RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 COL6A5A8TX70 2615 aa7.46□□□□□ -1.22
PBX1-211ENST00000498497 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
PBX1-211ENST00000498497 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
PBX1-211ENST00000498497 Q9BRP9 147 aa7.45□□□□□ -1.22
PBX1-211ENST00000498497 NBEAL1Q6ZS30 2694 aa7.44□□□□□ -1.22
PBX1-211ENST00000498497 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
PBX1-211ENST00000498497 CCL19Q99731 98 aa7.43□□□□□ -1.22
PBX1-211ENST00000498497 IGLV5-48A0A075B6I7 105 aa7.43□□□□□ -1.22
PBX1-211ENST00000498497 ATRQ13535 2644 aa7.43□□□□□ -1.22
PBX1-211ENST00000498497 KMT2BQ9UMN6 2715 aaPredicted RBP7.42□□□□□ -1.22
PBX1-211ENST00000498497 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
PBX1-211ENST00000498497 DEFB135Q30KP9 77 aa7.41□□□□□ -1.22
PBX1-211ENST00000498497 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
PBX1-211ENST00000498497 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
PBX1-211ENST00000498497 SPANXA2-OT1Q8N9U9 137 aa7.4□□□□□ -1.23
PBX1-211ENST00000498497 Q6ZR54 194 aa7.39□□□□□ -1.23
PBX1-211ENST00000498497 ZNF469Q96JG9 3925 aaPredicted RBP7.39□□□□□ -1.23
PBX1-211ENST00000498497 HRES1P13985 223 aa7.38□□□□□ -1.23
PBX1-211ENST00000498497 PRLHP81277 87 aa7.38□□□□□ -1.23
PBX1-211ENST00000498497 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
PBX1-211ENST00000498497 C9orf163Q8N9P6 203 aa7.38□□□□□ -1.23
PBX1-211ENST00000498497 FBXL19-AS1Q494R0 122 aa7.36□□□□□ -1.23
PBX1-211ENST00000498497 MAST4O15021 2626 aa7.36□□□□□ -1.23
PBX1-211ENST00000498497 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
PBX1-211ENST00000498497 Q6ZRX8 168 aa7.36□□□□□ -1.23
PBX1-211ENST00000498497 C4orf3Q8WVX3 66 aa7.36□□□□□ -1.23
PBX1-211ENST00000498497 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
PBX1-211ENST00000498497 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
PBX1-211ENST00000498497 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.23
PBX1-211ENST00000498497 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
PBX1-211ENST00000498497 K7EIL1 84 aa7.31□□□□□ -1.24
PBX1-211ENST00000498497 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
PBX1-211ENST00000498497 EGFEM1PQ0D2K5 195 aa7.31□□□□□ -1.24
PBX1-211ENST00000498497 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
PBX1-211ENST00000498497 TNP2Q05952 138 aa7.3□□□□□ -1.24
PBX1-211ENST00000498497 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
PBX1-211ENST00000498497 ITPR2Q14571 2701 aa7.29□□□□□ -1.24
PBX1-211ENST00000498497 TENM2Q9NT68 2774 aa7.29□□□□□ -1.24
PBX1-211ENST00000498497 IGKV2-24A0A0C4DH68 120 aa7.28□□□□□ -1.24
PBX1-211ENST00000498497 LELP1Q5T871 98 aa7.28□□□□□ -1.24
PBX1-211ENST00000498497 C15orf56Q8N910 161 aa7.27□□□□□ -1.24
PBX1-211ENST00000498497 NSD1Q96L73 2696 aaPredicted RBP7.27□□□□□ -1.25
PBX1-211ENST00000498497 IGLV5-37A0A075B6J1 123 aa7.27□□□□□ -1.25
PBX1-211ENST00000498497 GVQW2A0A096LPI5 108 aaPredicted RBP7.26□□□□□ -1.25
PBX1-211ENST00000498497 A0A1B0GU69 56 aa7.26□□□□□ -1.25
PBX1-211ENST00000498497 IGHV6-1A0A0B4J1U7 121 aa7.26□□□□□ -1.25
PBX1-211ENST00000498497 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
PBX1-211ENST00000498497 INAFM1C9JVW0 142 aa7.25□□□□□ -1.25
PBX1-211ENST00000498497 Q6YL49 198 aa7.25□□□□□ -1.25
PBX1-211ENST00000498497 X6R8D5 127 aa7.25□□□□□ -1.25
PBX1-211ENST00000498497 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
PBX1-211ENST00000498497 C19orf73Q9NVV2 129 aa7.24□□□□□ -1.25
PBX1-211ENST00000498497 TENM1Q9UKZ4 2725 aa7.24□□□□□ -1.25
PBX1-211ENST00000498497 PLAC8Q9NZF1 115 aa7.24□□□□□ -1.25
PBX1-211ENST00000498497 RTL8CO15255 209 aa7.23□□□□□ -1.25
PBX1-211ENST00000498497 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
PBX1-211ENST00000498497 A8MWP4 228 aa7.22□□□□□ -1.25
PBX1-211ENST00000498497 H3BPC8 53 aa7.21□□□□□ -1.25
PBX1-211ENST00000498497 PRR34Q9NV39 138 aa7.21□□□□□ -1.25
PBX1-211ENST00000498497 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
PBX1-211ENST00000498497 REG3GQ6UW15 175 aa7.19□□□□□ -1.26
PBX1-211ENST00000498497 CASC10Q5T4H9 136 aa7.18□□□□□ -1.26
PBX1-211ENST00000498497 IGLV9-49A0A0B4J1Y8 123 aa7.17□□□□□ -1.26
PBX1-211ENST00000498497 SPINK6Q6UWN8 80 aa7.16□□□□□ -1.26
PBX1-211ENST00000498497 A0A1B0GW54 56 aa7.16□□□□□ -1.26
PBX1-211ENST00000498497 SPINK1P00995 79 aa7.16□□□□□ -1.26
PBX1-211ENST00000498497 OXLD1Q5BKU9 147 aa7.16□□□□□ -1.26
PBX1-211ENST00000498497 KRTAP10-9P60411 292 aa7.15□□□□□ -1.27
PBX1-211ENST00000498497 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
PBX1-211ENST00000498497 ROMO1P60602 79 aa7.14□□□□□ -1.27
PBX1-211ENST00000498497 KRTAP7-1Q8IUC3 87 aa7.14□□□□□ -1.27
PBX1-211ENST00000498497 DNAH10OSP0CZ25 163 aa7.14□□□□□ -1.27
PBX1-211ENST00000498497 A0A087X002 238 aa7.13□□□□□ -1.27
PBX1-211ENST00000498497 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
PBX1-211ENST00000498497 UQCR11O14957 56 aa7.11□□□□□ -1.27
PBX1-211ENST00000498497 LINC00472Q9H8W2 130 aa7.11□□□□□ -1.27
PBX1-211ENST00000498497 SPART-AS1P0CW21 52 aa7.09□□□□□ -1.27
PBX1-211ENST00000498497 STAB1Q9NY15 2570 aa7.09□□□□□ -1.27
PBX1-211ENST00000498497 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
PBX1-211ENST00000498497 CDK2AP2O75956 126 aa7.08□□□□□ -1.28
PBX1-211ENST00000498497 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
PBX1-211ENST00000498497 CMC4P56277 68 aaPredicted RBP7.07□□□□□ -1.28
PBX1-211ENST00000498497 Q5W150 140 aa7.07□□□□□ -1.28
PBX1-211ENST00000498497 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
PBX1-211ENST00000498497 ACYP2P14621 99 aa7.06□□□□□ -1.28
PBX1-211ENST00000498497 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
PBX1-211ENST00000498497 CHTF8P0CG12 524 aa7.05□□□□□ -1.28
PBX1-211ENST00000498497 ZNF861PO60384 105 aa7.05□□□□□ -1.28
PBX1-211ENST00000498497 SPRR1AP35321 89 aa7.05□□□□□ -1.28
PBX1-211ENST00000498497 P0C880 135 aa7.04□□□□□ -1.28
PBX1-211ENST00000498497 STAB2Q8WWQ8 2551 aa7.03□□□□□ -1.28
PBX1-211ENST00000498497 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
PBX1-211ENST00000498497 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
PBX1-211ENST00000498497 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
PBX1-211ENST00000498497 DEFB113Q30KQ7 82 aa7.01□□□□□ -1.29
PBX1-211ENST00000498497 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
PBX1-211ENST00000498497 TGP01266 2768 aa7□□□□□ -1.29
PBX1-211ENST00000498497 DEFB131BA0A096LNP1 70 aa7□□□□□ -1.29
PBX1-211ENST00000498497 LYSTQ99698 3801 aa6.99□□□□□ -1.29
PBX1-211ENST00000498497 SMR3AQ99954 134 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms