RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 A6NN06 94 aa12.43□□□□□ -0.42
HMG20B-213ENST00000488973 TENM3Q9P273 2699 aa12.42□□□□□ -0.42
HMG20B-213ENST00000488973 CASC10Q5T4H9 136 aa12.42□□□□□ -0.42
HMG20B-213ENST00000488973 ANK2Q01484 3957 aa12.41□□□□□ -0.42
HMG20B-213ENST00000488973 LIMD2Q9BT23 127 aa12.41□□□□□ -0.42
HMG20B-213ENST00000488973 BAHCC1Q9P281 2608 aa12.4□□□□□ -0.42
HMG20B-213ENST00000488973 REG3GQ6UW15 175 aa12.4□□□□□ -0.42
HMG20B-213ENST00000488973 DNAH1Q9P2D7 4330 aa12.4□□□□□ -0.42
HMG20B-213ENST00000488973 HCG22E2RYF7 251 aa12.4□□□□□ -0.42
HMG20B-213ENST00000488973 LINC00476Q8WZB0 136 aa12.4□□□□□ -0.42
HMG20B-213ENST00000488973 CHKB-CPT1BH3BT56 60 aa12.39□□□□□ -0.43
HMG20B-213ENST00000488973 C8orf87E5RJ46 101 aa12.38□□□□□ -0.43
HMG20B-213ENST00000488973 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.37□□□□□ -0.43
HMG20B-213ENST00000488973 C7orf65Q6ZTY9 151 aa12.37□□□□□ -0.43
HMG20B-213ENST00000488973 SPTSSBQ8NFR3 76 aa12.37□□□□□ -0.43
HMG20B-213ENST00000488973 IGFL1Q6UW32 110 aa12.34□□□□□ -0.43
HMG20B-213ENST00000488973 NDUFB1O75438 58 aa12.33□□□□□ -0.43
HMG20B-213ENST00000488973 LCA10Q71F78 164 aa12.33□□□□□ -0.44
HMG20B-213ENST00000488973 Q8N9P0 234 aaPredicted RBP12.31□□□□□ -0.44
HMG20B-213ENST00000488973 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
HMG20B-213ENST00000488973 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
HMG20B-213ENST00000488973 STAB1Q9NY15 2570 aa12.31□□□□□ -0.44
HMG20B-213ENST00000488973 Q75L30 129 aa12.29□□□□□ -0.44
HMG20B-213ENST00000488973 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
HMG20B-213ENST00000488973 A0A1W2PNN7 141 aa12.28□□□□□ -0.44
HMG20B-213ENST00000488973 DNAH3Q8TD57 4116 aa12.26□□□□□ -0.45
HMG20B-213ENST00000488973 H3BS24 57 aa12.26□□□□□ -0.45
HMG20B-213ENST00000488973 A0A087WSZ3 146 aa12.25□□□□□ -0.45
HMG20B-213ENST00000488973 DEFB116Q30KQ4 102 aa12.25□□□□□ -0.45
HMG20B-213ENST00000488973 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
HMG20B-213ENST00000488973 PRR15LQ9BU68 103 aa12.25□□□□□ -0.45
HMG20B-213ENST00000488973 MP68P56378 58 aa12.24□□□□□ -0.45
HMG20B-213ENST00000488973 CDC42SE1Q9NRR8 79 aa12.24□□□□□ -0.45
HMG20B-213ENST00000488973 MAST4O15021 2626 aa12.24□□□□□ -0.45
HMG20B-213ENST00000488973 PRLHP81277 87 aa12.23□□□□□ -0.45
HMG20B-213ENST00000488973 WFDC13Q8IUB5 93 aa12.23□□□□□ -0.45
HMG20B-213ENST00000488973 PRR4Q16378 134 aa12.23□□□□□ -0.45
HMG20B-213ENST00000488973 LOC101927531A0A1B0GV80 90 aa12.22□□□□□ -0.45
HMG20B-213ENST00000488973 A0A096LNI7 61 aa12.21□□□□□ -0.46
HMG20B-213ENST00000488973 A6NED7 52 aa12.2□□□□□ -0.46
HMG20B-213ENST00000488973 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
HMG20B-213ENST00000488973 COL6A5A8TX70 2615 aa12.19□□□□□ -0.46
HMG20B-213ENST00000488973 SPANXA2-OT1Q8N9U9 137 aa12.18□□□□□ -0.46
HMG20B-213ENST00000488973 LINC00208Q96KT6 92 aa12.18□□□□□ -0.46
HMG20B-213ENST00000488973 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
HMG20B-213ENST00000488973 CNBPP62633 177 aaKnown RBP12.17□□□□□ -0.46
HMG20B-213ENST00000488973 K7EIL1 84 aa12.16□□□□□ -0.46
HMG20B-213ENST00000488973 RPL37AP61513 92 aaKnown RBP12.16□□□□□ -0.46
HMG20B-213ENST00000488973 H3BPC8 53 aa12.15□□□□□ -0.46
HMG20B-213ENST00000488973 SPRR1BP22528 89 aa12.14□□□□□ -0.47
HMG20B-213ENST00000488973 PRB2P02812 416 aaPredicted RBP12.13□□□□□ -0.47
HMG20B-213ENST00000488973 CASC2Q6XLA1 102 aa12.13□□□□□ -0.47
HMG20B-213ENST00000488973 H0Y9J4 135 aa12.12□□□□□ -0.47
HMG20B-213ENST00000488973 MOBPQ13875 183 aa12.11□□□□□ -0.47
HMG20B-213ENST00000488973 H0Y9P7 68 aa12.11□□□□□ -0.47
HMG20B-213ENST00000488973 A8MWP4 228 aa12.1□□□□□ -0.47
HMG20B-213ENST00000488973 LINC00472Q9H8W2 130 aa12.1□□□□□ -0.47
HMG20B-213ENST00000488973 MDFIQ99750 246 aa12.09□□□□□ -0.47
HMG20B-213ENST00000488973 DNAH10Q8IVF4 4471 aa12.09□□□□□ -0.47
HMG20B-213ENST00000488973 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
HMG20B-213ENST00000488973 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
HMG20B-213ENST00000488973 KRTAP11-1Q8IUC1 163 aa12.06□□□□□ -0.48
HMG20B-213ENST00000488973 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
HMG20B-213ENST00000488973 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
HMG20B-213ENST00000488973 C9orf163Q8N9P6 203 aa12.01□□□□□ -0.49
HMG20B-213ENST00000488973 CHTF8P0CG12 524 aa12□□□□□ -0.49
HMG20B-213ENST00000488973 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
HMG20B-213ENST00000488973 DNAH9Q9NYC9 4486 aa11.99□□□□□ -0.49
HMG20B-213ENST00000488973 MMP24-AS1A0A0U1RRL7 71 aa11.97□□□□□ -0.49
HMG20B-213ENST00000488973 LINC01554Q52M75 96 aa11.97□□□□□ -0.49
HMG20B-213ENST00000488973 SRRM2Q9UQ35 2752 aaKnown RBP11.97□□□□□ -0.49
HMG20B-213ENST00000488973 PRR26Q8N8Z3 221 aa11.97□□□□□ -0.49
HMG20B-213ENST00000488973 LINC01558Q9Y6Z2 57 aa11.96□□□□□ -0.5
HMG20B-213ENST00000488973 PLAC8Q9NZF1 115 aa11.95□□□□□ -0.5
HMG20B-213ENST00000488973 LYSTQ99698 3801 aa11.95□□□□□ -0.5
HMG20B-213ENST00000488973 MGAM2Q2M2H8 2515 aa11.94□□□□□ -0.5
HMG20B-213ENST00000488973 LINC00313P59037 77 aa11.94□□□□□ -0.5
HMG20B-213ENST00000488973 COA5Q86WW8 74 aa11.92□□□□□ -0.5
HMG20B-213ENST00000488973 KRTAP13-1Q8IUC0 172 aa11.91□□□□□ -0.5
HMG20B-213ENST00000488973 UBE2DNLQ8IWF7 75 aa11.91□□□□□ -0.5
HMG20B-213ENST00000488973 IGLV7-46A0A075B6I9 117 aa11.9□□□□□ -0.5
HMG20B-213ENST00000488973 ASB16-AS1Q495Z4 193 aa11.88□□□□□ -0.51
HMG20B-213ENST00000488973 TP53AIP1Q9HCN2 124 aa11.87□□□□□ -0.51
HMG20B-213ENST00000488973 TENM2Q9NT68 2774 aa11.87□□□□□ -0.51
HMG20B-213ENST00000488973 Q96NJ1 140 aa11.86□□□□□ -0.51
HMG20B-213ENST00000488973 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
HMG20B-213ENST00000488973 PLA2G1BP04054 148 aaKnown RBP11.85□□□□□ -0.51
HMG20B-213ENST00000488973 PRAC1Q96KF2 57 aa11.82□□□□□ -0.52
HMG20B-213ENST00000488973 SPINK7P58062 85 aa11.81□□□□□ -0.52
HMG20B-213ENST00000488973 DYNC2H1Q8NCM8 4307 aaKnown RBP11.8□□□□□ -0.52
HMG20B-213ENST00000488973 Q6ZR54 194 aa11.8□□□□□ -0.52
HMG20B-213ENST00000488973 A0A087X002 238 aa11.8□□□□□ -0.52
HMG20B-213ENST00000488973 PANO1I0J062 215 aa11.8□□□□□ -0.52
HMG20B-213ENST00000488973 C8orf17Q9NRJ1 99 aa11.79□□□□□ -0.52
HMG20B-213ENST00000488973 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
HMG20B-213ENST00000488973 LINC00483Q53H64 154 aa11.77□□□□□ -0.52
HMG20B-213ENST00000488973 PCOTHQ58A44 107 aa11.77□□□□□ -0.52
HMG20B-213ENST00000488973 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
HMG20B-213ENST00000488973 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
HMG20B-213ENST00000488973 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms