RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 UBE2BP63146 152 aa7.16□□□□□ -1.26
CPT1A-206ENST00000540367 MRPL55Q7Z7F7 128 aaKnown RBP7.16□□□□□ -1.26
CPT1A-206ENST00000540367 CASC10Q5T4H9 136 aa7.16□□□□□ -1.26
CPT1A-206ENST00000540367 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.26
CPT1A-206ENST00000540367 TENM2Q9NT68 2774 aa7.15□□□□□ -1.26
CPT1A-206ENST00000540367 NDUFB1O75438 58 aa7.15□□□□□ -1.26
CPT1A-206ENST00000540367 LINC00476Q8WZB0 136 aa7.15□□□□□ -1.26
CPT1A-206ENST00000540367 PSCAO43653 123 aa7.15□□□□□ -1.27
CPT1A-206ENST00000540367 LRCOL1A6NCL2 159 aa7.14□□□□□ -1.27
CPT1A-206ENST00000540367 REG3GQ6UW15 175 aa7.12□□□□□ -1.27
CPT1A-206ENST00000540367 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
CPT1A-206ENST00000540367 IGFL1Q6UW32 110 aa7.12□□□□□ -1.27
CPT1A-206ENST00000540367 C11orf45Q8TAV5 145 aa7.11□□□□□ -1.27
CPT1A-206ENST00000540367 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
CPT1A-206ENST00000540367 J3QL48 77 aa7.11□□□□□ -1.27
CPT1A-206ENST00000540367 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
CPT1A-206ENST00000540367 A0A0G2JQZ4 141 aa7.1□□□□□ -1.27
CPT1A-206ENST00000540367 A0A1W2PNN7 141 aa7.1□□□□□ -1.27
CPT1A-206ENST00000540367 PRR4Q16378 134 aa7.09□□□□□ -1.27
CPT1A-206ENST00000540367 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
CPT1A-206ENST00000540367 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
CPT1A-206ENST00000540367 PSPHP1O15172 72 aa7.08□□□□□ -1.28
CPT1A-206ENST00000540367 MP68P56378 58 aa7.08□□□□□ -1.28
CPT1A-206ENST00000540367 DEFB116Q30KQ4 102 aa7.08□□□□□ -1.28
CPT1A-206ENST00000540367 LINC00588Q9Y4M8 146 aa7.08□□□□□ -1.28
CPT1A-206ENST00000540367 SRRM2Q9UQ35 2752 aaKnown RBP7.08□□□□□ -1.28
CPT1A-206ENST00000540367 DNAH1Q9P2D7 4330 aa7.08□□□□□ -1.28
CPT1A-206ENST00000540367 A0A087WSZ3 146 aa7.07□□□□□ -1.28
CPT1A-206ENST00000540367 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
CPT1A-206ENST00000540367 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
CPT1A-206ENST00000540367 PRLHP81277 87 aa7.05□□□□□ -1.28
CPT1A-206ENST00000540367 LINC00208Q96KT6 92 aa7.05□□□□□ -1.28
CPT1A-206ENST00000540367 DNHD1Q96M86 4753 aa7.05□□□□□ -1.28
CPT1A-206ENST00000540367 RPL37AP61513 92 aaKnown RBP7.04□□□□□ -1.28
CPT1A-206ENST00000540367 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
CPT1A-206ENST00000540367 B9D2Q9BPU9 175 aa7.04□□□□□ -1.28
CPT1A-206ENST00000540367 H3BPC8 53 aa7.03□□□□□ -1.28
CPT1A-206ENST00000540367 A8MUN3 132 aa7.02□□□□□ -1.29
CPT1A-206ENST00000540367 H0Y9P7 68 aa7.02□□□□□ -1.29
CPT1A-206ENST00000540367 UBE2AP49459 152 aa7.02□□□□□ -1.29
CPT1A-206ENST00000540367 CASC2Q6XLA1 102 aa7.02□□□□□ -1.29
CPT1A-206ENST00000540367 LIMD2Q9BT23 127 aa7.02□□□□□ -1.29
CPT1A-206ENST00000540367 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
CPT1A-206ENST00000540367 A0A096LNI7 61 aa7.01□□□□□ -1.29
CPT1A-206ENST00000540367 CNBPP62633 177 aaKnown RBP7□□□□□ -1.29
CPT1A-206ENST00000540367 Q5VV11 94 aa7□□□□□ -1.29
CPT1A-206ENST00000540367 PRKDCP78527 4128 aaKnown RBP7□□□□□ -1.29
CPT1A-206ENST00000540367 C16orf90A8MZG2 172 aa7□□□□□ -1.29
CPT1A-206ENST00000540367 IGKV2-24A0A0C4DH68 120 aa6.99□□□□□ -1.29
CPT1A-206ENST00000540367 A8MWP4 228 aa6.99□□□□□ -1.29
CPT1A-206ENST00000540367 MDFIQ99750 246 aa6.99□□□□□ -1.29
CPT1A-206ENST00000540367 SPRR1BP22528 89 aa6.98□□□□□ -1.29
CPT1A-206ENST00000540367 K7EIL1 84 aa6.97□□□□□ -1.29
CPT1A-206ENST00000540367 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
CPT1A-206ENST00000540367 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.3
CPT1A-206ENST00000540367 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
CPT1A-206ENST00000540367 CHKB-CPT1BH3BT56 60 aa6.95□□□□□ -1.3
CPT1A-206ENST00000540367 H0Y9J4 135 aa6.94□□□□□ -1.3
CPT1A-206ENST00000540367 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
CPT1A-206ENST00000540367 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
CPT1A-206ENST00000540367 KRTAP11-1Q8IUC1 163 aa6.93□□□□□ -1.3
CPT1A-206ENST00000540367 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
CPT1A-206ENST00000540367 KTN1-AS1Q86SY8 53 aa6.92□□□□□ -1.3
CPT1A-206ENST00000540367 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
CPT1A-206ENST00000540367 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
CPT1A-206ENST00000540367 Q75L30 129 aa6.92□□□□□ -1.3
CPT1A-206ENST00000540367 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
CPT1A-206ENST00000540367 A8MU10 97 aa6.91□□□□□ -1.3
CPT1A-206ENST00000540367 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
CPT1A-206ENST00000540367 CHTF8P0CG12 524 aa6.91□□□□□ -1.3
CPT1A-206ENST00000540367 ATP11AUNQ6ZP68 121 aa6.91□□□□□ -1.3
CPT1A-206ENST00000540367 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.31
CPT1A-206ENST00000540367 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
CPT1A-206ENST00000540367 COA5Q86WW8 74 aa6.89□□□□□ -1.31
CPT1A-206ENST00000540367 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
CPT1A-206ENST00000540367 H3BS24 57 aa6.88□□□□□ -1.31
CPT1A-206ENST00000540367 NDUFS5O43920 106 aa6.88□□□□□ -1.31
CPT1A-206ENST00000540367 A6NED7 52 aa6.87□□□□□ -1.31
CPT1A-206ENST00000540367 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
CPT1A-206ENST00000540367 SPTSSBQ8NFR3 76 aa6.86□□□□□ -1.31
CPT1A-206ENST00000540367 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
CPT1A-206ENST00000540367 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
CPT1A-206ENST00000540367 TP53AIP1Q9HCN2 124 aa6.85□□□□□ -1.31
CPT1A-206ENST00000540367 MOBPQ13875 183 aa6.84□□□□□ -1.31
CPT1A-206ENST00000540367 Q96NJ1 140 aa6.84□□□□□ -1.31
CPT1A-206ENST00000540367 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
CPT1A-206ENST00000540367 TGP01266 2768 aa6.84□□□□□ -1.31
CPT1A-206ENST00000540367 LCA10Q71F78 164 aa6.84□□□□□ -1.32
CPT1A-206ENST00000540367 PCOTHQ58A44 107 aa6.83□□□□□ -1.32
CPT1A-206ENST00000540367 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
CPT1A-206ENST00000540367 Q6ZR54 194 aa6.82□□□□□ -1.32
CPT1A-206ENST00000540367 A6NN06 94 aa6.82□□□□□ -1.32
CPT1A-206ENST00000540367 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
CPT1A-206ENST00000540367 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
CPT1A-206ENST00000540367 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
CPT1A-206ENST00000540367 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
CPT1A-206ENST00000540367 PANO1I0J062 215 aa6.8□□□□□ -1.32
CPT1A-206ENST00000540367 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
CPT1A-206ENST00000540367 IGLV9-49A0A0B4J1Y8 123 aa6.78□□□□□ -1.32
CPT1A-206ENST00000540367 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms