RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ANAPC11Q9NYG5 84 aa3.46□□□□□ -1.86
SCARNA6.1-201ENST00000516989 MUC2Q02817 5179 aa3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 ERC2-IT1O76042 136 aa3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 CRYGAP11844 174 aa3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 FXYD2P54710 66 aa3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 Q9BRP9 147 aa3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 ZNF706Q9Y5V0 76 aaPredicted RBP3.45□□□□□ -1.86
SCARNA6.1-201ENST00000516989 LRP1Q07954 4544 aaKnown RBP3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 TRBV7-6A0A0J9YX20 115 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 A0A1B0GWB2 263 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 KRTAP10-8P60410 259 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 Q1RN00 199 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 NHP2Q9NX24 153 aaKnown RBP3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 PRO1854Q9UHT4 67 aa3.44□□□□□ -1.86
SCARNA6.1-201ENST00000516989 A0A0B4J2C4 111 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 SLC25A20O43772 301 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 MT1HL1P0DM35 61 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 CTAG1AP78358 180 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 FAM229BQ4G0N7 80 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 ST20-AS1Q8NBB2 130 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 DEFB105AQ8NG35 78 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
SCARNA6.1-201ENST00000516989 SEC61GP60059 68 aa3.42□□□□□ -1.86
SCARNA6.1-201ENST00000516989 BVES-AS1Q5T3Y7 98 aa3.42□□□□□ -1.86
SCARNA6.1-201ENST00000516989 FAT3Q8TDW7 4589 aa3.42□□□□□ -1.86
SCARNA6.1-201ENST00000516989 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 hADV29S1A0JD25 119 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 K7ERJ3 54 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 M0R143 59 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 PSMB2P49721 201 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 KRTAP13-2Q52LG2 175 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 LINC00575Q6W349 94 aa3.41□□□□□ -1.86
SCARNA6.1-201ENST00000516989 H0YGX0 51 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 SNCGO76070 127 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 TSPAN13O95857 204 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 LINC00483Q53H64 154 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 C3orf22Q8N5N4 141 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 LAMTOR3Q9UHA4 124 aa3.4□□□□□ -1.87
SCARNA6.1-201ENST00000516989 TEX49A0A1B0GTD5 131 aa3.39□□□□□ -1.87
SCARNA6.1-201ENST00000516989 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
SCARNA6.1-201ENST00000516989 COX6CP09669 75 aa3.39□□□□□ -1.87
SCARNA6.1-201ENST00000516989 BATFQ16520 125 aa3.39□□□□□ -1.87
SCARNA6.1-201ENST00000516989 C9orf153Q5TBE3 101 aa3.39□□□□□ -1.87
SCARNA6.1-201ENST00000516989 MTURNQ8N3F0 131 aa3.39□□□□□ -1.87
SCARNA6.1-201ENST00000516989 MOBPQ13875 183 aa3.38□□□□□ -1.87
SCARNA6.1-201ENST00000516989 Q6ZQY7 126 aa3.38□□□□□ -1.87
SCARNA6.1-201ENST00000516989 SSBP3-AS1Q7Z2R9 100 aa3.38□□□□□ -1.87
SCARNA6.1-201ENST00000516989 Q8N377 158 aa3.38□□□□□ -1.87
SCARNA6.1-201ENST00000516989 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
SCARNA6.1-201ENST00000516989 IGLV5-48A0A075B6I7 105 aa3.37□□□□□ -1.87
SCARNA6.1-201ENST00000516989 SPRR1BP22528 89 aa3.37□□□□□ -1.87
SCARNA6.1-201ENST00000516989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.37□□□□□ -1.87
SCARNA6.1-201ENST00000516989 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
SCARNA6.1-201ENST00000516989 SPAG11AQ6PDA7 123 aa3.36□□□□□ -1.87
SCARNA6.1-201ENST00000516989 CLEC2BQ92478 149 aa3.36□□□□□ -1.87
SCARNA6.1-201ENST00000516989 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
SCARNA6.1-201ENST00000516989 TNXBP22105 4242 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 A0A1B0GX51 115 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 F8WEM9 126 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 DNAL4O96015 105 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 FABP2P12104 132 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 OCIAD2Q56VL3 154 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 HRCT1Q6UXD1 115 aa3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 NAA38Q9BRA0 125 aaKnown RBP3.35□□□□□ -1.87
SCARNA6.1-201ENST00000516989 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.88
SCARNA6.1-201ENST00000516989 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 H3BUT2 72 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 SPINK1P00995 79 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 PRR4Q16378 134 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 PPDPFLQ8WWR9 84 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 ORMDL1Q9P0S3 153 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
SCARNA6.1-201ENST00000516989 H3BMG7 143 aa3.32□□□□□ -1.88
SCARNA6.1-201ENST00000516989 RETNLBQ9BQ08 111 aa3.32□□□□□ -1.88
SCARNA6.1-201ENST00000516989 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
SCARNA6.1-201ENST00000516989 H3BQ85 93 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 TMEM256-PLSCR3K7ERE1 68 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 LST1O00453 97 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 TAX1BP3O14907 124 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 TCL1BO95988 128 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 TRACP01848 142 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 BAALC-AS2P0C853 105 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 ATXN8Q156A1 80 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 LYRM7Q5U5X0 104 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 Q6JHZ5 121 aa3.31□□□□□ -1.88
SCARNA6.1-201ENST00000516989 A0A1B0GV72 72 aa3.3□□□□□ -1.88
SCARNA6.1-201ENST00000516989 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 TRBV20-1A0A075B6N2 111 aa3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 CXCL6P80162 114 aa3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 CD164Q04900 197 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms