RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
CPSF7-220ENST00000541963 TEX49A0A1B0GTD5 131 aa3.38□□□□□ -1.87
CPSF7-220ENST00000541963 TMEM223A0PJW6 202 aa3.38□□□□□ -1.87
CPSF7-220ENST00000541963 IGIPA6NJ69 53 aa3.38□□□□□ -1.87
CPSF7-220ENST00000541963 RPL37AP61513 92 aaKnown RBP3.38□□□□□ -1.87
CPSF7-220ENST00000541963 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
CPSF7-220ENST00000541963 C7orf33Q8WU49 177 aa3.38□□□□□ -1.87
CPSF7-220ENST00000541963 V9GYY9 64 aa3.38□□□□□ -1.87
CPSF7-220ENST00000541963 FAT1Q14517 4588 aa3.38□□□□□ -1.87
CPSF7-220ENST00000541963 IGHV3OR16-9A0A0B4J2B5 98 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 IGKV2-24A0A0C4DH68 120 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 LOC107984640A0A0U1RRK4 108 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 Q6JHZ5 121 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 PLAC8Q9NZF1 115 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 LAMTOR3Q9UHA4 124 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
CPSF7-220ENST00000541963 TRBV10-3A0A0K0K1G6 114 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 hADV29S1A0JD25 119 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 NDUFA1O15239 70 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 NDUFC1O43677 76 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 DNAL4O96015 105 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 SFTA2Q6UW10 78 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 Q6ZRU5 148 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 AMELXQ99217 191 aa3.36□□□□□ -1.87
CPSF7-220ENST00000541963 A0A096LNI7 61 aa3.35□□□□□ -1.87
CPSF7-220ENST00000541963 H3BQ85 93 aa3.35□□□□□ -1.87
CPSF7-220ENST00000541963 PANO1I0J062 215 aa3.35□□□□□ -1.87
CPSF7-220ENST00000541963 NPC2P61916 151 aa3.35□□□□□ -1.87
CPSF7-220ENST00000541963 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
CPSF7-220ENST00000541963 MUSTN1Q8IVN3 82 aa3.35□□□□□ -1.87
CPSF7-220ENST00000541963 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.87
CPSF7-220ENST00000541963 TRAV13-2A0A0B4J235 113 aa3.34□□□□□ -1.87
CPSF7-220ENST00000541963 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
CPSF7-220ENST00000541963 H0YGX0 51 aa3.34□□□□□ -1.87
CPSF7-220ENST00000541963 OXTP01178 125 aa3.34□□□□□ -1.87
CPSF7-220ENST00000541963 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
CPSF7-220ENST00000541963 TLX1NBP0CAT3 122 aa3.33□□□□□ -1.88
CPSF7-220ENST00000541963 UNQ6190/PRO20217Q6UXQ8 127 aa3.33□□□□□ -1.88
CPSF7-220ENST00000541963 Q8IZM0 81 aa3.33□□□□□ -1.88
CPSF7-220ENST00000541963 TOMM7Q9P0U1 55 aa3.33□□□□□ -1.88
CPSF7-220ENST00000541963 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
CPSF7-220ENST00000541963 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
CPSF7-220ENST00000541963 A0A0J9YXV3 536 aa3.32□□□□□ -1.88
CPSF7-220ENST00000541963 JMJD7-PLA2G4BH0Y9G9 81 aa3.32□□□□□ -1.88
CPSF7-220ENST00000541963 KRTAP10-4P60372 401 aaPredicted RBP3.32□□□□□ -1.88
CPSF7-220ENST00000541963 KIAA0087Q14695 138 aa3.32□□□□□ -1.88
CPSF7-220ENST00000541963 C9orf116Q5BN46 136 aaPredicted RBP3.32□□□□□ -1.88
CPSF7-220ENST00000541963 C6orf48Q9UBA6 75 aa3.32□□□□□ -1.88
CPSF7-220ENST00000541963 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
CPSF7-220ENST00000541963 H7C2G1 150 aa3.31□□□□□ -1.88
CPSF7-220ENST00000541963 TSPEAR-AS2P59090 65 aa3.31□□□□□ -1.88
CPSF7-220ENST00000541963 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 A0A1W2PNN7 141 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 A8MU10 97 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 BAALC-AS2P0C853 105 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 PDE6GP18545 87 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 RPL28P46779 137 aaKnown RBP3.3□□□□□ -1.88
CPSF7-220ENST00000541963 PRR3P79522 188 aaKnown RBP3.3□□□□□ -1.88
CPSF7-220ENST00000541963 SPINK6Q6UWN8 80 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 OBSCN-AS1Q96MR7 158 aa3.3□□□□□ -1.88
CPSF7-220ENST00000541963 PFN2P35080 140 aa3.29□□□□□ -1.88
CPSF7-220ENST00000541963 UBE2BP63146 152 aa3.29□□□□□ -1.88
CPSF7-220ENST00000541963 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
CPSF7-220ENST00000541963 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
CPSF7-220ENST00000541963 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 C1orf137Q5JT78 98 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 NKAPP1Q8N9T2 125 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 UBL5Q9BZL1 73 aa3.28□□□□□ -1.88
CPSF7-220ENST00000541963 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 H0Y9J4 135 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CPSF7-220ENST00000541963 COX17Q14061 63 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 Q5XG85 94 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 PSORS1C2Q9UIG4 136 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
CPSF7-220ENST00000541963 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 TMEM256-PLSCR3K7ERE1 68 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 IGLV7-43P04211 117 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 CCKP06307 115 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 KRTAP1-4P0C5Y4 121 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 DIRC1Q969H9 104 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 XAGE1AQ9HD64 81 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 ORMDL1Q9P0S3 153 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 C22orf24Q9Y442 160 aa3.26□□□□□ -1.89
CPSF7-220ENST00000541963 SRRM2Q9UQ35 2752 aaKnown RBP3.26□□□□□ -1.89
CPSF7-220ENST00000541963 MRPL55Q7Z7F7 128 aaKnown RBP3.25□□□□□ -1.89
CPSF7-220ENST00000541963 FLG2Q5D862 2391 aaPredicted RBP3.24□□□□□ -1.89
CPSF7-220ENST00000541963 LINC00158P58513 81 aa3.24□□□□□ -1.89
CPSF7-220ENST00000541963 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms