1C2Q9UIG4 136 aa14.01□□□□□ -0.17
FOXA1-202ENST00000545425 MPLKIPQ8TAP9 179 aa14□□□□□ -0.17
FOXA1-202ENST00000545425 FRAS1Q86XX4 4008 aa13.98□□□□□ -0.17
FOXA1-202ENST00000545425 C8orf17Q9NRJ1 99 aa13.97□□□□□ -0.17
FOXA1-202ENST00000545425 CDK2AP2O75956 126 aa13.97□□□□□ -0.17
FOXA1-202ENST00000545425 C1orf134Q5TEV5 83 aa13.97□□□□□ -0.17
FOXA1-202ENST00000545425 A0A1B0GVX0 72 aa13.95□□□□□ -0.18
FOXA1-202ENST00000545425 CD164Q04900 197 aa13.91□□□□□ -0.18
FOXA1-202ENST00000545425 DNAH2Q9P225 4427 aa13.91□□□□□ -0.18
FOXA1-202ENST00000545425 C1orf195Q5TG92 126 aa13.88□□□□□ -0.19
FOXA1-202ENST00000545425 IGLV7-46A0A075B6I9 117 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms