RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CIRBPQ14011 172 aaKnown RBP2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 SERP2Q8N6R1 65 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 DSCR8Q96T75 97 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 ABCA13Q86UQ4 5058 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 SNRPGP15A8MWD9 76 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 UMAD1C9J7I0 102 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 FAUP35544 74 aaKnown RBP2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 ETDBQ3ZM63 59 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 NMSQ5H8A3 153 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 GDF5OSQ5U4N7 250 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 PATE2Q6UY27 113 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 MRPL35Q9NZE8 188 aaKnown RBP2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 FAT1Q14517 4588 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SRRM2Q9UQ35 2752 aaKnown RBP2□□□□□ -2.09
HMGB1P3-201ENST00000502802 DEFB131BA0A096LNP1 70 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 CRYM-AS1A6NIL9 109 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 CEBPZOSA8MTT3 80 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 H3BUT2 72 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 M0R2N4 97 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SPANXN1Q5VSR9 72 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2□□□□□ -2.09
HMGB1P3-201ENST00000502802 Q8N8P6 123 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 TMEM254Q8TBM7 123 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SMIM4Q8WVI0 70 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 VPS13BQ7Z7G8 4022 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 HERC1Q15751 4861 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGHV1-24A0A0C4DH33 117 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 A6NN06 94 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 A8MTW9 85 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 F2Z2F3 143 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 CCKP06307 115 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 SPART-AS1P0CW21 52 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 SMIM13P0DJ93 91 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 ROMO1P60602 79 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 WFDC2Q14508 124 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 CFAP126Q5VTH2 177 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 UNQ6190/PRO20217Q6UXQ8 127 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 LINC00643Q86TS7 51 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 FAM213BQ8TBF2 198 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 CLEC2BQ92478 149 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 RETNLBQ9BQ08 111 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 hADV29S1A0JD25 119 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 NUPR1O60356 82 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 IAPPP10997 89 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 HTN3P15516 51 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 C1orf137Q5JT78 98 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 TMEM170BQ5T4T1 132 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 CHCHD1Q96BP2 118 aaKnown RBP1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 SMIM7Q9BQ49 75 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 CYP4F30PQ9H0H9 118 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 V9GYH0 126 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 DNAH8Q96JB1 4490 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 PRB4P10163 310 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 UBE2G1P62253 170 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 RHOHQ15669 191 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 SPINK13Q1W4C9 94 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 UBE2DNLQ8IWF7 75 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 TMEM141Q96I45 108 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 NXT2Q9NPJ8 142 aaKnown RBP1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRAV13-2A0A0B4J235 113 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 NBDYA0A0U1RRE5 68 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 DEFB130BP0DP73 79 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 DEFB130AP0DP74 79 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 C1orf134Q5TEV5 83 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 RPL7L1Q6DKI1 246 aaKnown RBP1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 CYP2G1PQ6ZSU1 146 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 HIGD1BQ9P298 99 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 FLG2Q5D862 2391 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 DMBT1Q9UGM3 2413 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 COX8AP10176 69 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 HTN1P15515 57 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 TOMM5Q8N4H5 51 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 ODF3Q96PU9 254 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 NOP10Q9NPE3 64 aaKnown RBP1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 PSENENQ9NZ42 101 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 TIMM8BQ9Y5J9 83 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 SNURFQ9Y675 71 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRBV7-3A0A075B6L6 115 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 A0A0J9YY99 117 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 CCL18P55774 89 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 RBM3P98179 157 aaKnown RBP1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 LINC00269Q8N2A0 174 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 TMEM263Q8WUH6 116 aaKnown RBP1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 FAM167A-AS1Q96KT0 104 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 A0A087WSZ3 146 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 IGKV2-40A0A087WW87 121 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 A0A096LPF7 62 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 IGKV2D-26A0A0A0MRZ7 120 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRAV12-3A0A0B4J271 114 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms