RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 TTC28Q96AY4 2481 aa1.3□□□□□ -2.2
SMARCE1P4-201ENST00000523647 SPTBN1Q01082 2364 aaKnown RBP1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 POLQO75417 2590 aa1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 DUOX1Q9NRD9 1551 aa1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 FBN3Q75N90 2809 aa1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
SMARCE1P4-201ENST00000523647 CELSR2Q9HCU4 2923 aa1.27□□□□□ -2.21
SMARCE1P4-201ENST00000523647 DSPP15924 2871 aaKnown RBP1.27□□□□□ -2.21
SMARCE1P4-201ENST00000523647 PKDREJQ9NTG1 2253 aa1.27□□□□□ -2.21
SMARCE1P4-201ENST00000523647 DEFB109BQ30KR1 87 aa1.25□□□□□ -2.21
SMARCE1P4-201ENST00000523647 GVINP1Q7Z2Y8 2422 aa1.24□□□□□ -2.21
SMARCE1P4-201ENST00000523647 H3BUA1 57 aa1.24□□□□□ -2.21
SMARCE1P4-201ENST00000523647 TRANK1O15050 2925 aa1.23□□□□□ -2.21
SMARCE1P4-201ENST00000523647 S4R3F8 94 aa1.23□□□□□ -2.21
SMARCE1P4-201ENST00000523647 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
SMARCE1P4-201ENST00000523647 IGLV5-48A0A075B6I7 105 aa1.22□□□□□ -2.21
SMARCE1P4-201ENST00000523647 WFDC10BQ8IUB3 73 aa1.22□□□□□ -2.21
SMARCE1P4-201ENST00000523647 KNL1Q8NG31 2342 aa1.21□□□□□ -2.22
SMARCE1P4-201ENST00000523647 ANK2Q01484 3957 aa1.21□□□□□ -2.22
SMARCE1P4-201ENST00000523647 ABCA12Q86UK0 2595 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 F8P00451 2351 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 SMR3AQ99954 134 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 KAAG1Q9UBP8 84 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 MROH2BQ7Z745 1585 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 PCNX1Q96RV3 2341 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 TENM4Q6N022 2769 aa1.19□□□□□ -2.22
SMARCE1P4-201ENST00000523647 CLTCL1P53675 1640 aa1.18□□□□□ -2.22
SMARCE1P4-201ENST00000523647 BDP1A6H8Y1 2624 aa1.18□□□□□ -2.22
SMARCE1P4-201ENST00000523647 IGF2RP11717 2491 aa1.18□□□□□ -2.22
SMARCE1P4-201ENST00000523647 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
SMARCE1P4-201ENST00000523647 PRLHP81277 87 aa1.17□□□□□ -2.22
SMARCE1P4-201ENST00000523647 DEFB131AP59861 70 aa1.16□□□□□ -2.22
SMARCE1P4-201ENST00000523647 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
SMARCE1P4-201ENST00000523647 TPRP12270 2363 aaKnown RBP1.16□□□□□ -2.22
SMARCE1P4-201ENST00000523647 MMP24-AS1A0A0U1RRL7 71 aa1.15□□□□□ -2.23
SMARCE1P4-201ENST00000523647 ABCA2Q9BZC7 2435 aa1.15□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 DEFB106AQ8N104 65 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 VWFP04275 2813 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 PRRC2CQ9Y520 2896 aaKnown RBP1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 PDE4DIPQ5VU43 2346 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 GCC2Q8IWJ2 1684 aa1.13□□□□□ -2.23
SMARCE1P4-201ENST00000523647 FBN2P35556 2912 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 ATRQ13535 2644 aa1.11□□□□□ -2.23
SMARCE1P4-201ENST00000523647 PIEZO1Q92508 2521 aa1.11□□□□□ -2.23
SMARCE1P4-201ENST00000523647 AKAP6Q13023 2319 aa1.11□□□□□ -2.23
SMARCE1P4-201ENST00000523647 FRAS1Q86XX4 4008 aa1.1□□□□□ -2.23
SMARCE1P4-201ENST00000523647 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
SMARCE1P4-201ENST00000523647 POLR2KP53803 58 aaKnown RBP1.1□□□□□ -2.23
SMARCE1P4-201ENST00000523647 CHD6Q8TD26 2715 aa1.09□□□□□ -2.23
SMARCE1P4-201ENST00000523647 AKAP13Q12802 2813 aa1.09□□□□□ -2.23
SMARCE1P4-201ENST00000523647 CSPG4Q6UVK1 2322 aa1.08□□□□□ -2.24
SMARCE1P4-201ENST00000523647 NOP10Q9NPE3 64 aaKnown RBP1.08□□□□□ -2.24
SMARCE1P4-201ENST00000523647 OTOGQ6ZRI0 2925 aa1.08□□□□□ -2.24
SMARCE1P4-201ENST00000523647 APCP25054 2843 aa1.07□□□□□ -2.24
SMARCE1P4-201ENST00000523647 BSNQ9UPA5 3926 aa1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 PRKDCP78527 4128 aaKnown RBP1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 CELSR1Q9NYQ6 3014 aa1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 A0A0C4DFX4 3053 aa1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 M0R2T5 61 aa1.05□□□□□ -2.24
SMARCE1P4-201ENST00000523647 SPINK1P00995 79 aa1.05□□□□□ -2.24
SMARCE1P4-201ENST00000523647 DEFB135Q30KP9 77 aa1.05□□□□□ -2.24
SMARCE1P4-201ENST00000523647 FAT2Q9NYQ8 4349 aa1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 RPL39P62891 51 aaKnown RBP1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 U3KQA8 63 aa1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 HECTD1Q9ULT8 2610 aa1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 H0YGG7 62 aa1.01□□□□□ -2.25
SMARCE1P4-201ENST00000523647 TNXBP22105 4242 aa1.01□□□□□ -2.25
SMARCE1P4-201ENST00000523647 CLPSL2Q6UWE3 100 aa1□□□□□ -2.25
SMARCE1P4-201ENST00000523647 SPTA1P02549 2419 aa1□□□□□ -2.25
SMARCE1P4-201ENST00000523647 TNRC18O15417 2968 aaPredicted RBP0.98□□□□□ -2.25
SMARCE1P4-201ENST00000523647 A8MTW9 85 aa0.98□□□□□ -2.25
SMARCE1P4-201ENST00000523647 M0QY20 66 aa0.97□□□□□ -2.25
SMARCE1P4-201ENST00000523647 CHD8Q9HCK8 2581 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 PRM1P04553 51 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 RPL39LQ96EH5 51 aaKnown RBP0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 CEP290O15078 2479 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 PKD1L2Q7Z442 2459 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 EP300Q09472 2414 aaPredicted RBP0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 LYSTQ99698 3801 aa0.95□□□□□ -2.26
SMARCE1P4-201ENST00000523647 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
SMARCE1P4-201ENST00000523647 NCOR1O75376 2440 aa0.95□□□□□ -2.26
SMARCE1P4-201ENST00000523647 PKD1L1Q8TDX9 2849 aa0.93□□□□□ -2.26
SMARCE1P4-201ENST00000523647 ARHGAP5-AS1Q96IT6 56 aa0.93□□□□□ -2.26
SMARCE1P4-201ENST00000523647 NOTCH1P46531 2555 aa0.92□□□□□ -2.26
SMARCE1P4-201ENST00000523647 UBR5O95071 2799 aaPredicted RBP0.92□□□□□ -2.26
SMARCE1P4-201ENST00000523647 HUWE1Q7Z6Z7 4374 aaKnown RBP0.92□□□□□ -2.26
SMARCE1P4-201ENST00000523647 UNC79Q9P2D8 2635 aa0.91□□□□□ -2.26
SMARCE1P4-201ENST00000523647 M0QZ58 72 aa0.91□□□□□ -2.26
SMARCE1P4-201ENST00000523647 C9orf92A6NGG3 77 aa0.9□□□□□ -2.27
SMARCE1P4-201ENST00000523647 PDZD2O15018 2839 aa0.9□□□□□ -2.27
SMARCE1P4-201ENST00000523647 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
SMARCE1P4-201ENST00000523647 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
SMARCE1P4-201ENST00000523647 VPS13BQ7Z7G8 4022 aa0.87□□□□□ -2.27
SMARCE1P4-201ENST00000523647 LEAP2Q969E1 77 aa0.87□□□□□ -2.27
SMARCE1P4-201ENST00000523647 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SMARCE1P4-201ENST00000523647 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms