RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 H1FX-AS1Q4G0G2 97 aa1.24□□□□□ -2.21
KDM3A-213ENST00000488971 COX14Q96I36 57 aa1.24□□□□□ -2.21
KDM3A-213ENST00000488971 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
KDM3A-213ENST00000488971 IGLV5-48A0A075B6I7 105 aa1.23□□□□□ -2.21
KDM3A-213ENST00000488971 K7EIM0 57 aa1.23□□□□□ -2.21
KDM3A-213ENST00000488971 WFDC13Q8IUB5 93 aa1.23□□□□□ -2.21
KDM3A-213ENST00000488971 ALMS1Q8TCU4 4167 aa1.23□□□□□ -2.21
KDM3A-213ENST00000488971 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
KDM3A-213ENST00000488971 SPRR1BP22528 89 aa1.22□□□□□ -2.21
KDM3A-213ENST00000488971 WFDC10BQ8IUB3 73 aa1.22□□□□□ -2.21
KDM3A-213ENST00000488971 TOMM7Q9P0U1 55 aa1.22□□□□□ -2.21
KDM3A-213ENST00000488971 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
KDM3A-213ENST00000488971 PLCE1Q9P212 2302 aa1.21□□□□□ -2.22
KDM3A-213ENST00000488971 A8MTW9 85 aa1.2□□□□□ -2.22
KDM3A-213ENST00000488971 APELAP0DMC3 54 aa1.19□□□□□ -2.22
KDM3A-213ENST00000488971 PTPRZ1P23471 2315 aaPredicted RBP1.19□□□□□ -2.22
KDM3A-213ENST00000488971 KAAG1Q9UBP8 84 aa1.19□□□□□ -2.22
KDM3A-213ENST00000488971 PTPRQQ9UMZ3 2332 aa1.19□□□□□ -2.22
KDM3A-213ENST00000488971 ASH1LQ9NR48 2969 aaKnown RBP1.18□□□□□ -2.22
KDM3A-213ENST00000488971 KLK9Q2XQG4 91 aa1.18□□□□□ -2.22
KDM3A-213ENST00000488971 DEFB110Q30KQ9 67 aa1.18□□□□□ -2.22
KDM3A-213ENST00000488971 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
KDM3A-213ENST00000488971 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
KDM3A-213ENST00000488971 DEFB130BP0DP73 79 aa1.17□□□□□ -2.22
KDM3A-213ENST00000488971 DEFB130AP0DP74 79 aa1.17□□□□□ -2.22
KDM3A-213ENST00000488971 DEFB131AP59861 70 aa1.16□□□□□ -2.22
KDM3A-213ENST00000488971 DEFB1P60022 68 aa1.14□□□□□ -2.23
KDM3A-213ENST00000488971 CLPSL2Q6UWE3 100 aa1.14□□□□□ -2.23
KDM3A-213ENST00000488971 C2CD3Q4AC94 2353 aa1.14□□□□□ -2.23
KDM3A-213ENST00000488971 ZNF462Q96JM2 2506 aa1.12□□□□□ -2.23
KDM3A-213ENST00000488971 DEFB108BQ8NET1 73 aa1.12□□□□□ -2.23
KDM3A-213ENST00000488971 PDE4DIPQ5VU43 2346 aa1.11□□□□□ -2.23
KDM3A-213ENST00000488971 DEFB109BQ30KR1 87 aa1.11□□□□□ -2.23
KDM3A-213ENST00000488971 RHPN1-AS1Q9BWJ2 59 aa1.11□□□□□ -2.23
KDM3A-213ENST00000488971 UNC79Q9P2D8 2635 aa1.11□□□□□ -2.23
KDM3A-213ENST00000488971 FBN3Q75N90 2809 aa1.11□□□□□ -2.23
KDM3A-213ENST00000488971 SPTBN2O15020 2390 aa1.1□□□□□ -2.23
KDM3A-213ENST00000488971 CACNA1HO95180 2353 aa1.1□□□□□ -2.23
KDM3A-213ENST00000488971 CD52P31358 61 aa1.1□□□□□ -2.23
KDM3A-213ENST00000488971 WNK2Q9Y3S1 2297 aa1.1□□□□□ -2.23
KDM3A-213ENST00000488971 H3BUA1 57 aa1.09□□□□□ -2.23
KDM3A-213ENST00000488971 A0A0C4DFX4 3053 aa1.09□□□□□ -2.24
KDM3A-213ENST00000488971 HTN1P15515 57 aa1.08□□□□□ -2.24
KDM3A-213ENST00000488971 TTC28Q96AY4 2481 aa1.08□□□□□ -2.24
KDM3A-213ENST00000488971 PKDREJQ9NTG1 2253 aa1.08□□□□□ -2.24
KDM3A-213ENST00000488971 TENM1Q9UKZ4 2725 aa1.07□□□□□ -2.24
KDM3A-213ENST00000488971 PRLHP81277 87 aa1.07□□□□□ -2.24
KDM3A-213ENST00000488971 SPTBN1Q01082 2364 aaKnown RBP1.07□□□□□ -2.24
KDM3A-213ENST00000488971 Q9Y3F1 56 aa1.06□□□□□ -2.24
KDM3A-213ENST00000488971 MEGF8Q7Z7M0 2845 aa1.06□□□□□ -2.24
KDM3A-213ENST00000488971 SPINK1P00995 79 aa1.05□□□□□ -2.24
KDM3A-213ENST00000488971 S4R3F8 94 aa1.05□□□□□ -2.24
KDM3A-213ENST00000488971 ZNF292O60281 2723 aa1.05□□□□□ -2.24
KDM3A-213ENST00000488971 KNL1Q8NG31 2342 aa1.04□□□□□ -2.24
KDM3A-213ENST00000488971 H3BUX3 64 aa1.04□□□□□ -2.24
KDM3A-213ENST00000488971 POLQO75417 2590 aa1.04□□□□□ -2.24
KDM3A-213ENST00000488971 DEFB136Q30KP8 78 aa1.03□□□□□ -2.24
KDM3A-213ENST00000488971 NOP10Q9NPE3 64 aaKnown RBP1.03□□□□□ -2.24
KDM3A-213ENST00000488971 REV3LO60673 3130 aa1.02□□□□□ -2.25
KDM3A-213ENST00000488971 CHD7Q9P2D1 2997 aa1.02□□□□□ -2.25
KDM3A-213ENST00000488971 GVINP1Q7Z2Y8 2422 aa1.01□□□□□ -2.25
KDM3A-213ENST00000488971 IGF2RP11717 2491 aa1.01□□□□□ -2.25
KDM3A-213ENST00000488971 TPRP12270 2363 aaKnown RBP1.01□□□□□ -2.25
KDM3A-213ENST00000488971 WNK1Q9H4A3 2382 aa1.01□□□□□ -2.25
KDM3A-213ENST00000488971 ANK2Q01484 3957 aa1□□□□□ -2.25
KDM3A-213ENST00000488971 COL6A3P12111 3177 aa1□□□□□ -2.25
KDM3A-213ENST00000488971 DEFB133Q30KQ1 61 aa1□□□□□ -2.25
KDM3A-213ENST00000488971 MGAQ8IWI9 3026 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 WDR87Q6ZQQ6 2873 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 PCNX1Q96RV3 2341 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 ABCA12Q86UK0 2595 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 CHD9Q3L8U1 2897 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 ABCA2Q9BZC7 2435 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 F8P00451 2351 aa0.99□□□□□ -2.25
KDM3A-213ENST00000488971 CEP350Q5VT06 3117 aa0.98□□□□□ -2.25
KDM3A-213ENST00000488971 CHD6Q8TD26 2715 aa0.98□□□□□ -2.25
KDM3A-213ENST00000488971 OTOGQ6ZRI0 2925 aa0.98□□□□□ -2.25
KDM3A-213ENST00000488971 CSMD3Q7Z407 3707 aa0.98□□□□□ -2.25
KDM3A-213ENST00000488971 TRANK1O15050 2925 aa0.97□□□□□ -2.25
KDM3A-213ENST00000488971 DSPP15924 2871 aaKnown RBP0.97□□□□□ -2.25
KDM3A-213ENST00000488971 A0A096LNI7 61 aa0.97□□□□□ -2.25
KDM3A-213ENST00000488971 A0A096LPF7 62 aa0.97□□□□□ -2.25
KDM3A-213ENST00000488971 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
KDM3A-213ENST00000488971 TENM2Q9NT68 2774 aa0.96□□□□□ -2.26
KDM3A-213ENST00000488971 CELSR2Q9HCU4 2923 aa0.95□□□□□ -2.26
KDM3A-213ENST00000488971 CSPG4Q6UVK1 2322 aa0.95□□□□□ -2.26
KDM3A-213ENST00000488971 FBN2P35556 2912 aa0.94□□□□□ -2.26
KDM3A-213ENST00000488971 CFAP54Q96N23 3096 aa0.94□□□□□ -2.26
KDM3A-213ENST00000488971 DEFB135Q30KP9 77 aa0.94□□□□□ -2.26
KDM3A-213ENST00000488971 TNRC18O15417 2968 aaPredicted RBP0.93□□□□□ -2.26
KDM3A-213ENST00000488971 U3KQA8 63 aa0.93□□□□□ -2.26
KDM3A-213ENST00000488971 AKAP6Q13023 2319 aa0.93□□□□□ -2.26
KDM3A-213ENST00000488971 NBEAQ8NFP9 2946 aa0.92□□□□□ -2.26
KDM3A-213ENST00000488971 ZNF469Q96JG9 3925 aaPredicted RBP0.92□□□□□ -2.26
KDM3A-213ENST00000488971 H3BNG1 76 aa0.92□□□□□ -2.26
KDM3A-213ENST00000488971 M0QZ58 72 aa0.92□□□□□ -2.26
KDM3A-213ENST00000488971 LINC01556Q5JQF7 62 aa0.92□□□□□ -2.26
KDM3A-213ENST00000488971 DEFB124Q8NES8 71 aa0.92□□□□□ -2.26
KDM3A-213ENST00000488971 SRCAPQ6ZRS2 3230 aa0.92□□□□□ -2.26
KDM3A-213ENST00000488971 ZZEF1O43149 2961 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms