RNA–Protein interactions for RNA: ENST00000489491.1

PDZD8-204, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 289 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-204ENST00000489491 DEFB109BQ30KR1 87 aa0.59□□□□□ -2.31
PDZD8-204ENST00000489491 SPINK6Q6UWN8 80 aa0.59□□□□□ -2.31
PDZD8-204ENST00000489491 BSNQ9UPA5 3926 aa0.59□□□□□ -2.32
PDZD8-204ENST00000489491 KIAA0586Q9BVV6 1533 aa0.59□□□□□ -2.32
PDZD8-204ENST00000489491 TPRP12270 2363 aaKnown RBP0.59□□□□□ -2.32
PDZD8-204ENST00000489491 FAT2Q9NYQ8 4349 aa0.58□□□□□ -2.32
PDZD8-204ENST00000489491 ABCA5Q8WWZ7 1642 aa0.58□□□□□ -2.32
PDZD8-204ENST00000489491 NRXN3Q9Y4C0 1643 aa0.58□□□□□ -2.32
PDZD8-204ENST00000489491 PRH1P02810 166 aa0.58□□□□□ -2.32
PDZD8-204ENST00000489491 AKAP6Q13023 2319 aa0.57□□□□□ -2.32
PDZD8-204ENST00000489491 DEFB130BP0DP73 79 aa0.57□□□□□ -2.32
PDZD8-204ENST00000489491 DEFB130AP0DP74 79 aa0.57□□□□□ -2.32
PDZD8-204ENST00000489491 IAPPP10997 89 aa0.57□□□□□ -2.32
PDZD8-204ENST00000489491 H0YGX0 51 aa0.56□□□□□ -2.32
PDZD8-204ENST00000489491 TNXBP22105 4242 aa0.56□□□□□ -2.32
PDZD8-204ENST00000489491 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
PDZD8-204ENST00000489491 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
PDZD8-204ENST00000489491 UNC79Q9P2D8 2635 aa0.55□□□□□ -2.32
PDZD8-204ENST00000489491 MACF1Q9UPN3 7388 aaKnown RBP0.55□□□□□ -2.32
PDZD8-204ENST00000489491 LINC01546A6NGU7 62 aa0.55□□□□□ -2.32
PDZD8-204ENST00000489491 RPS27P42677 84 aaKnown RBP0.55□□□□□ -2.32
PDZD8-204ENST00000489491 MINOS1Q5TGZ0 78 aa0.55□□□□□ -2.32
PDZD8-204ENST00000489491 RPS27LQ71UM5 84 aaKnown RBP0.55□□□□□ -2.32
PDZD8-204ENST00000489491 A0A1B0GUL6 1792 aa0.55□□□□□ -2.32
PDZD8-204ENST00000489491 SMIM27A0A1W2PRY6 76 aa0.54□□□□□ -2.32
PDZD8-204ENST00000489491 C6orf48Q9UBA6 75 aa0.54□□□□□ -2.32
PDZD8-204ENST00000489491 HECTD1Q9ULT8 2610 aa0.54□□□□□ -2.32
PDZD8-204ENST00000489491 ZFYVE26Q68DK2 2539 aa0.54□□□□□ -2.32
PDZD8-204ENST00000489491 PKD1L1Q8TDX9 2849 aa0.53□□□□□ -2.32
PDZD8-204ENST00000489491 WNK2Q9Y3S1 2297 aa0.53□□□□□ -2.32
PDZD8-204ENST00000489491 KNL1Q8NG31 2342 aa0.53□□□□□ -2.32
PDZD8-204ENST00000489491 TMEM167BQ9NRX6 74 aa0.53□□□□□ -2.32
PDZD8-204ENST00000489491 ABCA2Q9BZC7 2435 aa0.53□□□□□ -2.33
PDZD8-204ENST00000489491 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
PDZD8-204ENST00000489491 SPTA1P02549 2419 aa0.52□□□□□ -2.33
PDZD8-204ENST00000489491 LINC00308Q8TCZ7 52 aa0.52□□□□□ -2.33
PDZD8-204ENST00000489491 ABRACLQ9P1F3 81 aa0.52□□□□□ -2.33
PDZD8-204ENST00000489491 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
PDZD8-204ENST00000489491 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
PDZD8-204ENST00000489491 ANKRD36CQ5JPF3 1778 aa0.52□□□□□ -2.33
PDZD8-204ENST00000489491 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
PDZD8-204ENST00000489491 IQGAP2Q13576 1575 aa0.51□□□□□ -2.33
PDZD8-204ENST00000489491 TOMM5Q8N4H5 51 aa0.51□□□□□ -2.33
PDZD8-204ENST00000489491 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
PDZD8-204ENST00000489491 KMT2AQ03164 3969 aa0.5□□□□□ -2.33
PDZD8-204ENST00000489491 SPINK1P00995 79 aa0.5□□□□□ -2.33
PDZD8-204ENST00000489491 WT1-ASQ06250 92 aa0.5□□□□□ -2.33
PDZD8-204ENST00000489491 TNRC18O15417 2968 aaPredicted RBP0.5□□□□□ -2.33
PDZD8-204ENST00000489491 CDC42BPAQ5VT25 1732 aa0.5□□□□□ -2.33
PDZD8-204ENST00000489491 LYSTQ99698 3801 aa0.49□□□□□ -2.33
PDZD8-204ENST00000489491 TOP2AP11388 1531 aaKnown RBP0.49□□□□□ -2.33
PDZD8-204ENST00000489491 CHD8Q9HCK8 2581 aa0.49□□□□□ -2.33
PDZD8-204ENST00000489491 U3KQA8 63 aa0.49□□□□□ -2.33
PDZD8-204ENST00000489491 IGF2RP11717 2491 aa0.48□□□□□ -2.33
PDZD8-204ENST00000489491 CELSR1Q9NYQ6 3014 aa0.47□□□□□ -2.33
PDZD8-204ENST00000489491 S4R3F8 94 aa0.47□□□□□ -2.33
PDZD8-204ENST00000489491 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
PDZD8-204ENST00000489491 PDE4DIPQ5VU43 2346 aa0.47□□□□□ -2.33
PDZD8-204ENST00000489491 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
PDZD8-204ENST00000489491 IQGAP1P46940 1657 aa0.46□□□□□ -2.34
PDZD8-204ENST00000489491 LMO7Q8WWI1 1683 aa0.46□□□□□ -2.34
PDZD8-204ENST00000489491 A0A0C4DFX4 3053 aa0.46□□□□□ -2.34
PDZD8-204ENST00000489491 PRM1P04553 51 aa0.46□□□□□ -2.34
PDZD8-204ENST00000489491 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
PDZD8-204ENST00000489491 VPS13BQ7Z7G8 4022 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 EP300Q09472 2414 aaPredicted RBP0.45□□□□□ -2.34
PDZD8-204ENST00000489491 PDZD2O15018 2839 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 M0R2T5 61 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 PRLHP81277 87 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 PCNX1Q96RV3 2341 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 FAM208AQ9UK61 1670 aaKnown RBP0.45□□□□□ -2.34
PDZD8-204ENST00000489491 MAP1BP46821 2468 aaKnown RBP0.45□□□□□ -2.34
PDZD8-204ENST00000489491 NCOR1O75376 2440 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 NF1P21359 2839 aa0.45□□□□□ -2.34
PDZD8-204ENST00000489491 CACNA1AO00555 2505 aa0.44□□□□□ -2.34
PDZD8-204ENST00000489491 DEFB135Q30KP9 77 aa0.44□□□□□ -2.34
PDZD8-204ENST00000489491 KIF21BO75037 1637 aa0.44□□□□□ -2.34
PDZD8-204ENST00000489491 NFAT5O94916 1531 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 DSTQ03001 7570 aaKnown RBP0.43□□□□□ -2.34
PDZD8-204ENST00000489491 CSPG4Q6UVK1 2322 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 CREBBPQ92793 2442 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 H3BUA1 57 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 TFF3Q07654 80 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 DEFB106AQ8N104 65 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 TIMM8BQ9Y5J9 83 aaPredicted RBP0.43□□□□□ -2.34
PDZD8-204ENST00000489491 UBR5O95071 2799 aaPredicted RBP0.43□□□□□ -2.34
PDZD8-204ENST00000489491 ATP7AQ04656 1500 aa0.43□□□□□ -2.34
PDZD8-204ENST00000489491 LPAP08519 4548 aa0.42□□□□□ -2.34
PDZD8-204ENST00000489491 NEBP20929 6669 aa0.42□□□□□ -2.34
PDZD8-204ENST00000489491 SMIM2Q9BVW6 85 aa0.42□□□□□ -2.34
PDZD8-204ENST00000489491 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
PDZD8-204ENST00000489491 FLNCQ14315 2725 aa0.41□□□□□ -2.34
PDZD8-204ENST00000489491 ZZEF1O43149 2961 aa0.41□□□□□ -2.34
PDZD8-204ENST00000489491 CEP290O15078 2479 aa0.41□□□□□ -2.34
PDZD8-204ENST00000489491 HIVEP3Q5T1R4 2406 aa0.4□□□□□ -2.34
PDZD8-204ENST00000489491 SRRM2Q9UQ35 2752 aaKnown RBP0.4□□□□□ -2.34
PDZD8-204ENST00000489491 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.34
PDZD8-204ENST00000489491 TACC2O95359 2948 aa0.4□□□□□ -2.35
PDZD8-204ENST00000489491 PKD1P98161 4303 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms