RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 A0A1W2PNN7 141 aa11.11□□□□□ -0.63
NUP54-205ENST00000507257 Q8N9P0 234 aaPredicted RBP11.11□□□□□ -0.63
NUP54-205ENST00000507257 CNBPP62633 177 aaKnown RBP11.1□□□□□ -0.63
NUP54-205ENST00000507257 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
NUP54-205ENST00000507257 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
NUP54-205ENST00000507257 LINC00472Q9H8W2 130 aa11.09□□□□□ -0.63
NUP54-205ENST00000507257 H0Y9J4 135 aa11.09□□□□□ -0.63
NUP54-205ENST00000507257 J3QKU1 62 aa11.07□□□□□ -0.64
NUP54-205ENST00000507257 UBE2AP49459 152 aa11.07□□□□□ -0.64
NUP54-205ENST00000507257 RPL37AP61513 92 aaKnown RBP11.07□□□□□ -0.64
NUP54-205ENST00000507257 PRLHP81277 87 aa11.07□□□□□ -0.64
NUP54-205ENST00000507257 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
NUP54-205ENST00000507257 TEP1Q99973 2627 aaKnown RBP11.06□□□□□ -0.64
NUP54-205ENST00000507257 PKD1L1Q8TDX9 2849 aa11.06□□□□□ -0.64
NUP54-205ENST00000507257 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
NUP54-205ENST00000507257 A0A096LNI7 61 aa11.03□□□□□ -0.64
NUP54-205ENST00000507257 ATRQ13535 2644 aa11.02□□□□□ -0.65
NUP54-205ENST00000507257 IGLV7-46A0A075B6I9 117 aa11.02□□□□□ -0.65
NUP54-205ENST00000507257 KMT2BQ9UMN6 2715 aaPredicted RBP11.02□□□□□ -0.65
NUP54-205ENST00000507257 LOC101927531A0A1B0GV80 90 aa11.01□□□□□ -0.65
NUP54-205ENST00000507257 FASNP49327 2511 aaKnown RBP11□□□□□ -0.65
NUP54-205ENST00000507257 Q75L30 129 aa11□□□□□ -0.65
NUP54-205ENST00000507257 MMP24-AS1A0A0U1RRL7 71 aa10.98□□□□□ -0.65
NUP54-205ENST00000507257 CHKB-CPT1BH3BT56 60 aa10.98□□□□□ -0.65
NUP54-205ENST00000507257 TENM3Q9P273 2699 aa10.98□□□□□ -0.65
NUP54-205ENST00000507257 ASB16-AS1Q495Z4 193 aa10.96□□□□□ -0.65
NUP54-205ENST00000507257 COA5Q86WW8 74 aa10.96□□□□□ -0.65
NUP54-205ENST00000507257 PRR15LQ9BU68 103 aa10.96□□□□□ -0.65
NUP54-205ENST00000507257 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.66
NUP54-205ENST00000507257 TP53AIP1Q9HCN2 124 aa10.96□□□□□ -0.66
NUP54-205ENST00000507257 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
NUP54-205ENST00000507257 CD164Q04900 197 aa10.94□□□□□ -0.66
NUP54-205ENST00000507257 ATP11AUNQ6ZP68 121 aa10.93□□□□□ -0.66
NUP54-205ENST00000507257 HELZ2Q9BYK8 2649 aaKnown RBP10.92□□□□□ -0.66
NUP54-205ENST00000507257 ANK2Q01484 3957 aa10.92□□□□□ -0.66
NUP54-205ENST00000507257 A8MU10 97 aa10.91□□□□□ -0.66
NUP54-205ENST00000507257 MOBPQ13875 183 aa10.91□□□□□ -0.66
NUP54-205ENST00000507257 DNAH3Q8TD57 4116 aa10.91□□□□□ -0.66
NUP54-205ENST00000507257 F8P00451 2351 aa10.9□□□□□ -0.66
NUP54-205ENST00000507257 C14orf177Q52M58 125 aa10.9□□□□□ -0.67
NUP54-205ENST00000507257 Q6ZR54 194 aa10.9□□□□□ -0.67
NUP54-205ENST00000507257 OTOGQ6ZRI0 2925 aa10.89□□□□□ -0.67
NUP54-205ENST00000507257 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
NUP54-205ENST00000507257 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
NUP54-205ENST00000507257 KTN1-AS1Q86SY8 53 aa10.88□□□□□ -0.67
NUP54-205ENST00000507257 PLAC8Q9NZF1 115 aa10.88□□□□□ -0.67
NUP54-205ENST00000507257 LCA10Q71F78 164 aa10.87□□□□□ -0.67
NUP54-205ENST00000507257 LINC01558Q9Y6Z2 57 aa10.87□□□□□ -0.67
NUP54-205ENST00000507257 KRTAP13-1Q8IUC0 172 aa10.85□□□□□ -0.67
NUP54-205ENST00000507257 Q96NJ1 140 aa10.85□□□□□ -0.67
NUP54-205ENST00000507257 CDC42SE1Q9NRR8 79 aa10.85□□□□□ -0.67
NUP54-205ENST00000507257 CMYA5Q8N3K9 4069 aa10.84□□□□□ -0.67
NUP54-205ENST00000507257 A6NED7 52 aa10.84□□□□□ -0.67
NUP54-205ENST00000507257 KRTAP1-5Q9BYS1 174 aa10.83□□□□□ -0.68
NUP54-205ENST00000507257 NDUFS5O43920 106 aa10.82□□□□□ -0.68
NUP54-205ENST00000507257 C8orf17Q9NRJ1 99 aa10.81□□□□□ -0.68
NUP54-205ENST00000507257 A6NN06 94 aa10.79□□□□□ -0.68
NUP54-205ENST00000507257 CHTF8P0CG12 524 aa10.79□□□□□ -0.68
NUP54-205ENST00000507257 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
NUP54-205ENST00000507257 LINC00483Q53H64 154 aa10.76□□□□□ -0.69
NUP54-205ENST00000507257 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
NUP54-205ENST00000507257 A0A1B0GVX0 72 aa10.74□□□□□ -0.69
NUP54-205ENST00000507257 BAHCC1Q9P281 2608 aa10.74□□□□□ -0.69
NUP54-205ENST00000507257 FLNBO75369 2602 aaKnown RBP10.72□□□□□ -0.69
NUP54-205ENST00000507257 DNAH10Q8IVF4 4471 aa10.72□□□□□ -0.69
NUP54-205ENST00000507257 HUWE1Q7Z6Z7 4374 aaKnown RBP10.72□□□□□ -0.69
NUP54-205ENST00000507257 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
NUP54-205ENST00000507257 HRES1P13985 223 aa10.71□□□□□ -0.69
NUP54-205ENST00000507257 MRPL34Q9BQ48 92 aaKnown RBP10.71□□□□□ -0.69
NUP54-205ENST00000507257 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
NUP54-205ENST00000507257 MAST4O15021 2626 aa10.68□□□□□ -0.7
NUP54-205ENST00000507257 TENM2Q9NT68 2774 aa10.68□□□□□ -0.7
NUP54-205ENST00000507257 RBM12B-AS1Q9P1G2 102 aa10.66□□□□□ -0.7
NUP54-205ENST00000507257 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
NUP54-205ENST00000507257 IGLV9-49A0A0B4J1Y8 123 aa10.65□□□□□ -0.7
NUP54-205ENST00000507257 CDK2AP2O75956 126 aa10.65□□□□□ -0.7
NUP54-205ENST00000507257 IGHV6-1A0A0B4J1U7 121 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 K7EIL1 84 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 C7orf65Q6ZTY9 151 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 UBE2DNLQ8IWF7 75 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 DNAH9Q9NYC9 4486 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 HECTD1Q9ULT8 2610 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 APLNQ9ULZ1 77 aa10.64□□□□□ -0.71
NUP54-205ENST00000507257 SRRM2Q9UQ35 2752 aaKnown RBP10.63□□□□□ -0.71
NUP54-205ENST00000507257 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
NUP54-205ENST00000507257 PANO1I0J062 215 aa10.6□□□□□ -0.71
NUP54-205ENST00000507257 SPACA4Q8TDM5 124 aa10.6□□□□□ -0.71
NUP54-205ENST00000507257 SPINK7P58062 85 aa10.6□□□□□ -0.71
NUP54-205ENST00000507257 LYSTQ99698 3801 aa10.6□□□□□ -0.71
NUP54-205ENST00000507257 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
NUP54-205ENST00000507257 Q6ZRN7 208 aaPredicted RBP10.56□□□□□ -0.72
NUP54-205ENST00000507257 MDFIQ99750 246 aa10.54□□□□□ -0.72
NUP54-205ENST00000507257 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
NUP54-205ENST00000507257 NBDYA0A0U1RRE5 68 aa10.53□□□□□ -0.72
NUP54-205ENST00000507257 A0A087X002 238 aa10.52□□□□□ -0.72
NUP54-205ENST00000507257 NOTCH2NLQ7Z3S9 236 aa10.52□□□□□ -0.72
NUP54-205ENST00000507257 ACYP2P14621 99 aa10.52□□□□□ -0.73
NUP54-205ENST00000507257 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.52□□□□□ -0.73
NUP54-205ENST00000507257 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
NUP54-205ENST00000507257 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms