RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	CDC34	P49427	236 aa	Predicted RBP	1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	RAB5B	P61020	215 aa		1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	HBB	P68871	147 aa		1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	ZNF345	Q14585	488 aa		1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	NDUFA5	Q16718	116 aa		1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	SLC51B	Q86UW2	128 aa		1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	SNX29P2	Q8IUI4	249 aa		1.05	□□□□□ -2.24
LINC01088-208	ENST00000511895	PDE6G	P18545	87 aa		1.04	□□□□□ -2.24
LINC01088-208	ENST00000511895	SULT1A1	P50225	295 aa		1.04	□□□□□ -2.24
LINC01088-208	ENST00000511895		Q6ZRX8	168 aa		1.04	□□□□□ -2.24
LINC01088-208	ENST00000511895	ATP6V1G3	Q96LB4	118 aa		1.04	□□□□□ -2.24
LINC01088-208	ENST00000511895	ZFP30	Q9Y2G7	519 aa		1.04	□□□□□ -2.24
LINC01088-208	ENST00000511895	TRBV10-2	A0A0K0K1G8	114 aa		1.03	□□□□□ -2.24
LINC01088-208	ENST00000511895	PYDC1	Q8WXC3	89 aa		1.03	□□□□□ -2.24
LINC01088-208	ENST00000511895	ANP32B	Q92688	251 aa	Known RBP	1.03	□□□□□ -2.24
LINC01088-208	ENST00000511895	MT1L	Q93083	61 aa		1.03	□□□□□ -2.24
LINC01088-208	ENST00000511895	TRBV27	A0A0K0K1C4	114 aa		1.02	□□□□□ -2.25
LINC01088-208	ENST00000511895	FCER1G	P30273	86 aa		1.02	□□□□□ -2.25
LINC01088-208	ENST00000511895	S100A11	P31949	105 aa		1.02	□□□□□ -2.25
LINC01088-208	ENST00000511895	MRPS36	P82909	103 aa	Known RBP	1.02	□□□□□ -2.25
LINC01088-208	ENST00000511895	TEX261	Q6UWH6	196 aa		1.02	□□□□□ -2.25
LINC01088-208	ENST00000511895	IGLC6	P0CF74	106 aa		1.01	□□□□□ -2.25
LINC01088-208	ENST00000511895	POLR2K	P53803	58 aa	Known RBP	1.01	□□□□□ -2.25
LINC01088-208	ENST00000511895	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	1.01	□□□□□ -2.25
LINC01088-208	ENST00000511895	CNBD2	Q96M20	576 aa		1.01	□□□□□ -2.25
LINC01088-208	ENST00000511895	AMELX	Q99217	191 aa		1.01	□□□□□ -2.25
LINC01088-208	ENST00000511895	ST20	Q9HBF5	79 aa		1.01	□□□□□ -2.25
LINC01088-208	ENST00000511895	DISC1	C4P0D8	188 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	LST1	O00453	97 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	SDC2	P34741	201 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	S100A12	P80511	92 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	TMEM229B	Q8NBD8	167 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	PRRT1	Q99946	306 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	FAM107B	Q9H098	131 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	SPANXA1	Q9NS26	97 aa		1	□□□□□ -2.25
LINC01088-208	ENST00000511895	SMIM31	A0A1B0GVY4	71 aa		0.99	□□□□□ -2.25
LINC01088-208	ENST00000511895		D6R8Y8	96 aa		0.99	□□□□□ -2.25
LINC01088-208	ENST00000511895	SSNA1	O43805	119 aa		0.99	□□□□□ -2.25
LINC01088-208	ENST00000511895	FABP9	Q0Z7S8	132 aa		0.99	□□□□□ -2.25
LINC01088-208	ENST00000511895	C9orf16	Q9BUW7	83 aa		0.99	□□□□□ -2.25
LINC01088-208	ENST00000511895	TRBV10-3	A0A0K0K1G6	114 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895		F2Z2F3	143 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	C17orf112	F2Z3M2	114 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	FXYD2	P54710	66 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	UBE2G1	P62253	170 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	RPL39	P62891	51 aa	Known RBP	0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	KRTAP6-2	Q3LI66	62 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	TMEM128	Q5BJH2	165 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	CSAG1	Q6PB30	78 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	COMMD7	Q86VX2	200 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	STX12	Q86Y82	276 aa		0.98	□□□□□ -2.25
LINC01088-208	ENST00000511895	HMGB3	O15347	200 aa	Known RBP	0.97	□□□□□ -2.25
LINC01088-208	ENST00000511895	KRTAP19-5	Q3LI72	72 aa		0.97	□□□□□ -2.25
LINC01088-208	ENST00000511895	COX7B2	Q8TF08	81 aa		0.97	□□□□□ -2.25
LINC01088-208	ENST00000511895	TMEM191A	Q9H0A3	160 aa		0.97	□□□□□ -2.25
LINC01088-208	ENST00000511895	TRBV7-7	A0A0K0K1E9	115 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895		A0A1W2PRE2	83 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	NCR3	O14931	201 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	SFT2D2	O95562	160 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	SRP19	P09132	144 aa	Known RBP	0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	GCHFR	P30047	84 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	COX17	Q14061	63 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	BATF	Q16520	125 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	LINC00299	Q6ZSB3	139 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	WDR61	Q9GZS3	305 aa	Known RBP	0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	MAP1LC3A	Q9H492	121 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	CDKN2A-AS1	Q9UH64	79 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	SCP2D1	Q9UJQ7	156 aa		0.96	□□□□□ -2.26
LINC01088-208	ENST00000511895	INMT-MINDY4	F8WBC2	141 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	AKAIN1	P0CW23	69 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	SSBP1	Q04837	148 aa	Known RBP	0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	SMIM15	Q7Z3B0	74 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	CNFN	Q9BYD5	112 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	C10orf95	Q9H7T3	257 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	TMEM167B	Q9NRX6	74 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	ERG28	Q9UKR5	140 aa		0.95	□□□□□ -2.26
LINC01088-208	ENST00000511895	KRTAP21-1	Q3LI58	79 aa		0.94	□□□□□ -2.26
LINC01088-208	ENST00000511895	TMEM141	Q96I45	108 aa		0.94	□□□□□ -2.26
LINC01088-208	ENST00000511895	C2orf88	Q9BSF0	95 aa		0.94	□□□□□ -2.26
LINC01088-208	ENST00000511895	LSM5	Q9Y4Y9	91 aa	Known RBP	0.94	□□□□□ -2.26
LINC01088-208	ENST00000511895	TEX49	A0A1B0GTD5	131 aa		0.93	□□□□□ -2.26
LINC01088-208	ENST00000511895	SIX6	O95475	246 aa		0.93	□□□□□ -2.26
LINC01088-208	ENST00000511895	IFI27	P40305	119 aa	Predicted RBP	0.93	□□□□□ -2.26
LINC01088-208	ENST00000511895	C9orf62	Q8N4C0	152 aa		0.93	□□□□□ -2.26
LINC01088-208	ENST00000511895	ATP5H	O75947	161 aa		0.92	□□□□□ -2.26
LINC01088-208	ENST00000511895	DEFB105A	Q8NG35	78 aa		0.92	□□□□□ -2.26
LINC01088-208	ENST00000511895	TPRKB	Q9Y3C4	175 aa		0.92	□□□□□ -2.26
LINC01088-208	ENST00000511895		F8WEM9	126 aa		0.91	□□□□□ -2.26
LINC01088-208	ENST00000511895	RPL35	P42766	123 aa	Known RBP	0.91	□□□□□ -2.26
LINC01088-208	ENST00000511895	SEC11A	P67812	179 aa		0.91	□□□□□ -2.26
LINC01088-208	ENST00000511895	TNFSF18	Q9UNG2	199 aa		0.91	□□□□□ -2.26
LINC01088-208	ENST00000511895		S4R3F8	94 aa		0.91	□□□□□ -2.26
LINC01088-208	ENST00000511895		A0A087WXM4	84 aa		0.9	□□□□□ -2.27
LINC01088-208	ENST00000511895	PPP1R17	O96001	155 aa		0.9	□□□□□ -2.27
LINC01088-208	ENST00000511895	BAGE2	Q86Y30	109 aa		0.9	□□□□□ -2.27
LINC01088-208	ENST00000511895	TCEAL7	Q9BRU2	100 aa		0.9	□□□□□ -2.27
LINC01088-208	ENST00000511895	TRBV20OR9-2	A0A075B6H5	130 aa		0.89	□□□□□ -2.27
LINC01088-208	ENST00000511895	TRAV23DV6	A0A075B6W5	121 aa		0.89	□□□□□ -2.27
LINC01088-208	ENST00000511895	VBP1	P61758	197 aa		0.89	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms