RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, human

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL16A1-215	ENST00000488897	SPRR1A	P35321	89 aa		11.68	□□□□□ -0.54
COL16A1-215	ENST00000488897	SERP1	Q9Y6X1	66 aa		11.68	□□□□□ -0.54
COL16A1-215	ENST00000488897	ERC2-IT1	O76042	136 aa		11.67	□□□□□ -0.54
COL16A1-215	ENST00000488897	EPPK1	P58107	5090 aa	Known RBP	11.67	□□□□□ -0.54
COL16A1-215	ENST00000488897	C5orf47	Q569G3	176 aa		11.67	□□□□□ -0.54
COL16A1-215	ENST00000488897		Q8N9L7	120 aa		11.67	□□□□□ -0.54
COL16A1-215	ENST00000488897		Q9BRP9	147 aa		11.67	□□□□□ -0.54
COL16A1-215	ENST00000488897	FAM168B	A1KXE4	195 aa		11.66	□□□□□ -0.54
COL16A1-215	ENST00000488897		F8WEM9	126 aa		11.66	□□□□□ -0.54
COL16A1-215	ENST00000488897	HECTD4	Q9Y4D8	3996 aa		11.65	□□□□□ -0.54
COL16A1-215	ENST00000488897	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.64	□□□□□ -0.55
COL16A1-215	ENST00000488897	EPM2A	B3EWF7	344 aa		11.64	□□□□□ -0.55
COL16A1-215	ENST00000488897	C1orf137	Q5JT78	98 aa		11.62	□□□□□ -0.55
COL16A1-215	ENST00000488897	TMEM254	Q8TBM7	123 aa		11.62	□□□□□ -0.55
COL16A1-215	ENST00000488897		Q5XG85	94 aa		11.61	□□□□□ -0.55
COL16A1-215	ENST00000488897	MRPL55	Q7Z7F7	128 aa	Known RBP	11.61	□□□□□ -0.55
COL16A1-215	ENST00000488897		A0A1W2PNM2	257 aa		11.61	□□□□□ -0.55
COL16A1-215	ENST00000488897	KRTAP7-1	Q8IUC3	87 aa		11.61	□□□□□ -0.55
COL16A1-215	ENST00000488897	LRCOL1	A6NCL2	159 aa		11.6	□□□□□ -0.55
COL16A1-215	ENST00000488897	OCR1	Q9BZK8	76 aa		11.6	□□□□□ -0.55
COL16A1-215	ENST00000488897	DNAH5	Q8TE73	4624 aa		11.6	□□□□□ -0.55
COL16A1-215	ENST00000488897	ATP5E	P56381	51 aa	Predicted RBP	11.59	□□□□□ -0.55
COL16A1-215	ENST00000488897	ST20-AS1	Q8NBB2	130 aa		11.59	□□□□□ -0.55
COL16A1-215	ENST00000488897		Q8NBF4	154 aa		11.59	□□□□□ -0.55
COL16A1-215	ENST00000488897	KRTAP10-2	P60368	255 aa		11.57	□□□□□ -0.56
COL16A1-215	ENST00000488897	C4orf26	Q17RF5	130 aa		11.57	□□□□□ -0.56
COL16A1-215	ENST00000488897		A0A087WTM6	91 aa		11.57	□□□□□ -0.56
COL16A1-215	ENST00000488897	SPRR4	Q96PI1	79 aa		11.57	□□□□□ -0.56
COL16A1-215	ENST00000488897	UBE2B	P63146	152 aa		11.56	□□□□□ -0.56
COL16A1-215	ENST00000488897	REG3G	Q6UW15	175 aa		11.55	□□□□□ -0.56
COL16A1-215	ENST00000488897		A0A0U1RQV1	116 aa		11.53	□□□□□ -0.56
COL16A1-215	ENST00000488897	HRCT1	Q6UXD1	115 aa		11.5	□□□□□ -0.57
COL16A1-215	ENST00000488897	SMIM26	A0A096LP01	95 aa		11.5	□□□□□ -0.57
COL16A1-215	ENST00000488897	SMIM29	Q86T20	159 aa		11.48	□□□□□ -0.57
COL16A1-215	ENST00000488897	DYNC1H1	Q14204	4646 aa	Known RBP	11.47	□□□□□ -0.57
COL16A1-215	ENST00000488897	LRP1B	Q9NZR2	4599 aa		11.46	□□□□□ -0.57
COL16A1-215	ENST00000488897	DSCR10	P59022	87 aa		11.46	□□□□□ -0.58
COL16A1-215	ENST00000488897	C16orf90	A8MZG2	172 aa		11.45	□□□□□ -0.58
COL16A1-215	ENST00000488897	FAM30A	Q9NZY2	134 aa		11.45	□□□□□ -0.58
COL16A1-215	ENST00000488897		A0A1B0GVY2	172 aa		11.44	□□□□□ -0.58
COL16A1-215	ENST00000488897	HIGD2A	Q9BW72	106 aa		11.44	□□□□□ -0.58
COL16A1-215	ENST00000488897		A0A096LNI7	61 aa		11.42	□□□□□ -0.58
COL16A1-215	ENST00000488897	CNBP	P62633	177 aa	Known RBP	11.42	□□□□□ -0.58
COL16A1-215	ENST00000488897	IGLV5-52	A0A0A0MRZ9	124 aa		11.41	□□□□□ -0.58
COL16A1-215	ENST00000488897		K7EQZ3	153 aa		11.4	□□□□□ -0.58
COL16A1-215	ENST00000488897	IGFL1	Q6UW32	110 aa		11.4	□□□□□ -0.58
COL16A1-215	ENST00000488897	FP248	Q71RG6	208 aa	Predicted RBP	11.4	□□□□□ -0.58
COL16A1-215	ENST00000488897	IGKV2-24	A0A0C4DH68	120 aa		11.39	□□□□□ -0.59
COL16A1-215	ENST00000488897	IGLV8-61	A0A075B6I0	122 aa		11.39	□□□□□ -0.59
COL16A1-215	ENST00000488897		A0A1W2PNN7	141 aa		11.39	□□□□□ -0.59
COL16A1-215	ENST00000488897	PANO1	I0J062	215 aa		11.39	□□□□□ -0.59
COL16A1-215	ENST00000488897	LINC00336	Q6ZUF6	198 aa		11.39	□□□□□ -0.59
COL16A1-215	ENST00000488897	CHTF8	P0CG12	524 aa		11.38	□□□□□ -0.59
COL16A1-215	ENST00000488897	PRLH	P81277	87 aa		11.38	□□□□□ -0.59
COL16A1-215	ENST00000488897	KRTAP10-1	P60331	282 aa		11.37	□□□□□ -0.59
COL16A1-215	ENST00000488897	HCG22	E2RYF7	251 aa		11.36	□□□□□ -0.59
COL16A1-215	ENST00000488897	DNAH8	Q96JB1	4490 aa		11.36	□□□□□ -0.59
COL16A1-215	ENST00000488897	KIAA1109	Q2LD37	5005 aa		11.34	□□□□□ -0.59
COL16A1-215	ENST00000488897	C14orf177	Q52M58	125 aa		11.34	□□□□□ -0.59
COL16A1-215	ENST00000488897		A0A0G2JQZ4	141 aa		11.33	□□□□□ -0.6
COL16A1-215	ENST00000488897	LINC00474	Q9P2X8	69 aa		11.33	□□□□□ -0.6
COL16A1-215	ENST00000488897	UBE2A	P49459	152 aa		11.32	□□□□□ -0.6
COL16A1-215	ENST00000488897	C9orf163	Q8N9P6	203 aa		11.32	□□□□□ -0.6
COL16A1-215	ENST00000488897		A0A087WSZ3	146 aa		11.31	□□□□□ -0.6
COL16A1-215	ENST00000488897	ZCCHC13	Q8WW36	166 aa	Known RBP	11.31	□□□□□ -0.6
COL16A1-215	ENST00000488897	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.31	□□□□□ -0.6
COL16A1-215	ENST00000488897		H0Y9J4	135 aa		11.29	□□□□□ -0.6
COL16A1-215	ENST00000488897	APOB	P04114	4563 aa	Known RBP	11.29	□□□□□ -0.6
COL16A1-215	ENST00000488897	SPRR1B	P22528	89 aa		11.27	□□□□□ -0.6
COL16A1-215	ENST00000488897	DEFB116	Q30KQ4	102 aa		11.27	□□□□□ -0.61
COL16A1-215	ENST00000488897	FAM229B	Q4G0N7	80 aa		11.27	□□□□□ -0.61
COL16A1-215	ENST00000488897	PHF5A	Q7RTV0	110 aa	Known RBP	11.27	□□□□□ -0.61
COL16A1-215	ENST00000488897	PKIG	Q9Y2B9	76 aa		11.25	□□□□□ -0.61
COL16A1-215	ENST00000488897	FAT1	Q14517	4588 aa		11.25	□□□□□ -0.61
COL16A1-215	ENST00000488897	WFDC13	Q8IUB5	93 aa		11.23	□□□□□ -0.61
COL16A1-215	ENST00000488897	KRTAP11-1	Q8IUC1	163 aa		11.23	□□□□□ -0.61
COL16A1-215	ENST00000488897	hDV103S1	A0JD37	113 aa		11.21	□□□□□ -0.61
COL16A1-215	ENST00000488897	PRO0628	Q9UI54	55 aa		11.21	□□□□□ -0.61
COL16A1-215	ENST00000488897	NDUFB1	O75438	58 aa		11.2	□□□□□ -0.62
COL16A1-215	ENST00000488897	SMR3B	P02814	79 aa	Predicted RBP	11.19	□□□□□ -0.62
COL16A1-215	ENST00000488897	MP68	P56378	58 aa		11.19	□□□□□ -0.62
COL16A1-215	ENST00000488897	RPL37A	P61513	92 aa	Known RBP	11.19	□□□□□ -0.62
COL16A1-215	ENST00000488897	MPLKIP	Q8TAP9	179 aa		11.19	□□□□□ -0.62
COL16A1-215	ENST00000488897	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.18	□□□□□ -0.62
COL16A1-215	ENST00000488897	HSPG2	P98160	4391 aa		11.18	□□□□□ -0.62
COL16A1-215	ENST00000488897	KRTAP17-1	Q9BYP8	105 aa		11.18	□□□□□ -0.62
COL16A1-215	ENST00000488897	PRR15	Q8IV56	129 aa		11.17	□□□□□ -0.62
COL16A1-215	ENST00000488897	CIRBP-AS1	Q8TBR5	109 aa		11.17	□□□□□ -0.62
COL16A1-215	ENST00000488897	C1orf64	Q8NEQ6	169 aa		11.16	□□□□□ -0.62
COL16A1-215	ENST00000488897	CYP4F30P	Q9H0H9	118 aa		11.16	□□□□□ -0.62
COL16A1-215	ENST00000488897	LINC00472	Q9H8W2	130 aa		11.16	□□□□□ -0.62
COL16A1-215	ENST00000488897		A8MWP4	228 aa		11.15	□□□□□ -0.62
COL16A1-215	ENST00000488897	RYR1	P21817	5038 aa		11.15	□□□□□ -0.62
COL16A1-215	ENST00000488897	CASC2	Q6XLA1	102 aa		11.15	□□□□□ -0.63
COL16A1-215	ENST00000488897	SPACA4	Q8TDM5	124 aa		11.15	□□□□□ -0.63
COL16A1-215	ENST00000488897	BIRC6	Q9NR09	4857 aa		11.14	□□□□□ -0.63
COL16A1-215	ENST00000488897	SRRM2	Q9UQ35	2752 aa	Known RBP	11.12	□□□□□ -0.63
COL16A1-215	ENST00000488897	TRAV22	A0A0B4J277	110 aa		11.11	□□□□□ -0.63
COL16A1-215	ENST00000488897		H3BPC8	53 aa		11.11	□□□□□ -0.63
COL16A1-215	ENST00000488897		Q6ZSA8	131 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms