RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FAM213BQ8TBF2 198 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 C10orf95Q9H7T3 257 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 CDC42SE2Q9NRR3 84 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 SPTBN1Q01082 2364 aaKnown RBP1.04□□□□□ -2.24
SQLE-204ENST00000520493 CHKB-CPT1BH3BT56 60 aa1.04□□□□□ -2.24
SQLE-204ENST00000520493 Q0VG73 95 aa1.04□□□□□ -2.24
SQLE-204ENST00000520493 COL5A1-AS1Q5SY13 56 aa1.04□□□□□ -2.24
SQLE-204ENST00000520493 SMIM4Q8WVI0 70 aa1.04□□□□□ -2.24
SQLE-204ENST00000520493 COX14Q96I36 57 aa1.04□□□□□ -2.24
SQLE-204ENST00000520493 FRAS1Q86XX4 4008 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 AHCTF1Q8WYP5 2266 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 TRAV22A0A0B4J277 110 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 F8VRH5 84 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 PDCD5O14737 125 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 UQCR11O14957 56 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 HMGN2P05204 90 aaKnown RBP1.03□□□□□ -2.24
SQLE-204ENST00000520493 COX6CP09669 75 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 IFI6P09912 130 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 TRAPPC2P0DI81 140 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 TRAPPC2BP0DI82 140 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 GCHFRP30047 84 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 TMEM170BQ5T4T1 132 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 BAGE2Q86Y30 109 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 LCN9Q8WX39 176 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 PROK2Q9HC23 129 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 PRO1854Q9UHT4 67 aa1.03□□□□□ -2.24
SQLE-204ENST00000520493 CTXND1A0A1B0GTU2 59 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 hADV29S1A0JD25 119 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 IGLC7A0M8Q6 106 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 CRYM-AS1A6NIL9 109 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 CPSF4LA6NMK7 179 aaKnown RBP1.02□□□□□ -2.25
SQLE-204ENST00000520493 H0YGG7 62 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 PIN1P1O15428 100 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 MT-ATP8P03928 68 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 COX17Q14061 63 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 CFAP126Q5VTH2 177 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 S100A16Q96FQ6 103 aaKnown RBP1.02□□□□□ -2.25
SQLE-204ENST00000520493 MANBALQ9NQG1 85 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 CMC2Q9NRP2 79 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 ABRACLQ9P1F3 81 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 LINC01558Q9Y6Z2 57 aa1.02□□□□□ -2.25
SQLE-204ENST00000520493 CMYA5Q8N3K9 4069 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 ZNF469Q96JG9 3925 aaPredicted RBP1.01□□□□□ -2.25
SQLE-204ENST00000520493 SPTY2D1-AS1A0A0U1RR47 76 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 A0A1B0GWA3 101 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 G3V318 75 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 NDUFC1O43677 76 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 SFT2D2O95562 160 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 APOC3P02656 99 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 STATHP02808 62 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 FAUP35544 74 aaKnown RBP1.01□□□□□ -2.25
SQLE-204ENST00000520493 GNG2P59768 71 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 SEC11AP67812 179 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 TOMM5Q8N4H5 51 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 SNHG12Q9BXW3 62 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 LRP1BQ9NZR2 4599 aa1.01□□□□□ -2.25
SQLE-204ENST00000520493 DNAH7Q8WXX0 4024 aa1□□□□□ -2.25
SQLE-204ENST00000520493 SNRPGP15A8MWD9 76 aa1□□□□□ -2.25
SQLE-204ENST00000520493 TRRAPQ9Y4A5 3859 aa1□□□□□ -2.25
SQLE-204ENST00000520493 C10orf142B7Z368 130 aa0.99□□□□□ -2.25
SQLE-204ENST00000520493 UBA52P62987 128 aaKnown RBP0.99□□□□□ -2.25
SQLE-204ENST00000520493 DEFB110Q30KQ9 67 aa0.99□□□□□ -2.25
SQLE-204ENST00000520493 Q5BKY6 102 aa0.99□□□□□ -2.25
SQLE-204ENST00000520493 LINC01590Q5TEZ4 76 aa0.99□□□□□ -2.25
SQLE-204ENST00000520493 C9orf62Q8N4C0 152 aa0.99□□□□□ -2.25
SQLE-204ENST00000520493 NXT2Q9NPJ8 142 aaKnown RBP0.99□□□□□ -2.25
SQLE-204ENST00000520493 CSMD3Q7Z407 3707 aa0.99□□□□□ -2.25
SQLE-204ENST00000520493 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 FXYD6-FXYD2A0A087WZ82 144 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 KANTRA0A1W2PQU2 76 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 CYB5AP00167 134 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 DEFB133Q30KQ1 61 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 S100A13Q99584 98 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 PMCHL2Q9BQD1 86 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 FAM103A1Q9BTL3 118 aaKnown RBP0.98□□□□□ -2.25
SQLE-204ENST00000520493 TTTY10Q9BZA0 68 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 FXYD6Q9H0Q3 95 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 MYO7AQ13402 2215 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 HSPG2P98160 4391 aa0.98□□□□□ -2.25
SQLE-204ENST00000520493 GOLGA4Q13439 2230 aaKnown RBP0.97□□□□□ -2.25
SQLE-204ENST00000520493 LRP2P98164 4655 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 H3BSH0 61 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 ATOX1O00244 68 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 CFDP00746 253 aaPredicted RBP0.97□□□□□ -2.25
SQLE-204ENST00000520493 NMBP08949 121 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 RPS27P42677 84 aaKnown RBP0.97□□□□□ -2.25
SQLE-204ENST00000520493 PRB3Q04118 309 aaPredicted RBP0.97□□□□□ -2.25
SQLE-204ENST00000520493 HMGN3Q15651 99 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 ALKAL2Q6UX46 152 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 VAMP8Q9BV40 100 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 NMES1Q9C002 83 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 V9GYS6 101 aa0.97□□□□□ -2.25
SQLE-204ENST00000520493 LRP1Q07954 4544 aaKnown RBP0.96□□□□□ -2.26
SQLE-204ENST00000520493 CADP27708 2225 aa0.96□□□□□ -2.26
SQLE-204ENST00000520493 MRPL33O75394 65 aaKnown RBP0.96□□□□□ -2.26
SQLE-204ENST00000520493 MGPP08493 103 aa0.96□□□□□ -2.26
SQLE-204ENST00000520493 DEFA5Q01523 94 aa0.96□□□□□ -2.26
SQLE-204ENST00000520493 PEA15Q15121 130 aa0.96□□□□□ -2.26
SQLE-204ENST00000520493 ARHGAP5-AS1Q96IT6 56 aa0.96□□□□□ -2.26
SQLE-204ENST00000520493 LINC00472Q9H8W2 130 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms