RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 C5orf17Q8NAS9 161 aa1.68□□□□□ -2.14
SSX2IP-208ENST00000490476 LINC00526Q96FQ7 95 aa1.68□□□□□ -2.14
SSX2IP-208ENST00000490476 CIB3Q96Q77 187 aaPredicted RBP1.68□□□□□ -2.14
SSX2IP-208ENST00000490476 FXYD6-FXYD2A0A087WZ82 144 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 CCDC179H3BU77 68 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 TMEM256-PLSCR3K7ERE1 68 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 TCRAP04437 139 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 CD2P06729 351 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 SPINK8P0C7L1 97 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 PYYP10082 97 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 CATR1Q13166 79 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 CFAP126Q5VTH2 177 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 IZUMO2Q6UXV1 221 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
SSX2IP-208ENST00000490476 TRBV20-1A0A075B6N2 111 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 SLC25A4P12235 298 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 PDE6HQ13956 83 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 TMEM91Q6ZNR0 172 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 KCNRGQ8N5I3 272 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 NPCDR1Q9BY65 106 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 NPVFQ9HCQ7 196 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 COMMD3Q9UBI1 195 aa1.66□□□□□ -2.14
SSX2IP-208ENST00000490476 TRBV6-8A0A0A6YYG3 113 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 TRAV12-1A0A0B4J245 112 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 FXYD1O00168 92 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 UQCRQO14949 82 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 HIST1H2BKO60814 126 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 HIST1H2BJP06899 126 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 IFITM1P13164 125 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 RPS29P62273 56 aaKnown RBP1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 TEN1Q86WV5 123 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 OR2T35Q8NGX2 323 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 COPS9Q8WXC6 57 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 PRELID3AQ96N28 172 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 SEC11CQ9BY50 192 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 AGPAT4-IT1Q9H0P7 198 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 PRO1933Q9H354 126 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 C14orf132Q9NPU4 83 aa1.65□□□□□ -2.15
SSX2IP-208ENST00000490476 SMIM31A0A1B0GVY4 71 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 HYPMO75409 117 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 HBDP02042 147 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 LSM3P62310 102 aaKnown RBP1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 PYY3Q5JQD4 70 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 LINC01545Q5VT33 79 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 MRPL54Q6P161 138 aaKnown RBP1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 ATOH7Q8N100 152 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 SVBPQ8N300 66 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 OR5AK2Q8NH90 309 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 NAA60Q9H7X0 242 aa1.64□□□□□ -2.15
SSX2IP-208ENST00000490476 TCRBV3S1A0A5B6 114 aa1.63□□□□□ -2.15
SSX2IP-208ENST00000490476 M0R129 80 aa1.63□□□□□ -2.15
SSX2IP-208ENST00000490476 TRACP01848 142 aa1.63□□□□□ -2.15
SSX2IP-208ENST00000490476 MRPS36P82909 103 aaKnown RBP1.63□□□□□ -2.15
SSX2IP-208ENST00000490476 SAR1AQ9NR31 198 aa1.63□□□□□ -2.15
SSX2IP-208ENST00000490476 SNRPGP15A8MWD9 76 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 K7ERJ3 54 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 BCE1O60756 84 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 TPT1P13693 172 aaKnown RBP1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 UBE2D2P62837 147 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 CLLU1Q5K131 121 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 Q6AWC8 147 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 TMEM254Q8TBM7 123 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 RAB37Q96AX2 223 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 ATG5Q9H1Y0 275 aa1.62□□□□□ -2.15
SSX2IP-208ENST00000490476 C3orf85A0A1B0GTC6 90 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 C9orf153Q5TBE3 101 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 AQP10Q96PS8 301 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 VAMP8Q9BV40 100 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 LSM2Q9Y333 95 aaKnown RBP1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 AP4S1Q9Y587 144 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 SERP1Q9Y6X1 66 aa1.61□□□□□ -2.15
SSX2IP-208ENST00000490476 J3QLW9 94 aa1.6□□□□□ -2.15
SSX2IP-208ENST00000490476 IL7P13232 177 aa1.6□□□□□ -2.15
SSX2IP-208ENST00000490476 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
SSX2IP-208ENST00000490476 Q6ZUT4 128 aa1.6□□□□□ -2.15
SSX2IP-208ENST00000490476 CHCHD1Q96BP2 118 aaKnown RBP1.6□□□□□ -2.15
SSX2IP-208ENST00000490476 NMBP08949 121 aa1.59□□□□□ -2.15
SSX2IP-208ENST00000490476 MIC13Q5XKP0 118 aa1.59□□□□□ -2.15
SSX2IP-208ENST00000490476 PATE2Q6UY27 113 aa1.59□□□□□ -2.15
SSX2IP-208ENST00000490476 H3BQ15 152 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 LYRM1O43325 122 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 MT-ATP8P03928 68 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 CD3DP04234 171 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 FABP4P15090 132 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 CKS2P33552 79 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 FAM74A1Q5RGS3 127 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 ATP11AUNQ6ZP68 121 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 CDC42SE1Q9NRR8 79 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 TPRKBQ9Y3C4 175 aa1.58□□□□□ -2.16
SSX2IP-208ENST00000490476 SNCGO76070 127 aa1.57□□□□□ -2.16
SSX2IP-208ENST00000490476 NDUFB6O95139 128 aa1.57□□□□□ -2.16
SSX2IP-208ENST00000490476 CFDP00746 253 aaPredicted RBP1.57□□□□□ -2.16
SSX2IP-208ENST00000490476 NPC2P61916 151 aa1.57□□□□□ -2.16
SSX2IP-208ENST00000490476 PEA15Q15121 130 aa1.57□□□□□ -2.16
SSX2IP-208ENST00000490476 IQCJQ1A5X6 159 aa1.57□□□□□ -2.16
SSX2IP-208ENST00000490476 ZNF818PQ6ZRF7 136 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms