RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 ARPC4P59998 168 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 TDRG1Q3Y452 100 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 Q5XG85 94 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 C20orf197Q8N268 126 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 MT1MQ8N339 61 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 C1orf54Q8WWF1 131 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 IFI27L1Q96BM0 104 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 DPY30Q9C005 99 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 NPVFQ9HCQ7 196 aa0.3□□□□□ -2.36
RN7SKP49-201ENST00000516675 HMGN4O00479 90 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 NDUFB6O95139 128 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 NCR2O95944 276 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 APELAP0DMC3 54 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 LINC00694P0DN24 101 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 GCHFRP30047 84 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 RPL37P61927 97 aaKnown RBP0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 UBE2G1P62253 170 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 RPS25P62851 125 aaKnown RBP0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 COX6A2Q02221 97 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 LINC01556Q5JQF7 62 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 Q6ZUT4 128 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 TTC9CQ8N5M4 171 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 FAM213BQ8TBF2 198 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 SMIM11BQ8TCY0 68 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 COX7B2Q8TF08 81 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 ARL11Q969Q4 196 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 AQP10Q96PS8 301 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 RHPN1-AS1Q9BWJ2 59 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 CCDC167Q9P0B6 97 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 NDUFA12Q9UI09 145 aa0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 PAIP2BQ9ULR5 123 aaKnown RBP0.29□□□□□ -2.36
RN7SKP49-201ENST00000516675 A0A0D9SG42 100 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 FAM223BA6NKX1 122 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 M0R135 149 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 LINC00032P0C843 101 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 IFITM1P13164 125 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 S100A3P33764 101 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 RPS27P42677 84 aaKnown RBP0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 PLGLAQ15195 96 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 C9orf116Q5BN46 136 aaPredicted RBP0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 LINC01545Q5VT33 79 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 FAM223AQ8IWN6 122 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 TMEM191AQ9H0A3 160 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 RERGLQ9H628 205 aa0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 NOP10Q9NPE3 64 aaKnown RBP0.28□□□□□ -2.36
RN7SKP49-201ENST00000516675 A0A096LNI7 61 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 TRAV1-2A0A0B4J238 106 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 TRBV10-3A0A0K0K1G6 114 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 CTXND1A0A1B0GTU2 59 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 LOC105371267A0A1B0GV96 52 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 CPSF4LA6NMK7 179 aaKnown RBP0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 MIF4GDA9UHW6 222 aaKnown RBP0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 NDUFA4O00483 81 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 GNG7O60262 68 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 SNAPC5O75971 98 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 HTN1P15515 57 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 HIST1H1DP16402 221 aaKnown RBP0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 ELOF1P60002 83 aaKnown RBP0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 NPC2P61916 151 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 S100A12P80511 92 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 RPL39P5Q59GN2 51 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 PSMG4Q5JS54 123 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 COX6B2Q6YFQ2 88 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 C10orf95Q9H7T3 257 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 RABAC1Q9UI14 185 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 TIMM8BQ9Y5J9 83 aaPredicted RBP0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 IER3IP1Q9Y5U9 82 aa0.27□□□□□ -2.37
RN7SKP49-201ENST00000516675 TRGV1A0A0A0MS02 117 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 FAM24AA6NFZ4 105 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 PPP1R17O96001 155 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 CYB5AP00167 134 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 CFDP00746 253 aaPredicted RBP0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 SPINK1P00995 79 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 IFNGP01579 166 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 HMGN1P05114 100 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 NMBP08949 121 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 SAA2P0DJI9 122 aaPredicted RBP0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 UBE2D1P51668 147 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 RPL38P63173 70 aaKnown RBP0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 SELENOWP63302 87 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 RBM3P98179 157 aaKnown RBP0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 EMX2Q04743 252 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 C12orf73Q69YU5 71 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 BAGE3Q86Y29 109 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 TMEM167AQ8TBQ9 72 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 PPP3R2Q96LZ3 170 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 NAA60Q9H7X0 242 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 PRO0255Q9UI72 69 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 R4GMQ9 66 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 V9GYS6 101 aa0.26□□□□□ -2.37
RN7SKP49-201ENST00000516675 FXYD6-FXYD2A0A087WZ82 144 aa0.25□□□□□ -2.37
RN7SKP49-201ENST00000516675 TRAV13-2A0A0B4J235 113 aa0.25□□□□□ -2.37
RN7SKP49-201ENST00000516675 H3BQF6 201 aa0.25□□□□□ -2.37
RN7SKP49-201ENST00000516675 I3L2K1 104 aa0.25□□□□□ -2.37
RN7SKP49-201ENST00000516675 K7EIM0 57 aa0.25□□□□□ -2.37
RN7SKP49-201ENST00000516675 SPINK4O60575 86 aa0.25□□□□□ -2.37
RN7SKP49-201ENST00000516675 RBP2P50120 134 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms