RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
BRCA1-219ENST00000491747 NDUFC1O43677 76 aa5.99□□□□□ -1.45
BRCA1-219ENST00000491747 CNBPP62633 177 aaKnown RBP5.99□□□□□ -1.45
BRCA1-219ENST00000491747 C4orf26Q17RF5 130 aa5.99□□□□□ -1.45
BRCA1-219ENST00000491747 CAMK2N2Q96S95 79 aa5.99□□□□□ -1.45
BRCA1-219ENST00000491747 FAT1Q14517 4588 aa5.98□□□□□ -1.45
BRCA1-219ENST00000491747 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
BRCA1-219ENST00000491747 M0R378 163 aa5.98□□□□□ -1.45
BRCA1-219ENST00000491747 VPREB1P12018 145 aa5.98□□□□□ -1.45
BRCA1-219ENST00000491747 PANO1I0J062 215 aa5.98□□□□□ -1.45
BRCA1-219ENST00000491747 EPM2AB3EWF7 344 aa5.97□□□□□ -1.45
BRCA1-219ENST00000491747 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
BRCA1-219ENST00000491747 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.45
BRCA1-219ENST00000491747 SCXQ7RTU7 201 aa5.96□□□□□ -1.45
BRCA1-219ENST00000491747 F8WEM9 126 aa5.96□□□□□ -1.46
BRCA1-219ENST00000491747 LINC00528Q8N1L1 170 aa5.96□□□□□ -1.46
BRCA1-219ENST00000491747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-219ENST00000491747 CIRBP-AS1Q8TBR5 109 aa5.95□□□□□ -1.46
BRCA1-219ENST00000491747 VPS13BQ7Z7G8 4022 aa5.94□□□□□ -1.46
BRCA1-219ENST00000491747 BPY2O14599 106 aa5.94□□□□□ -1.46
BRCA1-219ENST00000491747 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-219ENST00000491747 NREPQ16612 68 aa5.94□□□□□ -1.46
BRCA1-219ENST00000491747 Q5VSD8 79 aa5.94□□□□□ -1.46
BRCA1-219ENST00000491747 CHTF8P0CG12 524 aa5.94□□□□□ -1.46
BRCA1-219ENST00000491747 Q6ZRU5 148 aa5.94□□□□□ -1.46
BRCA1-219ENST00000491747 ERC2-IT1O76042 136 aa5.93□□□□□ -1.46
BRCA1-219ENST00000491747 SMIM26A0A096LP01 95 aa5.92□□□□□ -1.46
BRCA1-219ENST00000491747 TMEM254Q8TBM7 123 aa5.92□□□□□ -1.46
BRCA1-219ENST00000491747 F8WDY8 70 aa5.92□□□□□ -1.46
BRCA1-219ENST00000491747 SYCNQ0VAF6 134 aa5.91□□□□□ -1.46
BRCA1-219ENST00000491747 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.46
BRCA1-219ENST00000491747 A0A096LNI7 61 aa5.9□□□□□ -1.46
BRCA1-219ENST00000491747 FAM229AH3BQW9 127 aa5.9□□□□□ -1.46
BRCA1-219ENST00000491747 IGKV4-1P06312 121 aa5.9□□□□□ -1.46
BRCA1-219ENST00000491747 Q6ZRP5 223 aa5.9□□□□□ -1.46
BRCA1-219ENST00000491747 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.46
BRCA1-219ENST00000491747 NKAPP1Q8N9T2 125 aa5.89□□□□□ -1.47
BRCA1-219ENST00000491747 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
BRCA1-219ENST00000491747 IGKV2-24A0A0C4DH68 120 aa5.89□□□□□ -1.47
BRCA1-219ENST00000491747 KRTAP10-4P60372 401 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-219ENST00000491747 Q8N9L7 120 aa5.89□□□□□ -1.47
BRCA1-219ENST00000491747 A0A1B0GW54 56 aa5.88□□□□□ -1.47
BRCA1-219ENST00000491747 IGLV5-48A0A075B6I7 105 aa5.88□□□□□ -1.47
BRCA1-219ENST00000491747 OCR1Q9BZK8 76 aa5.88□□□□□ -1.47
BRCA1-219ENST00000491747 PRYO14603 147 aa5.87□□□□□ -1.47
BRCA1-219ENST00000491747 FP248Q71RG6 208 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-219ENST00000491747 Q8N377 158 aa5.87□□□□□ -1.47
BRCA1-219ENST00000491747 DEFB105AQ8NG35 78 aa5.87□□□□□ -1.47
BRCA1-219ENST00000491747 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
BRCA1-219ENST00000491747 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
BRCA1-219ENST00000491747 A0A0U1RQV1 116 aa5.86□□□□□ -1.47
BRCA1-219ENST00000491747 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
BRCA1-219ENST00000491747 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
BRCA1-219ENST00000491747 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
BRCA1-219ENST00000491747 SERTAD4-AS1Q5TG53 156 aa5.84□□□□□ -1.47
BRCA1-219ENST00000491747 Q6ZRX8 168 aa5.84□□□□□ -1.47
BRCA1-219ENST00000491747 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.47
BRCA1-219ENST00000491747 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.48
BRCA1-219ENST00000491747 A0A1W2PNN7 141 aa5.83□□□□□ -1.48
BRCA1-219ENST00000491747 TLX1NBP0CAT3 122 aa5.83□□□□□ -1.48
BRCA1-219ENST00000491747 RPL37AP61513 92 aaKnown RBP5.83□□□□□ -1.48
BRCA1-219ENST00000491747 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
BRCA1-219ENST00000491747 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
BRCA1-219ENST00000491747 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
BRCA1-219ENST00000491747 PKIGQ9Y2B9 76 aa5.82□□□□□ -1.48
BRCA1-219ENST00000491747 Q8NBF4 154 aa5.81□□□□□ -1.48
BRCA1-219ENST00000491747 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
BRCA1-219ENST00000491747 A0A1W2PNM2 257 aa5.81□□□□□ -1.48
BRCA1-219ENST00000491747 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-219ENST00000491747 SMIM29Q86T20 159 aa5.81□□□□□ -1.48
BRCA1-219ENST00000491747 Q9BRP9 147 aa5.81□□□□□ -1.48
BRCA1-219ENST00000491747 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
BRCA1-219ENST00000491747 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 FAM168BA1KXE4 195 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 RPL37AP8A6NKH3 93 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 SPRR1AP35321 89 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 FLG2Q5D862 2391 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-219ENST00000491747 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
BRCA1-219ENST00000491747 PHF5AQ7RTV0 110 aaKnown RBP5.78□□□□□ -1.48
BRCA1-219ENST00000491747 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
BRCA1-219ENST00000491747 ST20-AS1Q8NBB2 130 aa5.77□□□□□ -1.49
BRCA1-219ENST00000491747 LRP1Q07954 4544 aaKnown RBP5.77□□□□□ -1.49
BRCA1-219ENST00000491747 MRPL55Q7Z7F7 128 aaKnown RBP5.77□□□□□ -1.49
BRCA1-219ENST00000491747 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
BRCA1-219ENST00000491747 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
BRCA1-219ENST00000491747 UBE2BP63146 152 aa5.76□□□□□ -1.49
BRCA1-219ENST00000491747 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
BRCA1-219ENST00000491747 DSCR10P59022 87 aa5.75□□□□□ -1.49
BRCA1-219ENST00000491747 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
BRCA1-219ENST00000491747 K7EQZ3 153 aa5.74□□□□□ -1.49
BRCA1-219ENST00000491747 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-219ENST00000491747 HCG22E2RYF7 251 aa5.73□□□□□ -1.49
BRCA1-219ENST00000491747 REG3GQ6UW15 175 aa5.73□□□□□ -1.49
BRCA1-219ENST00000491747 PSORS1C2Q9UIG4 136 aa5.73□□□□□ -1.49
BRCA1-219ENST00000491747 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
BRCA1-219ENST00000491747 hDV103S1A0JD37 113 aa5.72□□□□□ -1.49
BRCA1-219ENST00000491747 NDUFB1O75438 58 aa5.71□□□□□ -1.5
BRCA1-219ENST00000491747 HERC1Q15751 4861 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms