RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GCC2Q8IWJ2 1684 aa1.34□□□□□ -2.19
SMARCA5-202ENST00000508573 TTC28Q96AY4 2481 aa1.33□□□□□ -2.2
SMARCA5-202ENST00000508573 PKDREJQ9NTG1 2253 aa1.32□□□□□ -2.2
SMARCA5-202ENST00000508573 KNL1Q8NG31 2342 aa1.32□□□□□ -2.2
SMARCA5-202ENST00000508573 WT1-ASQ06250 92 aa1.31□□□□□ -2.2
SMARCA5-202ENST00000508573 WFDC10BQ8IUB3 73 aa1.31□□□□□ -2.2
SMARCA5-202ENST00000508573 MUC6Q6W4X9 2439 aa1.3□□□□□ -2.2
SMARCA5-202ENST00000508573 GVINP1Q7Z2Y8 2422 aa1.3□□□□□ -2.2
SMARCA5-202ENST00000508573 IGF2RP11717 2491 aa1.3□□□□□ -2.2
SMARCA5-202ENST00000508573 MEGF8Q7Z7M0 2845 aa1.3□□□□□ -2.2
SMARCA5-202ENST00000508573 CLTCL1P53675 1640 aa1.29□□□□□ -2.2
SMARCA5-202ENST00000508573 KAAG1Q9UBP8 84 aa1.29□□□□□ -2.2
SMARCA5-202ENST00000508573 POLQO75417 2590 aa1.29□□□□□ -2.2
SMARCA5-202ENST00000508573 S4R3F8 94 aa1.27□□□□□ -2.21
SMARCA5-202ENST00000508573 PCNX1Q96RV3 2341 aa1.26□□□□□ -2.21
SMARCA5-202ENST00000508573 ZNF292O60281 2723 aa1.26□□□□□ -2.21
SMARCA5-202ENST00000508573 HELZ2Q9BYK8 2649 aaKnown RBP1.25□□□□□ -2.21
SMARCA5-202ENST00000508573 F8P00451 2351 aa1.25□□□□□ -2.21
SMARCA5-202ENST00000508573 TPRP12270 2363 aaKnown RBP1.24□□□□□ -2.21
SMARCA5-202ENST00000508573 IGLV5-48A0A075B6I7 105 aa1.24□□□□□ -2.21
SMARCA5-202ENST00000508573 ABCA12Q86UK0 2595 aa1.24□□□□□ -2.21
SMARCA5-202ENST00000508573 DEFB109BQ30KR1 87 aa1.23□□□□□ -2.21
SMARCA5-202ENST00000508573 DEFB106AQ8N104 65 aa1.23□□□□□ -2.21
SMARCA5-202ENST00000508573 DSPP15924 2871 aaKnown RBP1.23□□□□□ -2.21
SMARCA5-202ENST00000508573 MMP24-AS1A0A0U1RRL7 71 aa1.22□□□□□ -2.21
SMARCA5-202ENST00000508573 H3BUA1 57 aa1.22□□□□□ -2.21
SMARCA5-202ENST00000508573 PRLHP81277 87 aa1.22□□□□□ -2.21
SMARCA5-202ENST00000508573 ABCA2Q9BZC7 2435 aa1.22□□□□□ -2.21
SMARCA5-202ENST00000508573 PDE4DIPQ5VU43 2346 aa1.21□□□□□ -2.22
SMARCA5-202ENST00000508573 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
SMARCA5-202ENST00000508573 CELSR2Q9HCU4 2923 aa1.2□□□□□ -2.22
SMARCA5-202ENST00000508573 CSMD3Q7Z407 3707 aa1.19□□□□□ -2.22
SMARCA5-202ENST00000508573 DEFB131AP59861 70 aa1.18□□□□□ -2.22
SMARCA5-202ENST00000508573 CSPG4Q6UVK1 2322 aa1.18□□□□□ -2.22
SMARCA5-202ENST00000508573 TRANK1O15050 2925 aa1.18□□□□□ -2.22
SMARCA5-202ENST00000508573 CHD9Q3L8U1 2897 aa1.17□□□□□ -2.22
SMARCA5-202ENST00000508573 RPL39P62891 51 aaKnown RBP1.17□□□□□ -2.22
SMARCA5-202ENST00000508573 POLR2KP53803 58 aaKnown RBP1.16□□□□□ -2.22
SMARCA5-202ENST00000508573 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
SMARCA5-202ENST00000508573 PIEZO1Q92508 2521 aa1.16□□□□□ -2.22
SMARCA5-202ENST00000508573 BDP1A6H8Y1 2624 aa1.13□□□□□ -2.23
SMARCA5-202ENST00000508573 ANK2Q01484 3957 aa1.12□□□□□ -2.23
SMARCA5-202ENST00000508573 RPL39LQ96EH5 51 aaKnown RBP1.12□□□□□ -2.23
SMARCA5-202ENST00000508573 ARHGAP5-AS1Q96IT6 56 aa1.11□□□□□ -2.23
SMARCA5-202ENST00000508573 SMR3AQ99954 134 aa1.11□□□□□ -2.23
SMARCA5-202ENST00000508573 ATRQ13535 2644 aa1.09□□□□□ -2.24
SMARCA5-202ENST00000508573 CHD6Q8TD26 2715 aa1.09□□□□□ -2.24
SMARCA5-202ENST00000508573 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
SMARCA5-202ENST00000508573 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
SMARCA5-202ENST00000508573 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
SMARCA5-202ENST00000508573 NOP10Q9NPE3 64 aaKnown RBP1.08□□□□□ -2.24
SMARCA5-202ENST00000508573 TENM4Q6N022 2769 aa1.08□□□□□ -2.24
SMARCA5-202ENST00000508573 SPINK1P00995 79 aa1.07□□□□□ -2.24
SMARCA5-202ENST00000508573 DEFB135Q30KP9 77 aa1.07□□□□□ -2.24
SMARCA5-202ENST00000508573 CLPSL2Q6UWE3 100 aa1.07□□□□□ -2.24
SMARCA5-202ENST00000508573 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
SMARCA5-202ENST00000508573 VWFP04275 2813 aa1.07□□□□□ -2.24
SMARCA5-202ENST00000508573 CEP290O15078 2479 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 AKAP13Q12802 2813 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 LEAP2Q969E1 77 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 HECTD1Q9ULT8 2610 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 TENM1Q9UKZ4 2725 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 SPTA1P02549 2419 aa1.06□□□□□ -2.24
SMARCA5-202ENST00000508573 PKD1L2Q7Z442 2459 aa1.04□□□□□ -2.24
SMARCA5-202ENST00000508573 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
SMARCA5-202ENST00000508573 FBN2P35556 2912 aa1.04□□□□□ -2.24
SMARCA5-202ENST00000508573 CELSR1Q9NYQ6 3014 aa1.04□□□□□ -2.24
SMARCA5-202ENST00000508573 EP300Q09472 2414 aaPredicted RBP1.04□□□□□ -2.24
SMARCA5-202ENST00000508573 A8MTW9 85 aa1.03□□□□□ -2.24
SMARCA5-202ENST00000508573 M0R2T5 61 aa1.03□□□□□ -2.24
SMARCA5-202ENST00000508573 TTTY10Q9BZA0 68 aa1.03□□□□□ -2.24
SMARCA5-202ENST00000508573 H0YGG7 62 aa1.02□□□□□ -2.25
SMARCA5-202ENST00000508573 M0QY20 66 aa1.02□□□□□ -2.25
SMARCA5-202ENST00000508573 TNXBP22105 4242 aa1.02□□□□□ -2.25
SMARCA5-202ENST00000508573 BSNQ9UPA5 3926 aa1.01□□□□□ -2.25
SMARCA5-202ENST00000508573 NCOR1O75376 2440 aa1.01□□□□□ -2.25
SMARCA5-202ENST00000508573 A0A0C4DFX4 3053 aa1□□□□□ -2.25
SMARCA5-202ENST00000508573 FAT2Q9NYQ8 4349 aa0.98□□□□□ -2.25
SMARCA5-202ENST00000508573 CHD8Q9HCK8 2581 aa0.98□□□□□ -2.25
SMARCA5-202ENST00000508573 PRM1P04553 51 aa0.98□□□□□ -2.25
SMARCA5-202ENST00000508573 TNRC18O15417 2968 aaPredicted RBP0.98□□□□□ -2.25
SMARCA5-202ENST00000508573 OTOGQ6ZRI0 2925 aa0.98□□□□□ -2.25
SMARCA5-202ENST00000508573 PRKDCP78527 4128 aaKnown RBP0.97□□□□□ -2.25
SMARCA5-202ENST00000508573 LINC01590Q5TEZ4 76 aa0.97□□□□□ -2.25
SMARCA5-202ENST00000508573 CREBBPQ92793 2442 aa0.97□□□□□ -2.25
SMARCA5-202ENST00000508573 DNAH11Q96DT5 4516 aa0.96□□□□□ -2.26
SMARCA5-202ENST00000508573 U3KQA8 63 aa0.95□□□□□ -2.26
SMARCA5-202ENST00000508573 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
SMARCA5-202ENST00000508573 TOMM7Q9P0U1 55 aa0.94□□□□□ -2.26
SMARCA5-202ENST00000508573 WNK1Q9H4A3 2382 aa0.93□□□□□ -2.26
SMARCA5-202ENST00000508573 MAP1BP46821 2468 aaKnown RBP0.93□□□□□ -2.26
SMARCA5-202ENST00000508573 UBR5O95071 2799 aaPredicted RBP0.92□□□□□ -2.26
SMARCA5-202ENST00000508573 NBASA2RRP1 2371 aa0.92□□□□□ -2.26
SMARCA5-202ENST00000508573 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
SMARCA5-202ENST00000508573 H3BSH0 61 aa0.92□□□□□ -2.26
SMARCA5-202ENST00000508573 APCP25054 2843 aa0.91□□□□□ -2.26
SMARCA5-202ENST00000508573 M0QZ58 72 aa0.91□□□□□ -2.26
SMARCA5-202ENST00000508573 SRRM2Q9UQ35 2752 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms