RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	C5orf47	Q569G3	176 aa		4.03	□□□□□ -1.76
FN1-223	ENST00000490833		Q8N1X5	172 aa		4.03	□□□□□ -1.76
FN1-223	ENST00000490833	DPH3	Q96FX2	82 aa		4.03	□□□□□ -1.76
FN1-223	ENST00000490833		A0A096LNI7	61 aa		4.02	□□□□□ -1.77
FN1-223	ENST00000490833	C20orf197	Q8N268	126 aa		4.02	□□□□□ -1.77
FN1-223	ENST00000490833	TRRAP	Q9Y4A5	3859 aa		4.01	□□□□□ -1.77
FN1-223	ENST00000490833	FAM168B	A1KXE4	195 aa		4.01	□□□□□ -1.77
FN1-223	ENST00000490833	EPM2A	B3EWF7	344 aa		4.01	□□□□□ -1.77
FN1-223	ENST00000490833		H3BPC8	53 aa		4.01	□□□□□ -1.77
FN1-223	ENST00000490833	PRB2	P02812	416 aa	Predicted RBP	4.01	□□□□□ -1.77
FN1-223	ENST00000490833	COL6A5	A8TX70	2615 aa		4.01	□□□□□ -1.77
FN1-223	ENST00000490833	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4	□□□□□ -1.77
FN1-223	ENST00000490833	IGKV2-24	A0A0C4DH68	120 aa		4	□□□□□ -1.77
FN1-223	ENST00000490833		A0A1W2PNM2	257 aa		4	□□□□□ -1.77
FN1-223	ENST00000490833	LRCOL1	A6NCL2	159 aa		4	□□□□□ -1.77
FN1-223	ENST00000490833	IGKV4-1	P06312	121 aa		4	□□□□□ -1.77
FN1-223	ENST00000490833	LINC00476	Q8WZB0	136 aa		4	□□□□□ -1.77
FN1-223	ENST00000490833	SERP1	Q9Y6X1	66 aa		4	□□□□□ -1.77
FN1-223	ENST00000490833	FAM236D	A0A1B0GTK5	79 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833		A0A1W2PNN7	141 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	C3orf84	H3BNL1	204 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	FAM236C	P0DP71	79 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	CASC10	Q5T4H9	136 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	SMIM29	Q86T20	159 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	TMEM254	Q8TBM7	123 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	HIGD2A	Q9BW72	106 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833	STAB1	Q9NY15	2570 aa		3.99	□□□□□ -1.77
FN1-223	ENST00000490833		M0R2N4	97 aa		3.98	□□□□□ -1.77
FN1-223	ENST00000490833	MP68	P56378	58 aa		3.98	□□□□□ -1.77
FN1-223	ENST00000490833	KRTAP7-1	Q8IUC3	87 aa		3.98	□□□□□ -1.77
FN1-223	ENST00000490833	OCR1	Q9BZK8	76 aa		3.98	□□□□□ -1.77
FN1-223	ENST00000490833	HCG22	E2RYF7	251 aa		3.97	□□□□□ -1.77
FN1-223	ENST00000490833	IGFL1	Q6UW32	110 aa		3.97	□□□□□ -1.77
FN1-223	ENST00000490833	ST20-AS1	Q8NBB2	130 aa		3.97	□□□□□ -1.77
FN1-223	ENST00000490833		A0A087WTM6	91 aa		3.96	□□□□□ -1.78
FN1-223	ENST00000490833		H7BZZ5	65 aa		3.96	□□□□□ -1.78
FN1-223	ENST00000490833	C1orf134	Q5TEV5	83 aa		3.96	□□□□□ -1.78
FN1-223	ENST00000490833		Q6ZRN7	208 aa	Predicted RBP	3.96	□□□□□ -1.78
FN1-223	ENST00000490833	SPACA4	Q8TDM5	124 aa		3.96	□□□□□ -1.78
FN1-223	ENST00000490833	KRTAP1-5	Q9BYS1	174 aa		3.96	□□□□□ -1.78
FN1-223	ENST00000490833	TP53AIP1	Q9HCN2	124 aa		3.96	□□□□□ -1.78
FN1-223	ENST00000490833	SMIM26	A0A096LP01	95 aa		3.95	□□□□□ -1.78
FN1-223	ENST00000490833	LCE6A	A0A183	80 aa		3.95	□□□□□ -1.78
FN1-223	ENST00000490833	LINC00483	Q53H64	154 aa		3.95	□□□□□ -1.78
FN1-223	ENST00000490833	PLAC8	Q9NZF1	115 aa		3.95	□□□□□ -1.78
FN1-223	ENST00000490833	DNAH3	Q8TD57	4116 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833		A0A087WSZ3	146 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833		A0A0U1RQV1	116 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833	hDV103S1	A0JD37	113 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833		A8MWP4	228 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833	CDK2AP2	O75956	126 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833	PRLH	P81277	87 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833		Q6ZR54	194 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833	SCX	Q7RTU7	201 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833	PHF5A	Q7RTV0	110 aa	Known RBP	3.94	□□□□□ -1.78
FN1-223	ENST00000490833	SVIP	Q8NHG7	77 aa		3.94	□□□□□ -1.78
FN1-223	ENST00000490833	ZNF861P	O60384	105 aa		3.93	□□□□□ -1.78
FN1-223	ENST00000490833	DSCR10	P59022	87 aa		3.93	□□□□□ -1.78
FN1-223	ENST00000490833	CD164	Q04900	197 aa		3.93	□□□□□ -1.78
FN1-223	ENST00000490833	KRTAP13-1	Q8IUC0	172 aa		3.93	□□□□□ -1.78
FN1-223	ENST00000490833	PRR15	Q8IV56	129 aa		3.93	□□□□□ -1.78
FN1-223	ENST00000490833	PKD1L1	Q8TDX9	2849 aa		3.92	□□□□□ -1.78
FN1-223	ENST00000490833	NOTCH1	P46531	2555 aa		3.92	□□□□□ -1.78
FN1-223	ENST00000490833	IGLV5-52	A0A0A0MRZ9	124 aa		3.92	□□□□□ -1.78
FN1-223	ENST00000490833	RTL8C	O15255	209 aa		3.92	□□□□□ -1.78
FN1-223	ENST00000490833	SSBP3-AS1	Q7Z2R9	100 aa		3.92	□□□□□ -1.78
FN1-223	ENST00000490833	WWC2-AS2	Q96NR7	200 aa		3.92	□□□□□ -1.78
FN1-223	ENST00000490833	MGAM2	Q2M2H8	2515 aa		3.91	□□□□□ -1.78
FN1-223	ENST00000490833	MOBP	Q13875	183 aa		3.91	□□□□□ -1.78
FN1-223	ENST00000490833	CASC2	Q6XLA1	102 aa		3.91	□□□□□ -1.78
FN1-223	ENST00000490833	LINC00472	Q9H8W2	130 aa		3.91	□□□□□ -1.78
FN1-223	ENST00000490833	TENM3	Q9P273	2699 aa		3.9	□□□□□ -1.78
FN1-223	ENST00000490833	ANK2	Q01484	3957 aa		3.9	□□□□□ -1.79
FN1-223	ENST00000490833		K7EQZ3	153 aa		3.9	□□□□□ -1.79
FN1-223	ENST00000490833	SPANXA2-OT1	Q8N9U9	137 aa		3.9	□□□□□ -1.79
FN1-223	ENST00000490833	SNURF	Q9Y675	71 aa		3.9	□□□□□ -1.79
FN1-223	ENST00000490833		V9GYY9	64 aa		3.9	□□□□□ -1.79
FN1-223	ENST00000490833	CHTF8	P0CG12	524 aa		3.89	□□□□□ -1.79
FN1-223	ENST00000490833		Q8N9L7	120 aa		3.89	□□□□□ -1.79
FN1-223	ENST00000490833	ASB16-AS1	Q495Z4	193 aa		3.88	□□□□□ -1.79
FN1-223	ENST00000490833	CYP4F30P	Q9H0H9	118 aa		3.88	□□□□□ -1.79
FN1-223	ENST00000490833	FAM30A	Q9NZY2	134 aa		3.88	□□□□□ -1.79
FN1-223	ENST00000490833	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.87	□□□□□ -1.79
FN1-223	ENST00000490833	FAM229B	Q4G0N7	80 aa		3.87	□□□□□ -1.79
FN1-223	ENST00000490833	PSORS1C2	Q9UIG4	136 aa		3.87	□□□□□ -1.79
FN1-223	ENST00000490833	TG	P01266	2768 aa		3.86	□□□□□ -1.79
FN1-223	ENST00000490833	C8orf87	E5RJ46	101 aa		3.86	□□□□□ -1.79
FN1-223	ENST00000490833	IGLV7-43	P04211	117 aa		3.86	□□□□□ -1.79
FN1-223	ENST00000490833	ZCCHC13	Q8WW36	166 aa	Known RBP	3.86	□□□□□ -1.79
FN1-223	ENST00000490833	CYSTM1	Q9H1C7	97 aa		3.86	□□□□□ -1.79
FN1-223	ENST00000490833	CMYA5	Q8N3K9	4069 aa		3.86	□□□□□ -1.79
FN1-223	ENST00000490833	TRAV22	A0A0B4J277	110 aa		3.85	□□□□□ -1.79
FN1-223	ENST00000490833	LY6G6C	O95867	125 aa		3.85	□□□□□ -1.79
FN1-223	ENST00000490833		Q5XG85	94 aa		3.85	□□□□□ -1.79
FN1-223	ENST00000490833	STAB2	Q8WWQ8	2551 aa		3.84	□□□□□ -1.79
FN1-223	ENST00000490833	MEGF8	Q7Z7M0	2845 aa		3.84	□□□□□ -1.79
FN1-223	ENST00000490833	IGLV9-49	A0A0B4J1Y8	123 aa		3.84	□□□□□ -1.79
FN1-223	ENST00000490833		A0A1B0GVX0	72 aa		3.84	□□□□□ -1.79
FN1-223	ENST00000490833	C1orf195	Q5TG92	126 aa		3.84	□□□□□ -1.79
FN1-223	ENST00000490833		H0Y9P7	68 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms