RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 ABRACLQ9P1F3 81 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 GNG13Q9P2W3 67 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 KAAG1Q9UBP8 84 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 MXRA5Q9NR99 2828 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 A0A087WVE0 104 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 TRAV1-2A0A0B4J238 106 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 MGPP08493 103 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 KRTAP10-3P60369 221 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 DEFB112Q30KQ8 113 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 HCP5Q6MZN7 132 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 LINC00304Q8N9R0 145 aa1.76□□□□□ -2.13
PVT1-202ENST00000512617 PRKDCP78527 4128 aaKnown RBP1.75□□□□□ -2.13
PVT1-202ENST00000512617 A0A087WTM6 91 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 M0R2N4 97 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 CAV3P56539 151 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 IGFL1Q6UW32 110 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 BRD3OSQ6XYD6 125 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 TOMM5Q8N4H5 51 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 LINC00208Q96KT6 92 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 GAFA1Q96PS6 74 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 SNURFQ9Y675 71 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 CMYA5Q8N3K9 4069 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 TRRAPQ9Y4A5 3859 aa1.75□□□□□ -2.13
PVT1-202ENST00000512617 PKD1L1Q8TDX9 2849 aa1.74□□□□□ -2.13
PVT1-202ENST00000512617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.74□□□□□ -2.13
PVT1-202ENST00000512617 M0R1W7 72 aa1.74□□□□□ -2.13
PVT1-202ENST00000512617 KRTAP10-11P60412 298 aa1.74□□□□□ -2.13
PVT1-202ENST00000512617 ZNF625Q96I27 306 aaPredicted RBP1.74□□□□□ -2.13
PVT1-202ENST00000512617 NOTCH1P46531 2555 aa1.74□□□□□ -2.13
PVT1-202ENST00000512617 TENM1Q9UKZ4 2725 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 A0A1B0GUT8 65 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 ZNF137PP52743 207 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 PRB3Q04118 309 aaPredicted RBP1.73□□□□□ -2.13
PVT1-202ENST00000512617 COX17Q14061 63 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 ATXN8Q156A1 80 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 TTTY10Q9BZA0 68 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 LINC00846Q9NV44 126 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 WNK2Q9Y3S1 2297 aa1.73□□□□□ -2.13
PVT1-202ENST00000512617 RYR3Q15413 4870 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 TRGV2A0A075B6R0 118 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 TRGV1A0A0A0MS02 117 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 H3BUX3 64 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 GDF5OSQ5U4N7 250 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 CYYR1Q96J86 154 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 FAM103A1Q9BTL3 118 aaKnown RBP1.72□□□□□ -2.13
PVT1-202ENST00000512617 NMES1Q9C002 83 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 MEGF8Q7Z7M0 2845 aa1.72□□□□□ -2.13
PVT1-202ENST00000512617 KMT2CQ8NEZ4 4911 aaKnown RBP1.72□□□□□ -2.13
PVT1-202ENST00000512617 DOCK11Q5JSL3 2073 aa1.71□□□□□ -2.13
PVT1-202ENST00000512617 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 FXYD6-FXYD2A0A087WZ82 144 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 IGKV4-1P06312 121 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 MINOS1Q5TGZ0 78 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
PVT1-202ENST00000512617 Q96NJ1 140 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 SPRR4Q96PI1 79 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 DNAH9Q9NYC9 4486 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 MGAM2Q2M2H8 2515 aa1.71□□□□□ -2.14
PVT1-202ENST00000512617 RYR2Q92736 4967 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 H0Y9P7 68 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 H3BSH0 61 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 ACYP2P14621 99 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 C10orf99Q6UWK7 81 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 NBEAL2Q6ZNJ1 2754 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 Q6ZQY7 126 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 WFDC9Q8NEX5 89 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 KRTAP2-2Q9BYT5 123 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 FXYD6Q9H0Q3 95 aa1.7□□□□□ -2.14
PVT1-202ENST00000512617 WNK1Q9H4A3 2382 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 PIN1P1O15428 100 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 NDUFB1O75438 58 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 PIGYQ3MUY2 71 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
PVT1-202ENST00000512617 PLAC8Q9NZF1 115 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 VWFP04275 2813 aa1.69□□□□□ -2.14
PVT1-202ENST00000512617 HUWE1Q7Z6Z7 4374 aaKnown RBP1.68□□□□□ -2.14
PVT1-202ENST00000512617 K7EIL1 84 aa1.68□□□□□ -2.14
PVT1-202ENST00000512617 PRB2P02812 416 aaPredicted RBP1.68□□□□□ -2.14
PVT1-202ENST00000512617 C10orf113Q5VZT2 155 aa1.68□□□□□ -2.14
PVT1-202ENST00000512617 SPATA8Q6RVD6 105 aa1.68□□□□□ -2.14
PVT1-202ENST00000512617 LEAP2Q969E1 77 aa1.68□□□□□ -2.14
PVT1-202ENST00000512617 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 TGP01266 2768 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 NDUFA3O95167 84 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 SPINK7P58062 85 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 NOTCH3Q9UM47 2321 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 HYDINQ4G0P3 5121 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 BIRC6Q9NR09 4857 aa1.67□□□□□ -2.14
PVT1-202ENST00000512617 EPPK1P58107 5090 aaKnown RBP1.66□□□□□ -2.14
PVT1-202ENST00000512617 KRTAP10-8P60410 259 aa1.66□□□□□ -2.14
PVT1-202ENST00000512617 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
PVT1-202ENST00000512617 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
PVT1-202ENST00000512617 OBSCN-AS1Q96MR7 158 aa1.66□□□□□ -2.14
PVT1-202ENST00000512617 KRTAP1-5Q9BYS1 174 aa1.66□□□□□ -2.14
PVT1-202ENST00000512617 LINC00472Q9H8W2 130 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms