RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
PHC1-208ENST00000540574 IGHV6-1A0A0B4J1U7 121 aa6.27□□□□□ -1.4
PHC1-208ENST00000540574 PCOTHQ58A44 107 aa6.27□□□□□ -1.4
PHC1-208ENST00000540574 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.4
PHC1-208ENST00000540574 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.4
PHC1-208ENST00000540574 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
PHC1-208ENST00000540574 TLX1NBP0CAT3 122 aa6.27□□□□□ -1.41
PHC1-208ENST00000540574 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
PHC1-208ENST00000540574 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
PHC1-208ENST00000540574 NDUFC1O43677 76 aa6.25□□□□□ -1.41
PHC1-208ENST00000540574 MOBPQ13875 183 aa6.25□□□□□ -1.41
PHC1-208ENST00000540574 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
PHC1-208ENST00000540574 RETNLBQ9BQ08 111 aa6.25□□□□□ -1.41
PHC1-208ENST00000540574 APLNQ9ULZ1 77 aa6.25□□□□□ -1.41
PHC1-208ENST00000540574 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
PHC1-208ENST00000540574 PSPHP1O15172 72 aa6.23□□□□□ -1.41
PHC1-208ENST00000540574 KRTAP7-1Q8IUC3 87 aa6.23□□□□□ -1.41
PHC1-208ENST00000540574 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
PHC1-208ENST00000540574 C9orf163Q8N9P6 203 aa6.22□□□□□ -1.41
PHC1-208ENST00000540574 H0Y9P7 68 aa6.22□□□□□ -1.41
PHC1-208ENST00000540574 RTL8CO15255 209 aa6.22□□□□□ -1.41
PHC1-208ENST00000540574 KLKP1Q107X0 134 aa6.22□□□□□ -1.41
PHC1-208ENST00000540574 OXTP01178 125 aa6.21□□□□□ -1.42
PHC1-208ENST00000540574 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
PHC1-208ENST00000540574 PANO1I0J062 215 aa6.21□□□□□ -1.42
PHC1-208ENST00000540574 C1orf134Q5TEV5 83 aa6.21□□□□□ -1.42
PHC1-208ENST00000540574 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
PHC1-208ENST00000540574 DSCR10P59022 87 aa6.2□□□□□ -1.42
PHC1-208ENST00000540574 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
PHC1-208ENST00000540574 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
PHC1-208ENST00000540574 BCE1O60756 84 aa6.18□□□□□ -1.42
PHC1-208ENST00000540574 SPRR1AP35321 89 aa6.18□□□□□ -1.42
PHC1-208ENST00000540574 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
PHC1-208ENST00000540574 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
PHC1-208ENST00000540574 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
PHC1-208ENST00000540574 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
PHC1-208ENST00000540574 A0A087WTM6 91 aa6.16□□□□□ -1.42
PHC1-208ENST00000540574 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
PHC1-208ENST00000540574 hDV103S1A0JD37 113 aa6.15□□□□□ -1.42
PHC1-208ENST00000540574 PSORS1C2Q9UIG4 136 aa6.15□□□□□ -1.42
PHC1-208ENST00000540574 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
PHC1-208ENST00000540574 ZNF706Q9Y5V0 76 aaPredicted RBP6.13□□□□□ -1.43
PHC1-208ENST00000540574 SPTSSBQ8NFR3 76 aa6.13□□□□□ -1.43
PHC1-208ENST00000540574 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
PHC1-208ENST00000540574 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
PHC1-208ENST00000540574 FAM229BQ4G0N7 80 aa6.11□□□□□ -1.43
PHC1-208ENST00000540574 LINC00336Q6ZUF6 198 aa6.11□□□□□ -1.43
PHC1-208ENST00000540574 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
PHC1-208ENST00000540574 A8MWP4 228 aa6.1□□□□□ -1.43
PHC1-208ENST00000540574 TNP2Q05952 138 aa6.1□□□□□ -1.43
PHC1-208ENST00000540574 FBN3Q75N90 2809 aa6.1□□□□□ -1.43
PHC1-208ENST00000540574 A0A1B0GW54 56 aa6.1□□□□□ -1.43
PHC1-208ENST00000540574 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
PHC1-208ENST00000540574 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
PHC1-208ENST00000540574 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
PHC1-208ENST00000540574 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
PHC1-208ENST00000540574 Q5XG85 94 aa6.06□□□□□ -1.44
PHC1-208ENST00000540574 ZNF861PO60384 105 aa6.06□□□□□ -1.44
PHC1-208ENST00000540574 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
PHC1-208ENST00000540574 ANK2Q01484 3957 aa6.05□□□□□ -1.44
PHC1-208ENST00000540574 A6NED7 52 aa6.04□□□□□ -1.44
PHC1-208ENST00000540574 A8MUN3 132 aa6.04□□□□□ -1.44
PHC1-208ENST00000540574 SPAG11AQ6PDA7 123 aa6.03□□□□□ -1.44
PHC1-208ENST00000540574 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
PHC1-208ENST00000540574 SMR3BP02814 79 aaPredicted RBP6.02□□□□□ -1.45
PHC1-208ENST00000540574 IGKV2D-30A0A075B6S6 120 aa6.01□□□□□ -1.45
PHC1-208ENST00000540574 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
PHC1-208ENST00000540574 MEGF8Q7Z7M0 2845 aa5.99□□□□□ -1.45
PHC1-208ENST00000540574 SPINK1P00995 79 aa5.99□□□□□ -1.45
PHC1-208ENST00000540574 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
PHC1-208ENST00000540574 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
PHC1-208ENST00000540574 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
PHC1-208ENST00000540574 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
PHC1-208ENST00000540574 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
PHC1-208ENST00000540574 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
PHC1-208ENST00000540574 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
PHC1-208ENST00000540574 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
PHC1-208ENST00000540574 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
PHC1-208ENST00000540574 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
PHC1-208ENST00000540574 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
PHC1-208ENST00000540574 COA5Q86WW8 74 aa5.96□□□□□ -1.46
PHC1-208ENST00000540574 DNAH10Q8IVF4 4471 aa5.96□□□□□ -1.46
PHC1-208ENST00000540574 A0A087X002 238 aa5.95□□□□□ -1.46
PHC1-208ENST00000540574 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
PHC1-208ENST00000540574 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
PHC1-208ENST00000540574 LINC00313P59037 77 aa5.95□□□□□ -1.46
PHC1-208ENST00000540574 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
PHC1-208ENST00000540574 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
PHC1-208ENST00000540574 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
PHC1-208ENST00000540574 SPRR1BP22528 89 aa5.93□□□□□ -1.46
PHC1-208ENST00000540574 V9GYY9 64 aa5.93□□□□□ -1.46
PHC1-208ENST00000540574 HUWE1Q7Z6Z7 4374 aaKnown RBP5.93□□□□□ -1.46
PHC1-208ENST00000540574 FLG2Q5D862 2391 aaPredicted RBP5.93□□□□□ -1.46
PHC1-208ENST00000540574 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
PHC1-208ENST00000540574 LYSTQ99698 3801 aa5.91□□□□□ -1.46
PHC1-208ENST00000540574 PRR26Q8N8Z3 221 aa5.91□□□□□ -1.46
PHC1-208ENST00000540574 PLAC8Q9NZF1 115 aa5.9□□□□□ -1.46
PHC1-208ENST00000540574 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
PHC1-208ENST00000540574 H3BPC8 53 aa5.89□□□□□ -1.47
PHC1-208ENST00000540574 Q96NJ1 140 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms