RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZNF815PA8K554 130 aa5□□□□□ -1.61
YBX3-211ENST00000541351 CCDC179H3BU77 68 aa5□□□□□ -1.61
YBX3-211ENST00000541351 LCE2BO14633 110 aa5□□□□□ -1.61
YBX3-211ENST00000541351 IGLV6-57P01721 117 aa5□□□□□ -1.61
YBX3-211ENST00000541351 RPL39P62891 51 aaKnown RBP5□□□□□ -1.61
YBX3-211ENST00000541351 MOBPQ13875 183 aa5□□□□□ -1.61
YBX3-211ENST00000541351 C5orf47Q569G3 176 aa5□□□□□ -1.61
YBX3-211ENST00000541351 SCGB1D4Q6XE38 83 aa5□□□□□ -1.61
YBX3-211ENST00000541351 NRACQ8N912 160 aa5□□□□□ -1.61
YBX3-211ENST00000541351 TOMM6Q96B49 74 aa5□□□□□ -1.61
YBX3-211ENST00000541351 IMUPQ9GZP8 106 aa5□□□□□ -1.61
YBX3-211ENST00000541351 PRO1854Q9UHT4 67 aa5□□□□□ -1.61
YBX3-211ENST00000541351 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 TRBV7-7A0A0K0K1E9 115 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 M0R378 163 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 ATXN8Q156A1 80 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 MEIG1Q5JSS6 88 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
YBX3-211ENST00000541351 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
YBX3-211ENST00000541351 TRBV10-2A0A0K0K1G8 114 aa4.98□□□□□ -1.61
YBX3-211ENST00000541351 A0A1B0GX51 115 aa4.98□□□□□ -1.61
YBX3-211ENST00000541351 H3BT86 120 aa4.98□□□□□ -1.61
YBX3-211ENST00000541351 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
YBX3-211ENST00000541351 TMEM141Q96I45 108 aa4.98□□□□□ -1.61
YBX3-211ENST00000541351 C9JAW5 83 aa4.97□□□□□ -1.61
YBX3-211ENST00000541351 ACYP1P07311 99 aa4.97□□□□□ -1.61
YBX3-211ENST00000541351 LINC00483Q53H64 154 aa4.97□□□□□ -1.61
YBX3-211ENST00000541351 TMEM170BQ5T4T1 132 aa4.97□□□□□ -1.61
YBX3-211ENST00000541351 PYGO1Q9Y3Y4 419 aa4.97□□□□□ -1.61
YBX3-211ENST00000541351 NEBP20929 6669 aa4.96□□□□□ -1.62
YBX3-211ENST00000541351 C11orf86A6NJI1 115 aa4.96□□□□□ -1.62
YBX3-211ENST00000541351 RPS28P62857 69 aaKnown RBP4.96□□□□□ -1.62
YBX3-211ENST00000541351 FAM19A3Q7Z5A8 133 aa4.96□□□□□ -1.62
YBX3-211ENST00000541351 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
YBX3-211ENST00000541351 HERVK_113P63121 156 aa4.95□□□□□ -1.62
YBX3-211ENST00000541351 FAM104AQ969W3 186 aa4.95□□□□□ -1.62
YBX3-211ENST00000541351 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
YBX3-211ENST00000541351 J3KT08 172 aa4.94□□□□□ -1.62
YBX3-211ENST00000541351 UQCRQO14949 82 aa4.94□□□□□ -1.62
YBX3-211ENST00000541351 GAGE2AQ6NT46 116 aa4.94□□□□□ -1.62
YBX3-211ENST00000541351 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 MT2AP02795 61 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 COX6CP09669 75 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 LGALS3P17931 250 aaKnown RBP4.93□□□□□ -1.62
YBX3-211ENST00000541351 PMVKQ15126 192 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 C2orf66Q6UXQ4 117 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 OR13C6PQ8NH95 151 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
YBX3-211ENST00000541351 LEPROTO15243 131 aa4.92□□□□□ -1.62
YBX3-211ENST00000541351 C9orf153Q5TBE3 101 aa4.92□□□□□ -1.62
YBX3-211ENST00000541351 SMCR5Q8TEV8 140 aa4.92□□□□□ -1.62
YBX3-211ENST00000541351 A4D1N5 150 aa4.91□□□□□ -1.62
YBX3-211ENST00000541351 J3QQQ9 107 aa4.91□□□□□ -1.62
YBX3-211ENST00000541351 VPREB1P12018 145 aa4.91□□□□□ -1.62
YBX3-211ENST00000541351 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
YBX3-211ENST00000541351 AMELXQ99217 191 aa4.91□□□□□ -1.62
YBX3-211ENST00000541351 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
YBX3-211ENST00000541351 Q1RN00 199 aa4.9□□□□□ -1.63
YBX3-211ENST00000541351 SFTA2Q6UW10 78 aa4.9□□□□□ -1.63
YBX3-211ENST00000541351 COX7B2Q8TF08 81 aa4.9□□□□□ -1.63
YBX3-211ENST00000541351 TEX49A0A1B0GTD5 131 aa4.89□□□□□ -1.63
YBX3-211ENST00000541351 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
YBX3-211ENST00000541351 PRYO14603 147 aa4.89□□□□□ -1.63
YBX3-211ENST00000541351 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
YBX3-211ENST00000541351 LST1O00453 97 aa4.88□□□□□ -1.63
YBX3-211ENST00000541351 MT1FP04733 61 aa4.88□□□□□ -1.63
YBX3-211ENST00000541351 COX7CP15954 63 aa4.88□□□□□ -1.63
YBX3-211ENST00000541351 ATP11AUNQ6ZP68 121 aa4.88□□□□□ -1.63
YBX3-211ENST00000541351 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
YBX3-211ENST00000541351 FAM236AA0A1B0GUQ0 79 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 FAM236BA0A1B0GV22 79 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 ATOX1O00244 68 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 TRIAP1O43715 76 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 TIMM17BO60830 172 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 TMEM258P61165 79 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 COX17Q14061 63 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 C6orf99Q4VX62 202 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 MUSTN1Q8IVN3 82 aa4.87□□□□□ -1.63
YBX3-211ENST00000541351 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
YBX3-211ENST00000541351 PFN2P35080 140 aa4.86□□□□□ -1.63
YBX3-211ENST00000541351 HIST1H4AP62805 103 aaKnown RBP4.85□□□□□ -1.63
YBX3-211ENST00000541351 COPS9Q8WXC6 57 aa4.85□□□□□ -1.63
YBX3-211ENST00000541351 SND1-IT1Q9HBX3 110 aa4.85□□□□□ -1.63
YBX3-211ENST00000541351 SMIM1B2RUZ4 78 aa4.84□□□□□ -1.63
YBX3-211ENST00000541351 H7C2G1 150 aa4.84□□□□□ -1.63
YBX3-211ENST00000541351 TRACP01848 142 aa4.84□□□□□ -1.63
YBX3-211ENST00000541351 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
YBX3-211ENST00000541351 ZNF22P17026 224 aaPredicted RBP4.84□□□□□ -1.63
YBX3-211ENST00000541351 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
YBX3-211ENST00000541351 SPRR1AP35321 89 aa4.82□□□□□ -1.64
YBX3-211ENST00000541351 LITAFQ99732 161 aa4.82□□□□□ -1.64
YBX3-211ENST00000541351 KCNQ1DNQ9H478 68 aa4.81□□□□□ -1.64
YBX3-211ENST00000541351 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
YBX3-211ENST00000541351 Q6JHZ5 121 aa4.8□□□□□ -1.64
YBX3-211ENST00000541351 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
YBX3-211ENST00000541351 SERP2Q8N6R1 65 aa4.8□□□□□ -1.64
YBX3-211ENST00000541351 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
YBX3-211ENST00000541351 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms