RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 DEFB135Q30KP9 77 aa2.31□□□□□ -2.04
PCM1-223ENST00000524356 DEFB114Q30KQ6 69 aa2.31□□□□□ -2.04
PCM1-223ENST00000524356 ZNF833PQ6ZTB9 187 aa2.31□□□□□ -2.04
PCM1-223ENST00000524356 TMEM141Q96I45 108 aa2.31□□□□□ -2.04
PCM1-223ENST00000524356 TTTY10Q9BZA0 68 aa2.31□□□□□ -2.04
PCM1-223ENST00000524356 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
PCM1-223ENST00000524356 ZNF56Q15929 161 aa2.3□□□□□ -2.04
PCM1-223ENST00000524356 KRTAP26-1Q6PEX3 210 aa2.3□□□□□ -2.04
PCM1-223ENST00000524356 MYMXA0A1B0GTQ4 84 aa2.29□□□□□ -2.04
PCM1-223ENST00000524356 H7BZZ5 65 aa2.29□□□□□ -2.04
PCM1-223ENST00000524356 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
PCM1-223ENST00000524356 S100A7L2Q5SY68 101 aa2.29□□□□□ -2.04
PCM1-223ENST00000524356 LYPD5Q6UWN5 251 aa2.29□□□□□ -2.04
PCM1-223ENST00000524356 GNG13Q9P2W3 67 aa2.29□□□□□ -2.04
PCM1-223ENST00000524356 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 NDUFC1O43677 76 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 LEPROTL1O95214 131 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 APELAP0DMC3 54 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 RBM3P98179 157 aaKnown RBP2.28□□□□□ -2.04
PCM1-223ENST00000524356 PDE6HQ13956 83 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 RHOHQ15669 191 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.28□□□□□ -2.04
PCM1-223ENST00000524356 TIMM21Q9BVV7 248 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 LINC00474Q9P2X8 69 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 VPS13BQ7Z7G8 4022 aa2.28□□□□□ -2.04
PCM1-223ENST00000524356 LRP2P98164 4655 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 TRBV7-3A0A075B6L6 115 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 A0A0G2JQZ4 141 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 CEBPZOSA8MTT3 80 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 BCE1O60756 84 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 NDUFA3O95167 84 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 PPYP01298 95 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 SMR3BP02814 79 aaPredicted RBP2.27□□□□□ -2.05
PCM1-223ENST00000524356 RNASE2P10153 161 aaKnown RBP2.27□□□□□ -2.05
PCM1-223ENST00000524356 LINC00315P59091 139 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 CNBPP62633 177 aaKnown RBP2.27□□□□□ -2.05
PCM1-223ENST00000524356 HAMPP81172 84 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 KLKP1Q107X0 134 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 Q1T7F1 81 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
PCM1-223ENST00000524356 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
PCM1-223ENST00000524356 TRBV7-1A0A0A6YYK4 115 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 TRAV13-2A0A0B4J235 113 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 CRYM-AS1A6NIL9 109 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 J3QRE1 110 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 IGHV3-33P01772 117 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 UBE2D1P51668 147 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 ZNF137PP52743 207 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 TPRXLQ17RH7 258 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 PIGYQ3MUY2 71 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 FAM223AQ8IWN6 122 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 LYPD1Q8N2G4 141 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 TXNDC17Q9BRA2 123 aa2.26□□□□□ -2.05
PCM1-223ENST00000524356 MRPL35Q9NZE8 188 aaKnown RBP2.26□□□□□ -2.05
PCM1-223ENST00000524356 TRBV25-1A0A075B6N4 114 aa2.25□□□□□ -2.05
PCM1-223ENST00000524356 SMIM11AP58511 58 aa2.25□□□□□ -2.05
PCM1-223ENST00000524356 FXYD3Q14802 87 aa2.25□□□□□ -2.05
PCM1-223ENST00000524356 RPL39P5Q59GN2 51 aa2.25□□□□□ -2.05
PCM1-223ENST00000524356 Q5VSD8 79 aa2.25□□□□□ -2.05
PCM1-223ENST00000524356 R4GMQ9 66 aa2.25□□□□□ -2.05
PCM1-223ENST00000524356 H3BVH4 76 aa2.24□□□□□ -2.05
PCM1-223ENST00000524356 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
PCM1-223ENST00000524356 SERF2P84101 59 aa2.24□□□□□ -2.05
PCM1-223ENST00000524356 Q6JHZ5 121 aa2.24□□□□□ -2.05
PCM1-223ENST00000524356 TEX49A0A1B0GTD5 131 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 TMEM30CPA0ZSE6 113 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 FAM223BA6NKX1 122 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 SAA2P0DJI9 122 aaPredicted RBP2.23□□□□□ -2.05
PCM1-223ENST00000524356 PRB4P10163 310 aaPredicted RBP2.23□□□□□ -2.05
PCM1-223ENST00000524356 IFI27P40305 119 aaPredicted RBP2.23□□□□□ -2.05
PCM1-223ENST00000524356 ATXN8Q156A1 80 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 C10orf55Q5SWW7 151 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 V9GYV3 84 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
PCM1-223ENST00000524356 DEFB131BA0A096LNP1 70 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 TRBV10-3A0A0K0K1G6 114 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 CTXND1A0A1B0GTU2 59 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 SMIM27A0A1W2PRY6 76 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 SDHAF1A6NFY7 115 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 LINC01549A6NIU2 74 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 PLGLAQ15195 96 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 USMG5Q96IX5 58 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 C22orf24Q9Y442 160 aa2.22□□□□□ -2.05
PCM1-223ENST00000524356 IGKV3-7A0A075B6H7 116 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 HCG22E2RYF7 251 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 H3BUA1 57 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 PRR9Q5T870 116 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 GDF5OSQ5U4N7 250 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 CYP4F30PQ9H0H9 118 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
PCM1-223ENST00000524356 DNAH8Q96JB1 4490 aa2.2□□□□□ -2.06
PCM1-223ENST00000524356 TRBV6-8A0A0A6YYG3 113 aa2.2□□□□□ -2.06
PCM1-223ENST00000524356 NBDYA0A0U1RRE5 68 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms