RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 LOC101927531A0A1B0GV80 90 aa2.11□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 KRTAP24-1Q3LI83 254 aa2.11□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 FAM229BQ4G0N7 80 aa2.11□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 LINC00483Q53H64 154 aa2.11□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 KRTAP7-1Q8IUC3 87 aa2.11□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 LINC00472Q9H8W2 130 aa2.11□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 SETD2Q9BYW2 2564 aaPredicted RBP2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 MMP24-AS1A0A0U1RRL7 71 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 C8orf87E5RJ46 101 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 CD164Q04900 197 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 PMAIP1Q13794 54 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 Q6ZR54 194 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 Q75L30 129 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 MDFIQ99750 246 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 UNC79Q9P2D8 2635 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 CENPEQ02224 2701 aa2.1□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 A0A1B0GVX0 72 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 A0A1W2PNN7 141 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 K7EIL1 84 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 ASB16-AS1Q495Z4 193 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 CASC10Q5T4H9 136 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 ATP11AUNQ6ZP68 121 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 KRTAP13-1Q8IUC0 172 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 SPACA4Q8TDM5 124 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 PRR15LQ9BU68 103 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 APLNQ9ULZ1 77 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 NF1P21359 2839 aa2.09□□□□□ -2.07
RNU4ATAC3P-201ENST00000516699 ZNF469Q96JG9 3925 aaPredicted RBP2.09□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 NSD1Q96L73 2696 aaPredicted RBP2.09□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 CHKB-CPT1BH3BT56 60 aa2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 PSPHP1O15172 72 aa2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 NDUFS5O43920 106 aa2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 PHF5AQ7RTV0 110 aaKnown RBP2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 COA5Q86WW8 74 aa2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 MRPL34Q9BQ48 92 aaKnown RBP2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 C8orf17Q9NRJ1 99 aa2.08□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 TEP1Q99973 2627 aaKnown RBP2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 FASNP49327 2511 aaKnown RBP2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 IGLV5-52A0A0A0MRZ9 124 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 IGLV9-49A0A0B4J1Y8 123 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 LRCOL1A6NCL2 159 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 A6NED7 52 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 Q5VV11 94 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 Q8N9P0 234 aaPredicted RBP2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 LINC01558Q9Y6Z2 57 aa2.07□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 IGHV6-1A0A0B4J1U7 121 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 A8MUN3 132 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 FAM229AH3BQW9 127 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 ZNF861PO60384 105 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 ACYP2P14621 99 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 SEC61GP60059 68 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 PRR4Q16378 134 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 DEFB116Q30KQ4 102 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 SSBP3-AS1Q7Z2R9 100 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 KTN1-AS1Q86SY8 53 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 KRTAP1-5Q9BYS1 174 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 PLAC8Q9NZF1 115 aa2.06□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 NBEAL2Q6ZNJ1 2754 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 NIPBLQ6KC79 2804 aaeCLIP2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 RTL8CO15255 209 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 CHTF8P0CG12 524 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 XP32Q5T750 250 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 Q6ZRN7 208 aaPredicted RBP2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 Q96NJ1 140 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 WWC2-AS2Q96NR7 200 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 HIVEP1P15822 2718 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 ITPR2Q14571 2701 aa2.05□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 ATRQ13535 2644 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 A0A087WTM6 91 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 NBPF19A0A087WUL8 3843 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 A0A087X002 238 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 CUBNO60494 3623 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 PCOTHQ58A44 107 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 ANK3Q12955 4377 aaKnown RBP2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 TENM4Q6N022 2769 aa2.04□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 HELZ2Q9BYK8 2649 aaKnown RBP2.03□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 A0A0G2JQZ4 141 aa2.03□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 IGLV7-43P04211 117 aa2.03□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 C7orf65Q6ZTY9 151 aa2.03□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 SPTSSBQ8NFR3 76 aa2.03□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
RNU4ATAC3P-201ENST00000516699 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 LINC00313P59037 77 aa2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 C1orf134Q5TEV5 83 aa2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 DMAC1Q96GE9 116 aa2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 KRTAP4-8Q9BYQ9 185 aa2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 F8P00451 2351 aa2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 VWFP04275 2813 aa2.02□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 A0A1B0GU69 56 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 PRB2P02812 416 aaPredicted RBP2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 HRES1P13985 223 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 SPAG11AQ6PDA7 123 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 KRTAP11-1Q8IUC1 163 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 PRR26Q8N8Z3 221 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 CIRBP-AS1Q8TBR5 109 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 OTOGQ6ZRI0 2925 aa2.01□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 KRTAP9-6A0A140TA67 174 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms